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The map label for this gene is cagT [H]

Identifier: 108562933

GI number: 108562933

Start: 531228

End: 532070

Strand: Direct

Name: cagT [H]

Synonym: HPAG1_0508

Alternate gene names: 108562933

Gene position: 531228-532070 (Clockwise)

Preceding gene: 108562932

Following gene: 108562937

Centisome position: 33.28

GC content: 36.77

Gene sequence:

>843_bases
ATGAAAATGAGAGCAAGTGTTTTAACTGGTGCGACAATTCTATGCTTAATTTTAAGCGCATGCAGTAATTATGCGAAAAA
AGTGGTGAAACAAAAGAACCATGTTTATACGCCTGTGTATAATGAACTGATAGAGAAGTATAGTGAGATACCCTTAAATG
ACAAGCTCAAAGACACACCATTCATGGTGCAAGTGAAGTTGCCAAATTACAAGGACTATTTGTTGGATAATAAACAAGTT
GTACTAACTTTCAAACTTGTTCATCATTCTAAAAAGATTACGCTCATAGGCGATGCCAATAAGATACTTCAATACAAGAA
TTACTTCCAAGCTAACGGGGCAAGATCCGACATTGATTTTTACTTGCAGCCTACTTTGAATCAAAAGGGTGTGGTGATGA
TAGCGAGTAACTACAATGATAATCCCAACAGCAAAGAAAAACCACAGACCTTTGATGTGTTGCAAGGAAGTCAGCCAATG
CTAGGAGCTAACACAAAAAACTTGCATGGCTATGATGTGAGTGGAGCAAACAACAAGCAAGTGATCAATGAAGTGGCAAG
AGAAAAAGCTCAGCTAGAAAAAATCAATCAGTATTACAAAACTCTCTTACAAGACAAGGAACAAGAATATACCACTAGGA
AAAATAACCAACGAGAAATTTTAGAAACATTGAGTAATCGTGCAGGTTATCAAATGAGGCAGAATGTGATTAGTTCTGAG
ATTTTTAAGAATGGCAACTTGAACATGCAAGCCAAAGAAGAAGAAGTTAGGGAGAAGCTACAAGAAGAAAGAGAGAATGA
ATACTTGCGCAATCAAATCAGAAGTTTGCTCAGTGGTAAGTGA

Upstream 100 bases:

>100_bases
GGGCTATTTGATTTATAAAGTTGTTAAGGTTATTGGTATAAAAAATTTTATCAATGGTCTTTTCACTTCAAAGAAACAAG
AGCAATAAGGAGAAACAATA

Downstream 100 bases:

>100_bases
TTGGAAGAAAGGGAGAGTGGATTTTTCTAAGAGTAGAGAGCAACGCCAATGGGCGTTAGCTTTACTTGATAGGTAAGGCG
ATCAAATAGGTAATCTTTTT

Product: cag pathogenicity island protein T

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKMRASVLTGATILCLILSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNSKEKPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK

Sequences:

>Translated_280_residues
MKMRASVLTGATILCLILSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNSKEKPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK
>Mature_280_residues
MKMRASVLTGATILCLILSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTPFMVQVKLPNYKDYLLDNKQV
VLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDFYLQPTLNQKGVVMIASNYNDNPNSKEKPQTFDVLQGSQPM
LGANTKNLHGYDVSGANNKQVINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
IFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32380; Mature: 32380

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRASVLTGATILCLILSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
FMVQVKLPNYKDYLLDNKQVVLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDF
EEEEEECCCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEE
YLQPTLNQKGVVMIASNYNDNPNSKEKPQTFDVLQGSQPMLGANTKNLHGYDVSGANNKQ
EEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCHH
VINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
IFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK
HHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMRASVLTGATILCLILSACSNYAKKVVKQKNHVYTPVYNELIEKYSEIPLNDKLKDTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
FMVQVKLPNYKDYLLDNKQVVLTFKLVHHSKKITLIGDANKILQYKNYFQANGARSDIDF
EEEEEECCCCHHHHCCCCEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCEE
YLQPTLNQKGVVMIASNYNDNPNSKEKPQTFDVLQGSQPMLGANTKNLHGYDVSGANNKQ
EEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEECCCCCCHH
VINEVAREKAQLEKINQYYKTLLQDKEQEYTTRKNNQREILETLSNRAGYQMRQNVISSE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
IFKNGNLNMQAKEEEVREKLQEERENEYLRNQIRSLLSGK
HHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]