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The map label for this gene is 108562932

Identifier: 108562932

GI number: 108562932

Start: 530565

End: 531215

Strand: Direct

Name: 108562932

Synonym: HPAG1_0507

Alternate gene names: NA

Gene position: 530565-531215 (Clockwise)

Preceding gene: 108562923

Following gene: 108562933

Centisome position: 33.24

GC content: 34.56

Gene sequence:

>651_bases
ATGAGCGATACAACAGAGCGTCATGGATCCAATCCGCTAAACGCCCCACCACCTAGCAACTCACAGAGCAATGATCTTTT
AAATTTGCTAGACTCGTTATATCCCAAAGGGAGTTTAGGGGAGCAAAGATTTCACGAAGCTTTAAAGAATCAAGAAGAGT
TGAAAAATATCCTGATAGAAATAGAAAAGCTACCGCAAGAAAAAAGGTATGAACTTCTGATGCAGATAGGACAAGCCAAA
CAGAGAATAATGGAAGCATACGCTCATTCATTCTTGGGATATATAGGGGGACTAGAGCATCTGTTAGGATTATGTATGGG
TGGGATATTTGTTTTGTTTGCAATCTATTTTGTATTTTTAAGAACTAGCAAAAATGTGGATTTGGTGGAAAGTCTAAAAA
CAAAACTAAAACTTCAGTATTTTTACTATGCCTTTGGTGTAGGTGCGGTTTTGTTTTTTGGATTAGAAACAATTAGATCT
ATTTATGAACTATATATATTAGGAATTGGTAGCACTAACGACAAGGTGCTCTTTGTTTTGAAAAACATTTGCTTCATAGG
TATGGGCTATTTGATTTATAAAGTTGTTAAGGTTATTGGTATAAAAAATTTTATCAATGGTCTTTTCACTTCAAAGAAAC
AAGAGCAATAA

Upstream 100 bases:

>100_bases
TTAAAAGCACCTAATTCAAAGAGATAAGACAATCACAACTCAGAGAGAGAATGGTATAATAACAAAACAATTTCTCAATT
TAATTCTTGAAAGGAGTTTC

Downstream 100 bases:

>100_bases
GGAGAAACAATAATGAAAATGAGAGCAAGTGTTTTAACTGGTGCGACAATTCTATGCTTAATTTTAAGCGCATGCAGTAA
TTATGCGAAAAAAGTGGTGA

Product: cag pathogenicity island protein U

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSDTTERHGSNPLNAPPPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAK
QRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNVDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRS
IYELYILGIGSTNDKVLFVLKNICFIGMGYLIYKVVKVIGIKNFINGLFTSKKQEQ

Sequences:

>Translated_216_residues
MSDTTERHGSNPLNAPPPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAK
QRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNVDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRS
IYELYILGIGSTNDKVLFVLKNICFIGMGYLIYKVVKVIGIKNFINGLFTSKKQEQ
>Mature_215_residues
SDTTERHGSNPLNAPPPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIEIEKLPQEKRYELLMQIGQAKQ
RIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFLRTSKNVDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRSI
YELYILGIGSTNDKVLFVLKNICFIGMGYLIYKVVKVIGIKNFINGLFTSKKQEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24550; Mature: 24419

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTTERHGSNPLNAPPPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHH
IEKLPQEKRYELLMQIGQAKQRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTSKNVDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRSIYELYILGIGSTNDKVLFVL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KNICFIGMGYLIYKVVKVIGIKNFINGLFTSKKQEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDTTERHGSNPLNAPPPSNSQSNDLLNLLDSLYPKGSLGEQRFHEALKNQEELKNILIE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHH
IEKLPQEKRYELLMQIGQAKQRIMEAYAHSFLGYIGGLEHLLGLCMGGIFVLFAIYFVFL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTSKNVDLVESLKTKLKLQYFYYAFGVGAVLFFGLETIRSIYELYILGIGSTNDKVLFVL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
KNICFIGMGYLIYKVVKVIGIKNFINGLFTSKKQEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA