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The map label for this gene is 108562984

Identifier: 108562984

GI number: 108562984

Start: 576635

End: 577753

Strand: Reverse

Name: 108562984

Synonym: HPAG1_0559

Alternate gene names: NA

Gene position: 577753-576635 (Counterclockwise)

Preceding gene: 108562985

Following gene: 108562983

Centisome position: 36.19

GC content: 39.32

Gene sequence:

>1119_bases
TTGGAACCTTCAAGAAATCGCCTAAAGCATGCCGCCTTTTTTGTGGGGCTTTTTATCGTTTTATTTTTAATTGTAATGAA
GCACCAAACCCCCCCCTATGCTTTTATGCACAATCAAACCCTTTCAACTGAAAGCCCCCCCTATTTCACACAGCTCACTA
TCCCTAAACCAGATGACGCTTTAAGCGTGCATGCGAGCGCTTTAATCAGCTTGCCTAACGATAACCTCTTGAGCGCTTAT
TTTAGCGGCACTAAAGAAGGGGCAAAAGATGTGAAAATCAGCGCGAATCTTTTTGATGGCAAGACTAATCGCTGGAGCGA
AGCCTTCATTCTTTTAACCAAAGAAGAGCTTTCCAAAAACGCGCATGAATACATCAAAAAACTGGGTAACCCCTTGCTTT
TTTTGCATGACGATAAAATCTTGTTGTTTGTCGTAGGGGTGAGCATGGGCGGATGGGCCACTTCTAAAATCTATCAACTT
GAAAGCGCTTTAGAGCCGATTCGTTTTAAGTTTGCGCGAAAACTCTCTTTAAGCCCTTTTTTAAACTTAAGCCATTTGAT
AAAAAATAAACCTTTAAATACCACTGATGGCGGGTTTATGCTACCGCTCTATCACGAATTAGCCACCCAATACACATTAT
TGTTGAAATTTGACAAAAACAATAACCCAAGAGAGCTTTTAAGGCCTAATGCCCTAAACCACCAGCTCCAGCCAAGCCTA
ACCCCCTTTAAAGATTGCGCCATCATGGCGTTTAGAAACCATTCTTTTAAAGATAGCCTCATGCTAGAAACCTGTAAAAC
CCCCACCGCTTGGCAAAAACCCATGCTTACGAATTTGAAAAACTTGAATGACGCTTTGAATTTGATCAATTTAAACAAAG
AATTGTATTTGATCCACAACCCTAGCGATTTATCTTTGCGTCGTAAAGAACTCCTACTTTCTAAACTAGAAAACCCAAAC
TCTTTTAAAACCTTAAAGATTTTAGATAAAGCAAATGAAGTGAGTTACCCAAGCTATAGTCTTAATCCTCATTTTATAGA
TATTGTCTATACCTACAACCGCTCTCATATCAAACACATCCGTTTTAATATGGCTTATTTAAAATCCCTTCTCAAGTGA

Upstream 100 bases:

>100_bases
GTAAAAAAGCGCGTTTGTCTAAAAAACCCTTTATAGTCCCTACACACGCACTTTGTTTGAATGAAAAAATCGCTATCTTA
AGAGGGGGCGAAACGCTATC

Downstream 100 bases:

>100_bases
TTAATGATGCTTATATCTTCTTCTTACACGCTGAGTTTTATATGGCTTTTTTTAATTTTCTTTTTTTTCAAAAATAAGCC
ATTGGGTTTAAGGTTTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: BNR/Asp-Box Repeat-Containing Protein; BNR/Asp-Box Repeat Protein; BNR/Asp Box Repeat-Containing Protein; Inner Membrane Protein

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MEPSRNRLKHAAFFVGLFIVLFLIVMKHQTPPYAFMHNQTLSTESPPYFTQLTIPKPDDALSVHASALISLPNDNLLSAY
FSGTKEGAKDVKISANLFDGKTNRWSEAFILLTKEELSKNAHEYIKKLGNPLLFLHDDKILLFVVGVSMGGWATSKIYQL
ESALEPIRFKFARKLSLSPFLNLSHLIKNKPLNTTDGGFMLPLYHELATQYTLLLKFDKNNNPRELLRPNALNHQLQPSL
TPFKDCAIMAFRNHSFKDSLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHNPSDLSLRRKELLLSKLENPN
SFKTLKILDKANEVSYPSYSLNPHFIDIVYTYNRSHIKHIRFNMAYLKSLLK

Sequences:

>Translated_372_residues
MEPSRNRLKHAAFFVGLFIVLFLIVMKHQTPPYAFMHNQTLSTESPPYFTQLTIPKPDDALSVHASALISLPNDNLLSAY
FSGTKEGAKDVKISANLFDGKTNRWSEAFILLTKEELSKNAHEYIKKLGNPLLFLHDDKILLFVVGVSMGGWATSKIYQL
ESALEPIRFKFARKLSLSPFLNLSHLIKNKPLNTTDGGFMLPLYHELATQYTLLLKFDKNNNPRELLRPNALNHQLQPSL
TPFKDCAIMAFRNHSFKDSLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHNPSDLSLRRKELLLSKLENPN
SFKTLKILDKANEVSYPSYSLNPHFIDIVYTYNRSHIKHIRFNMAYLKSLLK
>Mature_372_residues
MEPSRNRLKHAAFFVGLFIVLFLIVMKHQTPPYAFMHNQTLSTESPPYFTQLTIPKPDDALSVHASALISLPNDNLLSAY
FSGTKEGAKDVKISANLFDGKTNRWSEAFILLTKEELSKNAHEYIKKLGNPLLFLHDDKILLFVVGVSMGGWATSKIYQL
ESALEPIRFKFARKLSLSPFLNLSHLIKNKPLNTTDGGFMLPLYHELATQYTLLLKFDKNNNPRELLRPNALNHQLQPSL
TPFKDCAIMAFRNHSFKDSLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHNPSDLSLRRKELLLSKLENPN
SFKTLKILDKANEVSYPSYSLNPHFIDIVYTYNRSHIKHIRFNMAYLKSLLK

Specific function: Unknown

COG id: COG4692

COG function: function code G; Predicted neuraminidase (sialidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42660; Mature: 42660

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSRNRLKHAAFFVGLFIVLFLIVMKHQTPPYAFMHNQTLSTESPPYFTQLTIPKPDDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCH
LSVHASALISLPNDNLLSAYFSGTKEGAKDVKISANLFDGKTNRWSEAFILLTKEELSKN
HHEEEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHCCH
AHEYIKKLGNPLLFLHDDKILLFVVGVSMGGWATSKIYQLESALEPIRFKFARKLSLSPF
HHHHHHHHCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LNLSHLIKNKPLNTTDGGFMLPLYHELATQYTLLLKFDKNNNPRELLRPNALNHQLQPSL
CCHHHHHCCCCCCCCCCCEEHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCC
TPFKDCAIMAFRNHSFKDSLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHN
CCHHHEEEEEECCCCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHEEECCCEEEEEEC
PSDLSLRRKELLLSKLENPNSFKTLKILDKANEVSYPSYSLNPHFIDIVYTYNRSHIKHI
CCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHH
RFNMAYLKSLLK
HHHHHHHHHHHC
>Mature Secondary Structure
MEPSRNRLKHAAFFVGLFIVLFLIVMKHQTPPYAFMHNQTLSTESPPYFTQLTIPKPDDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCH
LSVHASALISLPNDNLLSAYFSGTKEGAKDVKISANLFDGKTNRWSEAFILLTKEELSKN
HHEEEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHCCH
AHEYIKKLGNPLLFLHDDKILLFVVGVSMGGWATSKIYQLESALEPIRFKFARKLSLSPF
HHHHHHHHCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LNLSHLIKNKPLNTTDGGFMLPLYHELATQYTLLLKFDKNNNPRELLRPNALNHQLQPSL
CCHHHHHCCCCCCCCCCCEEHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCC
TPFKDCAIMAFRNHSFKDSLMLETCKTPTAWQKPMLTNLKNLNDALNLINLNKELYLIHN
CCHHHEEEEEECCCCCCHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHEEECCCEEEEEEC
PSDLSLRRKELLLSKLENPNSFKTLKILDKANEVSYPSYSLNPHFIDIVYTYNRSHIKHI
CCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHH
RFNMAYLKSLLK
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA