Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562982

Identifier: 108562982

GI number: 108562982

Start: 574038

End: 576068

Strand: Reverse

Name: 108562982

Synonym: HPAG1_0557

Alternate gene names: NA

Gene position: 576068-574038 (Counterclockwise)

Preceding gene: 108562983

Following gene: 108562981

Centisome position: 36.09

GC content: 36.53

Gene sequence:

>2031_bases
ATGAAATCCCTATCCCATGCCCTTTTTTCGCTCTTTTTAAAAGGTTTTTATTTCACCTTTTTCATGAGCTTGTTGTTTGT
GTTTAATCGTATCGGCTTTATCCTTTATACTGGCTATTATAAACACGCTTTAAAAAACCCTATTTTTGATGAAATCATCA
AAACCCTATTCAATGGAGCCAGATACGATAATCGTGTGGTCTCAAGCTTAGCGATTCTTTTTATCCTCATCGGGTTATTA
GGGTTATTGGCCCCCAAACACCAAACCAAAATGCTTAATATTATGGCGTGTTTTTCTATCGCTATTATCCTGTTTTTAAA
CATTGCAAACATTGTTTATTATGGCATTTATGGGAATGTGTTTGATGAAAATTTATTGGAATTTCTGCATGAAGACACGC
TCACGATTTTAAAAATGAGTGGGGAATACCCTATTTTTTCTAGTTTTTCACTCTTTATAATCCTTAGCGTTTTAACCTCT
TTTATCTATTTCAAACTCCAAAACGCCCTTTTTAAGCCCAAAAATATTCATCAAACCACCAAACCCCTTAAAACTTTCAT
TTTATTTGCGCTTTTTTCCCTCACACAAATGTTTTACATTAACGCGCAATTGAGCTTTGTTGGTGCGTCTTTAGATCTCA
TCATAGAGCCAGCCAAAGATCCTTTTTTAATGAAAATCACCCCCGGTGCGTTTCGCAACCTTTATCTTTTAACACGCAAT
TACAGACAAAGCCATAACCTTAAATTCAGCGATTTTGCTAAAGAAACGCCTTTAGAAGTGGCGAAAAATTATTTCCATCT
TAAAGAAAACCCTTCAAACAACCTCTATGAGTTGCTAACTCAGACAAGCCATAACAATTCCAATCAAACCATTCAACATG
TTTTTTATATCGTTTCAGAGTCTCTGAGTTCATGGCATTTTGATAAAAAATTTGATTCCATAGGGCTAACGAGCGCTTTA
CAAGACTTGGTTAAAAAAGAACATGCTCACATGCTTTCTGCTTTTATTGAAGGCGCCCCACGGACCGTTAAGAGCCTGGA
TGTCCAAATCACAGGCTTACCCTATATCAATGATAATAACTTAGTCAATTCAGGAGTGATTCTCCCTAGCTTTCCTATGG
CGATTGGCAATATCACAAAAACTCTAGGTTATAAAAACAACTTTTATTATGGAGGCAGTGGGATTTGGAACAAACTAACG
AGTTTCACCAAAAAACAAGGTTTTCACGCCCTCTATTTCAATAACCATCTCTTAGAATTTGCCAAAAACAAGCCCTACCC
TAAACCCATAGAGAGCAACTGGGGAGTGCATGATAATATTTTATTTGACTATATTTTAGAAAACACCAACCCCCATGAAA
AAACTTTCAGCATGGTCATGACTTTAAGCAACCACGCGATCAAAAACGTGAATCTCAAAGCCTTTGGCGTGCCTTTAGAA
AAAATCCAAAAATTTGTGGAAAAAACCCCCAAATCAGAAAATCTACCGGACGCTAATTCTTTAGGGCATATTTACTGGTA
TGACAAAGTGGTGGTTGATTTCATCAAAAAAGCCAGCCAAAAATTCCCTAACTCGCTTTTTATCATCACAGGGGATCACT
TTGACAGGAGCTATGAATACGCTAAAAACGATTTGTATATCATTAAATCCGTGCCGCTTATTTTGTTCGCCCCTACTTTA
AAGCCTGAAACAATCAGTCAAGTCGGATCGCATTTAGACATCGCCCCTACGATTGTTGAATTAGTCGCTCCTGAAGGTTT
TCAATTTGTGAGTTTCGGGAAGCCTTTATTTTCTAACAACACAACAAACCCTCCAAGCCACCCCAATTACGTGCTAGGTT
ATGAAGCGATCGCTACCAAAGATTATTTTTATAACCCAAGTTTAGGGTTAAGATATTTGAACAAAAATTACAAAGAGCAA
AAGAATAAACAAAACGACAAAATAGAAGCTTCTAAATTTTACCAGCAATTAGAATCCTTAAAAGCCCTTAGTTATTACTT
GCTCTATCATGGAGCTAATCTTAAAGATTGA

Upstream 100 bases:

>100_bases
CTAATTTTCAAATCTTGGATTCTTTATTGGATTTCCCCTTGCTTCTTTTTGTCTTTTTTAAGACTTTATCTCTTGTTAAA
AAAAGGTTGTATTAACGCTT

Downstream 100 bases:

>100_bases
CAAACTGGGTTTTTATTCCCTTAAACGCATGATTTTTGCTACAATAATAGGATTTTAATTATATAAAGGATAAATGGGCA
TGCCAAATAGGGGCGTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoglycerol Transferase; Alkaline Phosphatase; Phosphoglycerol Transferase And Related Proteins; Arylsulfatase; Alkaline Phosphatase Superfamily Protein

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGARYDNRVVSSLAILFILIGLL
GLLAPKHQTKMLNIMACFSIAIILFLNIANIVYYGIYGNVFDENLLEFLHEDTLTILKMSGEYPIFSSFSLFIILSVLTS
FIYFKLQNALFKPKNIHQTTKPLKTFILFALFSLTQMFYINAQLSFVGASLDLIIEPAKDPFLMKITPGAFRNLYLLTRN
YRQSHNLKFSDFAKETPLEVAKNYFHLKENPSNNLYELLTQTSHNNSNQTIQHVFYIVSESLSSWHFDKKFDSIGLTSAL
QDLVKKEHAHMLSAFIEGAPRTVKSLDVQITGLPYINDNNLVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLT
SFTKKQGFHALYFNNHLLEFAKNKPYPKPIESNWGVHDNILFDYILENTNPHEKTFSMVMTLSNHAIKNVNLKAFGVPLE
KIQKFVEKTPKSENLPDANSLGHIYWYDKVVVDFIKKASQKFPNSLFIITGDHFDRSYEYAKNDLYIIKSVPLILFAPTL
KPETISQVGSHLDIAPTIVELVAPEGFQFVSFGKPLFSNNTTNPPSHPNYVLGYEAIATKDYFYNPSLGLRYLNKNYKEQ
KNKQNDKIEASKFYQQLESLKALSYYLLYHGANLKD

Sequences:

>Translated_676_residues
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGARYDNRVVSSLAILFILIGLL
GLLAPKHQTKMLNIMACFSIAIILFLNIANIVYYGIYGNVFDENLLEFLHEDTLTILKMSGEYPIFSSFSLFIILSVLTS
FIYFKLQNALFKPKNIHQTTKPLKTFILFALFSLTQMFYINAQLSFVGASLDLIIEPAKDPFLMKITPGAFRNLYLLTRN
YRQSHNLKFSDFAKETPLEVAKNYFHLKENPSNNLYELLTQTSHNNSNQTIQHVFYIVSESLSSWHFDKKFDSIGLTSAL
QDLVKKEHAHMLSAFIEGAPRTVKSLDVQITGLPYINDNNLVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLT
SFTKKQGFHALYFNNHLLEFAKNKPYPKPIESNWGVHDNILFDYILENTNPHEKTFSMVMTLSNHAIKNVNLKAFGVPLE
KIQKFVEKTPKSENLPDANSLGHIYWYDKVVVDFIKKASQKFPNSLFIITGDHFDRSYEYAKNDLYIIKSVPLILFAPTL
KPETISQVGSHLDIAPTIVELVAPEGFQFVSFGKPLFSNNTTNPPSHPNYVLGYEAIATKDYFYNPSLGLRYLNKNYKEQ
KNKQNDKIEASKFYQQLESLKALSYYLLYHGANLKD
>Mature_676_residues
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGARYDNRVVSSLAILFILIGLL
GLLAPKHQTKMLNIMACFSIAIILFLNIANIVYYGIYGNVFDENLLEFLHEDTLTILKMSGEYPIFSSFSLFIILSVLTS
FIYFKLQNALFKPKNIHQTTKPLKTFILFALFSLTQMFYINAQLSFVGASLDLIIEPAKDPFLMKITPGAFRNLYLLTRN
YRQSHNLKFSDFAKETPLEVAKNYFHLKENPSNNLYELLTQTSHNNSNQTIQHVFYIVSESLSSWHFDKKFDSIGLTSAL
QDLVKKEHAHMLSAFIEGAPRTVKSLDVQITGLPYINDNNLVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLT
SFTKKQGFHALYFNNHLLEFAKNKPYPKPIESNWGVHDNILFDYILENTNPHEKTFSMVMTLSNHAIKNVNLKAFGVPLE
KIQKFVEKTPKSENLPDANSLGHIYWYDKVVVDFIKKASQKFPNSLFIITGDHFDRSYEYAKNDLYIIKSVPLILFAPTL
KPETISQVGSHLDIAPTIVELVAPEGFQFVSFGKPLFSNNTTNPPSHPNYVLGYEAIATKDYFYNPSLGLRYLNKNYKEQ
KNKQNDKIEASKFYQQLESLKALSYYLLYHGANLKD

Specific function: Unknown

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77507; Mature: 77507

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHCCC
RYDNRVVSSLAILFILIGLLGLLAPKHQTKMLNIMACFSIAIILFLNIANIVYYGIYGNV
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
FDENLLEFLHEDTLTILKMSGEYPIFSSFSLFIILSVLTSFIYFKLQNALFKPKNIHQTT
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KPLKTFILFALFSLTQMFYINAQLSFVGASLDLIIEPAKDPFLMKITPGAFRNLYLLTRN
HHHHHHHHHHHHHHHHHHHEEEEHEEECCCEEEEEECCCCCEEEEECCCHHHHEEEEECC
YRQSHNLKFSDFAKETPLEVAKNYFHLKENPSNNLYELLTQTSHNNSNQTIQHVFYIVSE
HHHHCCCCHHHHHHCCCHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
SLSSWHFDKKFDSIGLTSALQDLVKKEHAHMLSAFIEGAPRTVKSLDVQITGLPYINDNN
HHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCEECCCC
LVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTSFTKKQGFHALYFNNHLLEF
CCCCCEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCEEEEECHHHHHH
AKNKPYPKPIESNWGVHDNILFDYILENTNPHEKTFSMVMTLSNHAIKNVNLKAFGVPLE
HCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHH
KIQKFVEKTPKSENLPDANSLGHIYWYDKVVVDFIKKASQKFPNSLFIITGDHFDRSYEY
HHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH
AKNDLYIIKSVPLILFAPTLKPETISQVGSHLDIAPTIVELVAPEGFQFVSFGKPLFSNN
CCCCEEEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEHCCCCCHHCCC
TTNPPSHPNYVLGYEAIATKDYFYNPSLGLRYLNKNYKEQKNKQNDKIEASKFYQQLESL
CCCCCCCCCEEEEHHHHCCCCCEECCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHH
KALSYYLLYHGANLKD
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSLSHALFSLFLKGFYFTFFMSLLFVFNRIGFILYTGYYKHALKNPIFDEIIKTLFNGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCHHHHHHHHHHCCC
RYDNRVVSSLAILFILIGLLGLLAPKHQTKMLNIMACFSIAIILFLNIANIVYYGIYGNV
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH
FDENLLEFLHEDTLTILKMSGEYPIFSSFSLFIILSVLTSFIYFKLQNALFKPKNIHQTT
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KPLKTFILFALFSLTQMFYINAQLSFVGASLDLIIEPAKDPFLMKITPGAFRNLYLLTRN
HHHHHHHHHHHHHHHHHHHEEEEHEEECCCEEEEEECCCCCEEEEECCCHHHHEEEEECC
YRQSHNLKFSDFAKETPLEVAKNYFHLKENPSNNLYELLTQTSHNNSNQTIQHVFYIVSE
HHHHCCCCHHHHHHCCCHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
SLSSWHFDKKFDSIGLTSALQDLVKKEHAHMLSAFIEGAPRTVKSLDVQITGLPYINDNN
HHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCEECCCC
LVNSGVILPSFPMAIGNITKTLGYKNNFYYGGSGIWNKLTSFTKKQGFHALYFNNHLLEF
CCCCCEECCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCEEEEECHHHHHH
AKNKPYPKPIESNWGVHDNILFDYILENTNPHEKTFSMVMTLSNHAIKNVNLKAFGVPLE
HCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHH
KIQKFVEKTPKSENLPDANSLGHIYWYDKVVVDFIKKASQKFPNSLFIITGDHFDRSYEY
HHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH
AKNDLYIIKSVPLILFAPTLKPETISQVGSHLDIAPTIVELVAPEGFQFVSFGKPLFSNN
CCCCEEEEECCCEEEEECCCCHHHHHHHCCCCCHHHHHHHHHCCCCCEEHCCCCCHHCCC
TTNPPSHPNYVLGYEAIATKDYFYNPSLGLRYLNKNYKEQKNKQNDKIEASKFYQQLESL
CCCCCCCCCEEEEHHHHCCCCCEECCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHH
KALSYYLLYHGANLKD
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA