Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is yceG [C]

Identifier: 108562991

GI number: 108562991

Start: 584767

End: 585756

Strand: Direct

Name: yceG [C]

Synonym: HPAG1_0566

Alternate gene names: 108562991

Gene position: 584767-585756 (Clockwise)

Preceding gene: 108562971

Following gene: 108562993

Centisome position: 36.63

GC content: 37.88

Gene sequence:

>990_bases
ATGACAACTAAAAGAGTGAATACTGCCACAAACAAGATAATGACATTAAATACTTTCTTGGATACATGTTTTCTTTTGTT
CATTAGTATTCTTTTTTACTTAAGTATACCAATTTATCCTAACAAAGTGGTGGTTGTCCCGCAAGGTTCGCTCAAAAAAG
TGTTTTTTTCTTTAAAAGAGCAAGGCGTGGATATGAACGCTTTGGATTTGCTTTTTTTACGCCTGATGGGCATGCCTAAA
AAAGGTTATATTGATATGGGCGATGGGGCTTTAAGAAAGGGGGATTTTTTAGTCCGTTTGATTAAAGCAAAAGCGGCGCA
AAAAAGCGCGACTCTAATCCCTGGAGAAAGCCGTTATTTTTTCATGCAAATTTTGAGCGAGACTTACCAACTAGAAACAA
GCGATCTCAATCAGGCTTATGAAAGCATCGCTCCACGATTGAACGGCGCTGTGATAGAAGATGGGGTGATATGGCCAGAC
ACTTATCATTTGCCTTTAGGGGAGGACGCTTTTAAAATCATGCAAACTTTGATTGGTCAATCCATGAAAAAACACGAAGC
TTTAAGCAAACAATGGCTTGGATACTACCATAAAGAAGAGTGGTTTGAAAAAATCATTCTCGCTTCTATTGTGCAAAAAG
AAGCCGCTAATACTGAAGAAATGCCCTTGATTGCGAGCGTGATTTTTAACCGCTTGAGAAAAGGCATGCCTTTGCAAATG
GATGGGGCTTTGAATTATCAGGAATTTTCACACGCTAAAGTAACCAAAGAGCGCATTAAAACCGATAACACCCCCTATAA
CACCTATAAATTTAAGGGCTTGCCTAAAAATCCTGTAGGGAGCGTGAGCCTAGAAGCGATTAGAGCCGTGGTTTTCCCTA
AAAAAACGGATTTCTTGTATTTTGTGAAAATGCCGGATAAAAAACATGCTTTCAGTGCGACTTATAAAAAGCATTTAAAA
AACATTAATCTTTCTAATAATCATTTTTAA

Upstream 100 bases:

>100_bases
TAAAGAAAGCTTGTTGTTAAGTTTTAAGTATAATTCAGAAATGCCAAGCTTCCCGATTTTTAAATTTTGTATGTGAATGC
CGTTTGAAAGGGTTTTGTGA

Downstream 100 bases:

>100_bases
GATTAAGGTAAATGGGGCGTTTTTTCTTTTAAATTGGGTAAAAAGTGTTTAGTATTTTCTCATTTTAATTTTAAGTTCTT
ACTATTAAAGCATTTTAGAT

Product: aminodeoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTTKRVNTATNKIMTLNTFLDTCFLLFISILFYLSIPIYPNKVVVVPQGSLKKVFFSLKEQGVDMNALDLLFLRLMGMPK
KGYIDMGDGALRKGDFLVRLIKAKAAQKSATLIPGESRYFFMQILSETYQLETSDLNQAYESIAPRLNGAVIEDGVIWPD
TYHLPLGEDAFKIMQTLIGQSMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANTEEMPLIASVIFNRLRKGMPLQM
DGALNYQEFSHAKVTKERIKTDNTPYNTYKFKGLPKNPVGSVSLEAIRAVVFPKKTDFLYFVKMPDKKHAFSATYKKHLK
NINLSNNHF

Sequences:

>Translated_329_residues
MTTKRVNTATNKIMTLNTFLDTCFLLFISILFYLSIPIYPNKVVVVPQGSLKKVFFSLKEQGVDMNALDLLFLRLMGMPK
KGYIDMGDGALRKGDFLVRLIKAKAAQKSATLIPGESRYFFMQILSETYQLETSDLNQAYESIAPRLNGAVIEDGVIWPD
TYHLPLGEDAFKIMQTLIGQSMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANTEEMPLIASVIFNRLRKGMPLQM
DGALNYQEFSHAKVTKERIKTDNTPYNTYKFKGLPKNPVGSVSLEAIRAVVFPKKTDFLYFVKMPDKKHAFSATYKKHLK
NINLSNNHF
>Mature_328_residues
TTKRVNTATNKIMTLNTFLDTCFLLFISILFYLSIPIYPNKVVVVPQGSLKKVFFSLKEQGVDMNALDLLFLRLMGMPKK
GYIDMGDGALRKGDFLVRLIKAKAAQKSATLIPGESRYFFMQILSETYQLETSDLNQAYESIAPRLNGAVIEDGVIWPDT
YHLPLGEDAFKIMQTLIGQSMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANTEEMPLIASVIFNRLRKGMPLQMD
GALNYQEFSHAKVTKERIKTDNTPYNTYKFKGLPKNPVGSVSLEAIRAVVFPKKTDFLYFVKMPDKKHAFSATYKKHLKN
INLSNNHF

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=237, Percent_Identity=28.6919831223629, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 37604; Mature: 37472

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKRVNTATNKIMTLNTFLDTCFLLFISILFYLSIPIYPNKVVVVPQGSLKKVFFSLKE
CCCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH
QGVDMNALDLLFLRLMGMPKKGYIDMGDGALRKGDFLVRLIKAKAAQKSATLIPGESRYF
CCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCHHH
FMQILSETYQLETSDLNQAYESIAPRLNGAVIEDGVIWPDTYHLPLGEDAFKIMQTLIGQ
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHH
SMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANTEEMPLIASVIFNRLRKGMPLQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEE
DGALNYQEFSHAKVTKERIKTDNTPYNTYKFKGLPKNPVGSVSLEAIRAVVFPKKTDFLY
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEE
FVKMPDKKHAFSATYKKHLKNINLSNNHF
EEECCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TTKRVNTATNKIMTLNTFLDTCFLLFISILFYLSIPIYPNKVVVVPQGSLKKVFFSLKE
CCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHH
QGVDMNALDLLFLRLMGMPKKGYIDMGDGALRKGDFLVRLIKAKAAQKSATLIPGESRYF
CCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCHHH
FMQILSETYQLETSDLNQAYESIAPRLNGAVIEDGVIWPDTYHLPLGEDAFKIMQTLIGQ
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCEECCCCCCCCCCHHHHHHHHHHHHH
SMKKHEALSKQWLGYYHKEEWFEKIILASIVQKEAANTEEMPLIASVIFNRLRKGMPLQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEE
DGALNYQEFSHAKVTKERIKTDNTPYNTYKFKGLPKNPVGSVSLEAIRAVVFPKKTDFLY
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEE
FVKMPDKKHAFSATYKKHLKNINLSNNHF
EEECCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]