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The map label for this gene is oorC [H]

Identifier: 108562996

GI number: 108562996

Start: 588232

End: 588786

Strand: Direct

Name: oorC [H]

Synonym: HPAG1_0571

Alternate gene names: 108562996

Gene position: 588232-588786 (Clockwise)

Preceding gene: 108562995

Following gene: 108562997

Centisome position: 36.85

GC content: 41.98

Gene sequence:

>555_bases
ATGGAAGCGCAGTTACGATTTACAGGCGTTGGAGGGCAAGGCGTGTTGTTAGCGGGAGAGATTTTAGCTGAGGCTAAGAT
CGTGAGTGGGGGCTATGGCACTAAGACTTCCACCTATACTTCGCAAGTGCGTGGAGGGCCCACTAAAGTGGATATTTTGC
TAGACAAAGATGAAATCATTTTCCCTTATGCTAAAGAGGGCGAGATTGATTTCATGCTTTCAGTCGCTCAAATCAGCTAC
AACCAGTTTAAAAGCGACATTAAAAAAGGCGGTATCGTTGTCATTGATCCCAATCTAGTAACCCCCACTAAAGAAGATGA
GGAAAAATACCAGCTTTATAAAATCCCCATTATCAGCATCGCTAAAGATGAAGTGGGTAACATTATCACGCAATCTGTGG
TAGCGTTAGCGATTACCGTGGAGCTTACTAAATGCGTAGAAGAAAATATCGTGCTAGACACCATGCTTAAAAAAGTCCCT
GCAAAAGTCGCTGACACGAACAAAAAAGCCTTTGAAATTGGCAAAAAACATGCTTTAGAAGCTTTGAAAAAATAA

Upstream 100 bases:

>100_bases
TGGATAAATTCCCTACAGGCGTTTTAAAGCATGACATGGACAGGAAAGAATATTGCGAAGCGTATCAAGAAATCATTGAA
AAAGCACAAGGAAAACAATA

Downstream 100 bases:

>100_bases
GGGGGTAACTCCTTATCTTATTTTTCTTTAGCTATAGCTTTTTCCCCTTTTCTTGTATTTTTGAAAAAAAAAAATGATAT
AATGCTCAAATTTTACAAAG

Product: 2-oxoglutarate-acceptor oxidoreductase subunit OorC

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase gamma chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit gamma [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISY
NQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVP
AKVADTNKKAFEIGKKHALEALKK

Sequences:

>Translated_184_residues
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISY
NQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVP
AKVADTNKKAFEIGKKHALEALKK
>Mature_184_residues
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISY
NQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVP
AKVADTNKKAFEIGKKHALEALKK

Specific function: Unknown

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011894
- InterPro:   IPR019752
- InterPro:   IPR002869 [H]

Pfam domain/function: PF01558 POR [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 20032; Mature: 20032

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEII
CCCEEEEEECCCCCEEEEHHHHHHEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCEE
FPYAKEGEIDFMLSVAQISYNQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISI
ECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEECCCEECCCCCCCCCEEEEEEEEEEE
AKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHH
ALKK
HHCC
>Mature Secondary Structure
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEII
CCCEEEEEECCCCCEEEEHHHHHHEEEEECCCCCCCCCCHHHHCCCCEEEEEEECCCCEE
FPYAKEGEIDFMLSVAQISYNQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISI
ECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCEEEECCCEECCCCCCCCCEEEEEEEEEEE
AKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHH
ALKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]