Click here to switch to the map view.

The map label for this gene is oorB [H]

Identifier: 108562995

GI number: 108562995

Start: 587411

End: 588232

Strand: Direct

Name: oorB [H]

Synonym: HPAG1_0570

Alternate gene names: 108562995

Gene position: 587411-588232 (Clockwise)

Preceding gene: 108562994

Following gene: 108562996

Centisome position: 36.8

GC content: 44.4

Gene sequence:

>822_bases
ATGGCGTTTAATTATGATGAATATTTGCGTGTGGATAAAATACCCACTTTGTGGTGTTGGGGCTGTGGCGATGGCGTGAT
TTTGAAATCCATTATCCGCACGATTGACGCTTTAGGTTGGAAAATGGATGATGTGTGTTTGGTGAGTGGGATTGGTTGCA
GCGGGCGCATGAGTTCGTATGTGAATTGCAACACCGTTCACACCACGCATGGTAGGGCTGTGGCGTATGCGACAGGGATT
AAAATGGCTAACCCCAGTAAGCATGTGATCGTGGTTTCTGGCGATGGCGATGGCTTTGCGATTGGAGGCAATCACACCAT
GCATGCATGCAGAAGAAACATTGATTTGAATTTTATTTTAGTGAATAATTTCATTTATGGTTTGACCAACTCCCAAACTT
CGCCCACCACGCCTAATGGCATGTGGACGGTTACGGCTCAATGGGGGAATATTGACAACCAATTTGACCCATGCGCTTTA
ACCACCGCTGCAGGGGCGAGCTTTGTGGCCAGAGAGAGCGTTTTAGACCCTCAAAAATTAGAAAAAGTGCTTAAAGAAGG
TTTCTCGCACAAGGGTTTTAGCTTCTTTGATGTCCATAGCAATTGCCATATCAATTTAGGGCGTAAGAATAAAATGGGCG
AAGCGTCTCAAATGCTAAAATGGATGGAAAGCCGGTTAGTGAGCAAACGCCAGTTTGAAGCCATGAGTCCTGAAGAAAGG
GTGGATAAATTCCCTACAGGCGTTTTAAAGCATGACATGGACAGGAAAGAATATTGCGAAGCGTATCAAGAAATCATTGA
AAAAGCACAAGGAAAACAATAA

Upstream 100 bases:

>100_bases
ATTGAAAGGGCTATGCAAAGAGAGGTGCATTTCTTTGGGCAAGCCAATGGGCGCACGATTTCGCCCAAACAAATCATCGC
AAAGTTGAAGGAGCTTTAAA

Downstream 100 bases:

>100_bases
TGGAAGCGCAGTTACGATTTACAGGCGTTGGAGGGCAAGGCGTGTTGTTAGCGGGAGAGATTTTAGCTGAGGCTAAGATC
GTGAGTGGGGGCTATGGCAC

Product: 2-oxoglutarate-acceptor oxidoreductase subunit OorB

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGI
KMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCAL
TTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEER
VDKFPTGVLKHDMDRKEYCEAYQEIIEKAQGKQ

Sequences:

>Translated_273_residues
MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGI
KMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCAL
TTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEER
VDKFPTGVLKHDMDRKEYCEAYQEIIEKAQGKQ
>Mature_272_residues
AFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIK
MANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALT
TAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERV
DKFPTGVLKHDMDRKEYCEAYQEIIEKAQGKQ

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 30445; Mature: 30314

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSY
CCCCHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFIL
EECCEEEECCCCEEEEEECEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCEEEEE
VNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKL
ECCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHCCCHHHHHHHCCCHHHH
EKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEER
HHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VDKFPTGVLKHDMDRKEYCEAYQEIIEKAQGKQ
HHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSY
CCCHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
VNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFIL
EECCEEEECCCCEEEEEECEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHCCCEEEEE
VNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKL
ECCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHCCCHHHHHHHCCCHHHH
EKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEER
HHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
VDKFPTGVLKHDMDRKEYCEAYQEIIEKAQGKQ
HHHCCCCHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9108258 [H]