| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is ftsK [H]
Identifier: 108562782
GI number: 108562782
Start: 366295
End: 368907
Strand: Reverse
Name: ftsK [H]
Synonym: HPAG1_0357
Alternate gene names: 108562782
Gene position: 368907-366295 (Counterclockwise)
Preceding gene: 108562783
Following gene: 108562781
Centisome position: 23.11
GC content: 40.68
Gene sequence:
>2613_bases TTGCTCTTTCAAAGACATGTGCAACCGATGAAATCTAAAAAACTTTATTTAGCTTTAATCATAGGGGTTTTATTAGCGTT TTTAACCCTATCTTCATGGCTAGGCAATAGCGGTTTAGTGGGGCGTTTTGGGGTGTGGTTTGCCGCAACCAATAAAAAAT ATTTTGGGTATCTTTCATTGATTAATTTACCCTATTTAGCGTGGGTTTTATTCCTTTTATACAAGACTAAAAACCCTTTT ACAGAAATCGTTTTAGAAAAAACTTTAGGGCATCTATTAGGCATTTTATCTTTGCTCTTTTTGCAATCTAGCCTGCTAGA TCAAGGGGAAATCGGCAACAGCGCGCGTTTGTTTTTACGCCCTTTTATAGGGGACTTTGGGCTTTATGCACTTATAATGC TTATGGTAGTTATTTCTTATTTGATTTTATTCAAACTGCCCCCTAAAAGCGTTTTTTACCCTTATATAAATAAGACACAA AACCTTTTAAAAGAGATTTATAAACAATGTTTGCAGGCTTTTAGCCCAAATTTTAGCCCAAAAAAAGAGGGTTTTGAAAA CACCCCATCAGATATCCAAAAAAAAGAAACCAAAAACGACAAAGAAAAAGAAAATCGCAAAGAAAACCTTATTGATGAAA ACCACAAAACCCCTAACGAAGAATCGTTTCTAGCGATCCCTACCCCCTATAACACGACTTTAAACGATTTAGAGCCGCAA GAAGGCTTAGTCCAAATTTCCTCCCACCCTCCTACCCATTACACCATTTACCCTAAAAAAAACCGATTTGATGATTTGAC TAACCCCACTAACCCCACTTTAAAAGAAACTAAACAAGAAACTAAAGAAAGAGAACCCACGCCTAAACAAGAAACTCTTA CGCCCGCCACGCCCAAACCTGCCACACTCAAACCTATCATATCAGCACCCATCATGCCCGCATCTGCGCCTATAATAGAA AATGACAACAAAACACAAAACCACAAAGCCCCAAACCCCCCAAAAAAAGAAGAAAGCCCACAAGAAAACGTGCAAGAAGA AATGATAGAAGAAACGATACAAGAAAATCTCAAAGAAGAAGAAAAAGAAATACAAAACGCTCCAAGCTTTAGCCCACTAA CCCCCACAAGCGCTAAAAAACCCGTTATGGTTAAAGAATTGAGCGAAAATAAAGAGATATTAGACGGATTGGATTATGGC GAAGTAGAAAAACCCAAAGATTATGAGCTTCCCACCACGCAATTATTGAATGCGGTTTGTTTGAAAGACACTTCTTTAGA CGAAAACGAGATTGACCAAAAAATCCAGGATCTATTGAGCAAGCTACGCACCTTTAAAATTGATGGCGATATTATCCGCA CTTATTCAGGCCCTATTGTAACCACTTTTGAATTCCGCCCAGCCCCTAATGTTAAGGTGAGCCGCATTTTAGGCTTGAGC GATGATTTAGCGATGACTTTATGCGCTGAATCCATTCGCATTCAAGCCCCTATCAGGGGTAAAGATGTCGTTGGCATTGA AATCCCTAACAGCCAAAGCCAGATCATTTATTTAAGAGAAATTTTAGAGAGCGAATTGTTTCAAAAATCCAGCTCGCCCT TAACTCTAGCTTTAGGCAAAGACATTGTGGGTAACCCTTTCATCACGGATTTAAAAAAGCTCCCTCACTTGCTTATCGCC GGCACGACAGGAAGCGGTAAGAGCGTGGGCGTGAATGCGATGATTTTATCCTTACTTTATAAAAACCCTCCCGATCAACT CAAATTAGTGATGATCGATCCCAAAATGGTAGAATTTAGCATTTATGCGGATATCCCTCATTTACTCACGCCCATTATCA CCGACCCTAAAAAAGCTATTGGGGCTTTGCAAAGCGTGGCTAAAGAAATGGAACGCCGATATTCTTTAATGAGCGAATAC AAGGTTAAAACCATTGATTCTTACAATGAGCAAGCCCAAAGTAACGGCGTTGAAGCGTTCCCCTATTTGATTGTAGTGAT TGATGAATTAGCGGATTTAATGATGACAGGGGGCAAAGAAGCGGAGTTTCCTATCGCTAGAATCGCTCAAATGGGGCGAG CGAGCGGCTTACACCTCATTGTAGCGACCCAACGCCCAAGCGTGGATGTCGTAACCGGCTTGATTAAAACCAACTTGCCT TCAAGGGTGAGTTTTAGGGTAGGCACTAAGATTGATTCTAAAGTGATTTTAGACACCGATGGGGCGCAAAGCTTGTTAGG AAGGGGCGATATGCTCTTTACCCCCCCGGGAGCGAACGGGTTAGTGCGCTTGCATGCCCCCTTTGCCACTGAAGATGAAA TCAAAAAAATCGTGGATTTTATTAAAGCCCAAAAAGAAGTGGAATACGATAAAGATTTCTTGCTAGAAGAATCGCGCATG CCTTTAGACACCCCTAACTATCAAGGCGATGACATTCTAGAAAGGGCTAAAGCGGTGATTTTAGAAAAAAAGATCACTTC TACGAGTTTTTTACAACGCCAATTAAAAATCGGCTACAACCAAGCCGCCACCATTACGGACGAATTAGAAGCTCAAGGCT TTTTATCCCCAAGAAACGCCAAAGGCAACAGAGAGATTTTGCAAAACTTTTAG
Upstream 100 bases:
>100_bases CTTTGCAGGCTAAAATGGATCATTTGGAATTTTCTCTTATCCCCAAGCTCAAGCAAGAAATTGATTTTGAAAAAACTTTA GAGGCTAAAGATTGTGAATA
Downstream 100 bases:
>100_bases GTTTTTTTTCATTGGATATTGGCAATAGAAACATTATTTTTAATTTTTAAAATTCATTTTCTTTAAAAAACTTTTCTCAA TGATACAAACGACACCAACC
Product: cell division protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 870; Mature: 870
Protein sequence:
>870_residues MLFQRHVQPMKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAATNKKYFGYLSLINLPYLAWVLFLLYKTKNPF TEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSARLFLRPFIGDFGLYALIMLMVVISYLILFKLPPKSVFYPYINKTQ NLLKEIYKQCLQAFSPNFSPKKEGFENTPSDIQKKETKNDKEKENRKENLIDENHKTPNEESFLAIPTPYNTTLNDLEPQ EGLVQISSHPPTHYTIYPKKNRFDDLTNPTNPTLKETKQETKEREPTPKQETLTPATPKPATLKPIISAPIMPASAPIIE NDNKTQNHKAPNPPKKEESPQENVQEEMIEETIQENLKEEEKEIQNAPSFSPLTPTSAKKPVMVKELSENKEILDGLDYG EVEKPKDYELPTTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNVKVSRILGLS DDLAMTLCAESIRIQAPIRGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGKDIVGNPFITDLKKLPHLLIA GTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEY KVKTIDSYNEQAQSNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLP SRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGANGLVRLHAPFATEDEIKKIVDFIKAQKEVEYDKDFLLEESRM PLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF
Sequences:
>Translated_870_residues MLFQRHVQPMKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAATNKKYFGYLSLINLPYLAWVLFLLYKTKNPF TEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSARLFLRPFIGDFGLYALIMLMVVISYLILFKLPPKSVFYPYINKTQ NLLKEIYKQCLQAFSPNFSPKKEGFENTPSDIQKKETKNDKEKENRKENLIDENHKTPNEESFLAIPTPYNTTLNDLEPQ EGLVQISSHPPTHYTIYPKKNRFDDLTNPTNPTLKETKQETKEREPTPKQETLTPATPKPATLKPIISAPIMPASAPIIE NDNKTQNHKAPNPPKKEESPQENVQEEMIEETIQENLKEEEKEIQNAPSFSPLTPTSAKKPVMVKELSENKEILDGLDYG EVEKPKDYELPTTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNVKVSRILGLS DDLAMTLCAESIRIQAPIRGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGKDIVGNPFITDLKKLPHLLIA GTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEY KVKTIDSYNEQAQSNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLP SRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGANGLVRLHAPFATEDEIKKIVDFIKAQKEVEYDKDFLLEESRM PLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF >Mature_870_residues MLFQRHVQPMKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAATNKKYFGYLSLINLPYLAWVLFLLYKTKNPF TEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSARLFLRPFIGDFGLYALIMLMVVISYLILFKLPPKSVFYPYINKTQ NLLKEIYKQCLQAFSPNFSPKKEGFENTPSDIQKKETKNDKEKENRKENLIDENHKTPNEESFLAIPTPYNTTLNDLEPQ EGLVQISSHPPTHYTIYPKKNRFDDLTNPTNPTLKETKQETKEREPTPKQETLTPATPKPATLKPIISAPIMPASAPIIE NDNKTQNHKAPNPPKKEESPQENVQEEMIEETIQENLKEEEKEIQNAPSFSPLTPTSAKKPVMVKELSENKEILDGLDYG EVEKPKDYELPTTQLLNAVCLKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNVKVSRILGLS DDLAMTLCAESIRIQAPIRGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGKDIVGNPFITDLKKLPHLLIA GTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFSIYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEY KVKTIDSYNEQAQSNGVEAFPYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLP SRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGANGLVRLHAPFATEDEIKKIVDFIKAQKEVEYDKDFLLEESRM PLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYNQAATITDELEAQGFLSPRNAKGNREILQNF
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Cytoplasmic side. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=485, Percent_Identity=44.9484536082474, Blast_Score=420, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 97637; Mature: 97637
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQRHVQPMKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAATNKKYFGYLSL CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHH INLPYLAWVLFLLYKTKNPFTEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSARLFLR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH PFIGDFGLYALIMLMVVISYLILFKLPPKSVFYPYINKTQNLLKEIYKQCLQAFSPNFSP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC KKEGFENTPSDIQKKETKNDKEKENRKENLIDENHKTPNEESFLAIPTPYNTTLNDLEPQ CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC EGLVQISSHPPTHYTIYPKKNRFDDLTNPTNPTLKETKQETKEREPTPKQETLTPATPKP CCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC ATLKPIISAPIMPASAPIIENDNKTQNHKAPNPPKKEESPQENVQEEMIEETIQENLKEE CCCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EKEIQNAPSFSPLTPTSAKKPVMVKELSENKEILDGLDYGEVEKPKDYELPTTQLLNAVC HHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH LKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNVKVSRILGLS HCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEECCCCCCCCHHHEECCC DDLAMTLCAESIRIQAPIRGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGK CHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC DIVGNPFITDLKKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFS CCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEE IYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEYKVKTIDSYNEQAQSNGVEAF EECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH PYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCC SRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGANGLVRLHAPFATEDEIKKIVDF CCEEEEECCCCCCEEEEECCCHHHHHCCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHH IKAQKEVEYDKDFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYN HHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QAATITDELEAQGFLSPRNAKGNREILQNF CCCCCHHHHHHCCCCCCCCCCCCHHHHHCC >Mature Secondary Structure MLFQRHVQPMKSKKLYLALIIGVLLAFLTLSSWLGNSGLVGRFGVWFAATNKKYFGYLSL CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEEECCCCHHHHHHH INLPYLAWVLFLLYKTKNPFTEIVLEKTLGHLLGILSLLFLQSSLLDQGEIGNSARLFLR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH PFIGDFGLYALIMLMVVISYLILFKLPPKSVFYPYINKTQNLLKEIYKQCLQAFSPNFSP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC KKEGFENTPSDIQKKETKNDKEKENRKENLIDENHKTPNEESFLAIPTPYNTTLNDLEPQ CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCC EGLVQISSHPPTHYTIYPKKNRFDDLTNPTNPTLKETKQETKEREPTPKQETLTPATPKP CCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC ATLKPIISAPIMPASAPIIENDNKTQNHKAPNPPKKEESPQENVQEEMIEETIQENLKEE CCCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH EKEIQNAPSFSPLTPTSAKKPVMVKELSENKEILDGLDYGEVEKPKDYELPTTQLLNAVC HHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH LKDTSLDENEIDQKIQDLLSKLRTFKIDGDIIRTYSGPIVTTFEFRPAPNVKVSRILGLS HCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCEEEEEECCCCCCCCHHHEECCC DDLAMTLCAESIRIQAPIRGKDVVGIEIPNSQSQIIYLREILESELFQKSSSPLTLALGK CHHHHHHHHHHHEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECC DIVGNPFITDLKKLPHLLIAGTTGSGKSVGVNAMILSLLYKNPPDQLKLVMIDPKMVEFS CCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCEEEEE IYADIPHLLTPIITDPKKAIGALQSVAKEMERRYSLMSEYKVKTIDSYNEQAQSNGVEAF EECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH PYLIVVIDELADLMMTGGKEAEFPIARIAQMGRASGLHLIVATQRPSVDVVTGLIKTNLP HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCC SRVSFRVGTKIDSKVILDTDGAQSLLGRGDMLFTPPGANGLVRLHAPFATEDEIKKIVDF CCEEEEECCCCCCEEEEECCCHHHHHCCCCEEECCCCCCCEEEEECCCCCHHHHHHHHHH IKAQKEVEYDKDFLLEESRMPLDTPNYQGDDILERAKAVILEKKITSTSFLQRQLKIGYN HHHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QAATITDELEAQGFLSPRNAKGNREILQNF CCCCCHHHHHHCCCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]