Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 108562785

GI number: 108562785

Start: 373179

End: 374021

Strand: Reverse

Name: ribF [H]

Synonym: HPAG1_0360

Alternate gene names: 108562785

Gene position: 374021-373179 (Counterclockwise)

Preceding gene: 108562786

Following gene: 108562784

Centisome position: 23.43

GC content: 37.6

Gene sequence:

>843_bases
ATGTTGAATTTTTTATCCATTTCAAGCGAGCCTAAAATTAAAAGCCTGGCTATCGGTAAATTTGACGGCTTGCATTTAGG
GCATCAAGCCCTTTTTAAAGAATTAAAAGATCCCAAAGCCCTTTTAATCATAGAAAAAAAACATTACACTAAAGGCTATT
TAACCCCCCTAAAATACCGCGCCAAACTCGTGGGCATGCCTTTATTTTTTGTGTATTTAGAAGAGATTTCGCACTTAAAC
GCTTCAGAATTTTTAGAGCTTTTAAAAAAGAAATTCCCCCATTTAGAACGCCTGGTGGTGGGCTATGATTTCAGGTTTGG
GCATGGAAGACAAAATGACGCTTTATTTTTAAAAGAGCGTTTTGAAAAAACCATTATTGTGCCTGAAGTGAAAATCCAAA
ATATTAGCGTGCATTCTAAGATGATCAAACTAGCCCTAAGTCATGGCGACTTATCTTTAGCTAACAAGCTCTTAGGCAGG
CCTTATGAAGTGTGCGGAAAAGTCATTAGCGATCAGGGCTTGGGGCATAAAGAATTAGCGCCCACTTTAAATATCAAAAC
TAAAGATTTTATCCTCCCTAGTTTTGGGGTGTATGCGAGTTTGGTGAAAGTAAAAGATCCAATTTATCAAAAAAGCGTGA
GTTTTATAGGCAATCGCTTAAGCACGGATCAACATTTCGCCATAGAATGCCATGTGCTTGATACCATCATAGAAAATCCG
CCCCAAGAAATCGCTTTGCGTTGGGTTCAAAAAATACGAGACAACATGCGTTTTTCTTCGTTAAAAGAGCTTAAAAATCA
GATCCAACAAGACATCTTAAGAGCCAAAGAGATTTTGAGATAA

Upstream 100 bases:

>100_bases
GCCATTTTGAACGCTTTAGAAAACTTTAAAAACCATTTAAAAACAAAGGATTTTCAAATCTTAGAGATCCAAGAAAGCTT
AGTGAAAGGGAAAAACGGGA

Downstream 100 bases:

>100_bases
TTTGTGTTAAAATGACTCTCAAAAACCTTAAAAACGGAAAAATTTGATGCGATTGAGTAACGCTGACTTAGAACGATTAA
AAAGCATGGCCAATGTGCTT

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLNFLSISSEPKIKSLAIGKFDGLHLGHQALFKELKDPKALLIIEKKHYTKGYLTPLKYRAKLVGMPLFFVYLEEISHLN
ASEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEKTIIVPEVKIQNISVHSKMIKLALSHGDLSLANKLLGR
PYEVCGKVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNRLSTDQHFAIECHVLDTIIENP
PQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR

Sequences:

>Translated_280_residues
MLNFLSISSEPKIKSLAIGKFDGLHLGHQALFKELKDPKALLIIEKKHYTKGYLTPLKYRAKLVGMPLFFVYLEEISHLN
ASEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEKTIIVPEVKIQNISVHSKMIKLALSHGDLSLANKLLGR
PYEVCGKVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNRLSTDQHFAIECHVLDTIIENP
PQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR
>Mature_280_residues
MLNFLSISSEPKIKSLAIGKFDGLHLGHQALFKELKDPKALLIIEKKHYTKGYLTPLKYRAKLVGMPLFFVYLEEISHLN
ASEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKERFEKTIIVPEVKIQNISVHSKMIKLALSHGDLSLANKLLGR
PYEVCGKVISDQGLGHKELAPTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNRLSTDQHFAIECHVLDTIIENP
PQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=286, Percent_Identity=31.1188811188811, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 32157; Mature: 32157

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNFLSISSEPKIKSLAIGKFDGLHLGHQALFKELKDPKALLIIEKKHYTKGYLTPLKYR
CCCEECCCCCCCCHHEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH
AKLVGMPLFFVYLEEISHLNASEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKER
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHEECEECCCCCCCCHHHHHHH
FEKTIIVPEVKIQNISVHSKMIKLALSHGDLSLANKLLGRPYEVCGKVISDQGLGHKELA
HCCEEECCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHCC
PTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNRLSTDQHFAIECHVLDTIIENP
CCCCCCCHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCC
PQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNFLSISSEPKIKSLAIGKFDGLHLGHQALFKELKDPKALLIIEKKHYTKGYLTPLKYR
CCCEECCCCCCCCHHEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH
AKLVGMPLFFVYLEEISHLNASEFLELLKKKFPHLERLVVGYDFRFGHGRQNDALFLKER
HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHEECEECCCCCCCCHHHHHHH
FEKTIIVPEVKIQNISVHSKMIKLALSHGDLSLANKLLGRPYEVCGKVISDQGLGHKELA
HCCEEECCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHCC
PTLNIKTKDFILPSFGVYASLVKVKDPIYQKSVSFIGNRLSTDQHFAIECHVLDTIIENP
CCCCCCCHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCC
PQEIALRWVQKIRDNMRFSSLKELKNQIQQDILRAKEILR
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]