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The map label for this gene is oorD

Identifier: 108562993

GI number: 108562993

Start: 585941

End: 586282

Strand: Direct

Name: oorD

Synonym: HPAG1_0568

Alternate gene names: NA

Gene position: 585941-586282 (Clockwise)

Preceding gene: 108562991

Following gene: 108562994

Centisome position: 36.7

GC content: 45.32

Gene sequence:

>342_bases
ATGGCTAAAATGAGCGCTCCAGATGGGGTTGCCGTTTGGGTGAATGAAGACAGGTGTAAGGGTTGTGATATTTGCGTATC
GGTATGCCCTGCTGGGGTTCTTGGCATGGGGATTGAAAAAGAAAGGGTGCTTGGAAAAGTGGCCAAAGTAGCCTACCCAG
AGAGTTGTATCGGTTGTGTGCAATGCGAGTTGCACTGCCCGGATTTTGCGATTTATGTGGCTGACAGGAAGGATTTCAAA
TTCGCTAAAGTTTCTAAAGAAGCCCAAGAAAGAAGCGAAAAGGTTAAGGCCAATAAATACATGCTCTTAGAAGAGACTAT
TTTAGAAGGGAGAGGCAAGTAA

Upstream 100 bases:

>100_bases
TTAAAGCATTTTAGATTTTATTAAAAAAGGCTTGCTACAATTTTAGGCAAATTTTGATTGCTAGGGCTTTAAATGCAGCT
TTTAGCACAAAGGAGAATGA

Downstream 100 bases:

>100_bases
TGCGTGAGATTATTTCTGATGGGAATGAATTAGTCGCTAAAGCGGCGATTGAAGTGGGGTGTCGGTTTTTTGGGGGCTAT
CCTATCACGCCAAGTTCGGA

Product: 2-oxoglutarate-acceptor oxidoreductase subunit OorD

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: 2-Oxoglutarate Ferredoxin Oxidoreductase Subunit Delta; OORD Subunit Of 2-OxoglutarateAcceptor Oxidoreductase; 2-Oxoglutarate Ferredoxin Oxidoreductase Delta Subunit; OorD Subunit Of 2-OxoglutarateAcceptor Oxidoreductase; 2-OxoglutarateAcceptor Oxidoreductase Subunit OorD; 2-OxoglutarateAcceptor Oxidoreductase OorD Subunit

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAKMSAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFK
FAKVSKEAQERSEKVKANKYMLLEETILEGRGK

Sequences:

>Translated_113_residues
MAKMSAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFK
FAKVSKEAQERSEKVKANKYMLLEETILEGRGK
>Mature_112_residues
AKMSAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKF
AKVSKEAQERSEKVKANKYMLLEETILEGRGK

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.3

Molecular weight: Translated: 12419; Mature: 12287

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKMSAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCV
CCCCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCHHHEEE
QCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
EEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCCC
>Mature Secondary Structure 
AKMSAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCV
CCCCCCCCEEEEEECCCCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCHHHEEE
QCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
EEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA