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The map label for this gene is 108562865

Identifier: 108562865

GI number: 108562865

Start: 452561

End: 453292

Strand: Reverse

Name: 108562865

Synonym: HPAG1_0440

Alternate gene names: NA

Gene position: 453292-452561 (Counterclockwise)

Preceding gene: 108562866

Following gene: 108562864

Centisome position: 28.4

GC content: 38.52

Gene sequence:

>732_bases
ATGCCATACAATGAAACCACAAGGGTTCAAATCCCTGCCTTAATGCATTTAGCCAAGTTGGGCTATAACTTTATTTCTCA
AAAAGATAAGCCTAACCTAGACACCGCCACCAATATTTTAATAGATAGTTTCACTCAAGCGTTTGAGCGGTTAAACCCCA
ATAAAAACGCAAAAGATGTTCTTGCTGAAATGAAAAAACGCTTGAATTACGATGATTTAGGCAAAAGCTTTTATGAATAC
TTGCTCAAAAGCGAAAATCAAATCATAGACTTTGATAACCCTAACAGCAATCTTTATGAAATGATGACCGAATTACCCTA
CAAATCCTTTAGGCCTGACATCACCCTTTTTATCAATGGCTTGCCTTTGGTGAATATAGAAGTTAAACAGCCTTTCGCCG
GACAAGGCATTAAAGAAGAAAAAGATCGCCATATCAAACGCTATGAAAACCCTGAAAACAAAGTTTTTTATAACCTTGCG
CAAATCTGGCTTTTTAGCGATAACTTACCCTATGATGAAAACAACCCCGATCAAGGCGCGTTTTATAGCGCTTCTTATTC
GCCTATTTTCCAACGCTTTGTTGAAGCTGATAGGCTAGATATTACCCCCCCCCCCCCCGAAAATGATCAAAACCATCAAA
ACCATCGATCGCTTGAAGAAATTCAAAAAAGCGTCTTAAACGAATTCAATCTCAAAGACACCCCCACAAACGCCCTTTTA
ACTTCGTTTTGA

Upstream 100 bases:

>100_bases
AATTCCTTAAAGAAGCCTGTTTATTATTGCAAATGCAACTCAAACAACCATGATTTTTATTTTTACATTATAATAACAAC
CTTAAATCAAAGGGGTGTTT

Downstream 100 bases:

>100_bases
TCCCCAAAAAGGCTTTGCTTTATCCTAAAATACGGCATCAGTTTCTTAAAAGAAAGATCAGAGTTTAAAAAACACATTTG
GCGTTATGCGCAGATGTTTG

Product: type I restriction enzyme R protein

Products: NA

Alternate protein names: Type I Restriction R; Type I Restriction- System Restriction Protein; Type I Restriction; Type I Site-Specific Deoxyribonuclease; Type I Restriction R Protein N Terminal Domain Protein; Type I Restriction R Subunit

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MPYNETTRVQIPALMHLAKLGYNFISQKDKPNLDTATNILIDSFTQAFERLNPNKNAKDVLAEMKKRLNYDDLGKSFYEY
LLKSENQIIDFDNPNSNLYEMMTELPYKSFRPDITLFINGLPLVNIEVKQPFAGQGIKEEKDRHIKRYENPENKVFYNLA
QIWLFSDNLPYDENNPDQGAFYSASYSPIFQRFVEADRLDITPPPPENDQNHQNHRSLEEIQKSVLNEFNLKDTPTNALL
TSF

Sequences:

>Translated_243_residues
MPYNETTRVQIPALMHLAKLGYNFISQKDKPNLDTATNILIDSFTQAFERLNPNKNAKDVLAEMKKRLNYDDLGKSFYEY
LLKSENQIIDFDNPNSNLYEMMTELPYKSFRPDITLFINGLPLVNIEVKQPFAGQGIKEEKDRHIKRYENPENKVFYNLA
QIWLFSDNLPYDENNPDQGAFYSASYSPIFQRFVEADRLDITPPPPENDQNHQNHRSLEEIQKSVLNEFNLKDTPTNALL
TSF
>Mature_242_residues
PYNETTRVQIPALMHLAKLGYNFISQKDKPNLDTATNILIDSFTQAFERLNPNKNAKDVLAEMKKRLNYDDLGKSFYEYL
LKSENQIIDFDNPNSNLYEMMTELPYKSFRPDITLFINGLPLVNIEVKQPFAGQGIKEEKDRHIKRYENPENKVFYNLAQ
IWLFSDNLPYDENNPDQGAFYSASYSPIFQRFVEADRLDITPPPPENDQNHQNHRSLEEIQKSVLNEFNLKDTPTNALLT
SF

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28352; Mature: 28221

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYNETTRVQIPALMHLAKLGYNFISQKDKPNLDTATNILIDSFTQAFERLNPNKNAKDV
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LAEMKKRLNYDDLGKSFYEYLLKSENQIIDFDNPNSNLYEMMTELPYKSFRPDITLFING
HHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCHHHCCCCEEEEECC
LPLVNIEVKQPFAGQGIKEEKDRHIKRYENPENKVFYNLAQIWLFSDNLPYDENNPDQGA
CEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCC
FYSASYSPIFQRFVEADRLDITPPPPENDQNHQNHRSLEEIQKSVLNEFNLKDTPTNALL
EECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
TSF
CCC
>Mature Secondary Structure 
PYNETTRVQIPALMHLAKLGYNFISQKDKPNLDTATNILIDSFTQAFERLNPNKNAKDV
CCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
LAEMKKRLNYDDLGKSFYEYLLKSENQIIDFDNPNSNLYEMMTELPYKSFRPDITLFING
HHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCHHHCCCCEEEEECC
LPLVNIEVKQPFAGQGIKEEKDRHIKRYENPENKVFYNLAQIWLFSDNLPYDENNPDQGA
CEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCC
FYSASYSPIFQRFVEADRLDITPPPPENDQNHQNHRSLEEIQKSVLNEFNLKDTPTNALL
EECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
TSF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA