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The map label for this gene is 108562783

Identifier: 108562783

GI number: 108562783

Start: 368877

End: 371210

Strand: Reverse

Name: 108562783

Synonym: HPAG1_0358

Alternate gene names: NA

Gene position: 371210-368877 (Counterclockwise)

Preceding gene: 108562784

Following gene: 108562782

Centisome position: 23.25

GC content: 35.39

Gene sequence:

>2334_bases
ATGAACTTAGAAAAACTTTTTTCACAAAAAAACCCCCTGTTTGTTTTTAGCTCCACCAGGCGTTTAAAACATTTCTATTT
AGAGCAAGGCGAAGGGTTTTTGCCTAGCGCAATGAGCATGGGGAATTTTTTTGAACAGGCTTTTTACATCCCTAATAAAA
AGAAAATCCCTAAAAACGTGCGGCTAATTTTAATGATAGACACCATTAAAGCCATCGCTAAAGAAAAAAAATCCATTCTT
GAAGGGCTTTTGCTTTTTGAAAACAGCTTTTTAGGGTATTTGGAAAGCACTTCTTTTTTGTTTGATTTGTTTGATGAGTT
AAGTTCTGCTTGTATCAAGCTCAATGAGCTTTCTTCTAAAGACATTTACTTGGATTATGAAAAGCATTTAGAAGTCTTAG
AAATGATTTATGATCGCTACATTAAAAAGCTAGAAGAATTAGGCTTTTATGACAAAATCATGCAAGAAAAGCCCGCCATT
TTAAAAGAATTTTTTGAGCATTTTTCCTCCATTGAATGGCATTTAGACGGCTTTATGAGCGTTTTTGAAAGGCAATGCCT
ACTAGAAGTGGCCGAGTTAGTGCCTATCACTTTACACCTATCTTGCGATAAATACAACCAAAAATTCTTGGAATTTCTTA
ATCTCAAATTAGAAACAGATTGCGATTATTCCATTGATTTTAAAACCCAAAAGATTCTCTCCCAGACACCCAAGCGCCAA
AAAACAGAGCCAAAGCTTTACGCCAACTCCAGTTATTTAAAACAAAGCACTTTAGTTTTACAAACCATAGAAGAATATTT
GCAAAAAGATAACGACCCTAATAAAATGGCGATCATCACGCCCAATGCGGATTTTTTGCCTTTTTTAAAACTTTTAGACA
AAAACAACAATTTGAATTTTGCGATGGGATTAGGGGCTAAAAACAGCCCTTATTATACAGAGCTTGTAAAAATCTTAGAA
GATTTACAAACAAGTGGTGATTTGAGCGCATCGCCTTTATTGGATTTGGAAAACCTCACGCTTGCGCTTTTAGAACAACA
AAGCTCTAAAGAAAAAGCGCCCTTAAAAGAAGCGCATTCTCAAATCATGCACCAGTATCATCTTTTAAAAGACACGCTTA
AAAACTACAGCCTTAAAGATTTATTGCATTTGTATTTGCAAGAATTTGAAGCCAATTTCCGCTTAGACGATTCTAGCGGA
GGCAAAATACGAGTCATGGACACTTTAGAGACAAGGGGCATGCAATTTGATAAAATCGTTATTGTAGATTTCAATGAAAC
TTGCGTGCCAAGCCTTAAAGATTGCGATTTGTTTTTGAACTCTGCTTTAAGGAAATCGCTCAACCTCCCCACTTTATTAG
ATAAGAAAAATTTGCAAAAACATTATTACTACCAGCTCTTTAAAAACTCTAAAGAAATAACACTTTCTTATATAGAGAGC
GAAACTTCAAAAGCCTCTAACATGCTTTTAGAATTAGATTTGCATATAGAGCCTATCAAAGACGCTTACACGTTTTTTGC
ACCAAGTCCTTTAAAAGACTACCAAGAAGAAGAAATCAAAGCCGCTATCCCTAAAGATTTTAGCTTTAGCGCTAGCTCAT
TGAACGCTTTTTTAACTTGCAAGTGCCGTTTTTATTACCACTACATGAAGCGATTCAAAGAAAGCCCTAAAGATGAAAGC
AATAGCGCTGTGGGCAGTTTGCTCCATGAACTTTTAAAAGAAGCTTATGAAAAAGATAAAAACCCCTATGCGTTAGAAGA
GAGGCTCATTTGGCTCTTAGAAACAAGAAAAAACATTACCCCTAAAGAGCGTTTAGACACTCTTATAACGCTCAAAAAAA
TCCAGGCTTTTTATCTTAAAGAAAAAGAACGCTTTAAGGCAAAAATCAAAATCCTTGATCTTGAAAAAAGCTTTGAAACG
ACCATTCAAGGCGTTGCGTTTAAAGGGCGCATAGACAGGATTGACAAAACGGCTGACAATGAGATTATTTTATTGGATTA
CAAATTCAAAAACGATTTGAAATTAGACAACATGAGCGAAAAACAACGAAAAAGCTTAAGCCCCATAGAAATCGCTCAAA
TCAGCACCGATTACCAAATGGCCATCTATGCGCATGCTCTTAAAAATTTAGGCTACAAAGGGTCTATAAAAGCCTTTTTT
TATGATTTAAGAAAGGGCGAATTACTAGAAGAAGACGAGCTTACTTTGCAGGCTAAAATGGATCATTTGGAATTTTCTCT
TATCCCCAAGCTCAAGCAAGAAATTGATTTTGAAAAAACTTTAGAGGCTAAAGATTGTGAATATTGCTCTTTCAAAGACA
TGTGCAACCGATGA

Upstream 100 bases:

>100_bases
TGGATTCTTTTGGGAGCTCAGCAAAGGGCGATAAACTCTTTGAAAAATTCGGCTTCAGCGTTGAAAACATCACCGCTCAA
GCTAAAAGATTACTCAACGC

Downstream 100 bases:

>100_bases
AATCTAAAAAACTTTATTTAGCTTTAATCATAGGGGTTTTATTAGCGTTTTTAACCCTATCTTCATGGCTAGGCAATAGC
GGTTTAGTGGGGCGTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 777; Mature: 777

Protein sequence:

>777_residues
MNLEKLFSQKNPLFVFSSTRRLKHFYLEQGEGFLPSAMSMGNFFEQAFYIPNKKKIPKNVRLILMIDTIKAIAKEKKSIL
EGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSKDIYLDYEKHLEVLEMIYDRYIKKLEELGFYDKIMQEKPAI
LKEFFEHFSSIEWHLDGFMSVFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
KTEPKLYANSSYLKQSTLVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDKNNNLNFAMGLGAKNSPYYTELVKILE
DLQTSGDLSASPLLDLENLTLALLEQQSSKEKAPLKEAHSQIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSG
GKIRVMDTLETRGMQFDKIVIVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEITLSYIES
ETSKASNMLLELDLHIEPIKDAYTFFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLTCKCRFYYHYMKRFKESPKDES
NSAVGSLLHELLKEAYEKDKNPYALEERLIWLLETRKNITPKERLDTLITLKKIQAFYLKEKERFKAKIKILDLEKSFET
TIQGVAFKGRIDRIDKTADNEIILLDYKFKNDLKLDNMSEKQRKSLSPIEIAQISTDYQMAIYAHALKNLGYKGSIKAFF
YDLRKGELLEEDELTLQAKMDHLEFSLIPKLKQEIDFEKTLEAKDCEYCSFKDMCNR

Sequences:

>Translated_777_residues
MNLEKLFSQKNPLFVFSSTRRLKHFYLEQGEGFLPSAMSMGNFFEQAFYIPNKKKIPKNVRLILMIDTIKAIAKEKKSIL
EGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSKDIYLDYEKHLEVLEMIYDRYIKKLEELGFYDKIMQEKPAI
LKEFFEHFSSIEWHLDGFMSVFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
KTEPKLYANSSYLKQSTLVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDKNNNLNFAMGLGAKNSPYYTELVKILE
DLQTSGDLSASPLLDLENLTLALLEQQSSKEKAPLKEAHSQIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSG
GKIRVMDTLETRGMQFDKIVIVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEITLSYIES
ETSKASNMLLELDLHIEPIKDAYTFFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLTCKCRFYYHYMKRFKESPKDES
NSAVGSLLHELLKEAYEKDKNPYALEERLIWLLETRKNITPKERLDTLITLKKIQAFYLKEKERFKAKIKILDLEKSFET
TIQGVAFKGRIDRIDKTADNEIILLDYKFKNDLKLDNMSEKQRKSLSPIEIAQISTDYQMAIYAHALKNLGYKGSIKAFF
YDLRKGELLEEDELTLQAKMDHLEFSLIPKLKQEIDFEKTLEAKDCEYCSFKDMCNR
>Mature_777_residues
MNLEKLFSQKNPLFVFSSTRRLKHFYLEQGEGFLPSAMSMGNFFEQAFYIPNKKKIPKNVRLILMIDTIKAIAKEKKSIL
EGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSKDIYLDYEKHLEVLEMIYDRYIKKLEELGFYDKIMQEKPAI
LKEFFEHFSSIEWHLDGFMSVFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
KTEPKLYANSSYLKQSTLVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDKNNNLNFAMGLGAKNSPYYTELVKILE
DLQTSGDLSASPLLDLENLTLALLEQQSSKEKAPLKEAHSQIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSG
GKIRVMDTLETRGMQFDKIVIVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEITLSYIES
ETSKASNMLLELDLHIEPIKDAYTFFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLTCKCRFYYHYMKRFKESPKDES
NSAVGSLLHELLKEAYEKDKNPYALEERLIWLLETRKNITPKERLDTLITLKKIQAFYLKEKERFKAKIKILDLEKSFET
TIQGVAFKGRIDRIDKTADNEIILLDYKFKNDLKLDNMSEKQRKSLSPIEIAQISTDYQMAIYAHALKNLGYKGSIKAFF
YDLRKGELLEEDELTLQAKMDHLEFSLIPKLKQEIDFEKTLEAKDCEYCSFKDMCNR

Specific function: Unknown

COG id: COG3893

COG function: function code L; Inactivated superfamily I helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90815; Mature: 90815

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLEKLFSQKNPLFVFSSTRRLKHFYLEQGEGFLPSAMSMGNFFEQAFYIPNKKKIPKNV
CCHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
RLILMIDTIKAIAKEKKSILEGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSK
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCC
DIYLDYEKHLEVLEMIYDRYIKKLEELGFYDKIMQEKPAILKEFFEHFSSIEWHLDGFMS
CEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
VFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCEEECCCCCEECCHHHHHHHCCCCCC
KTEPKLYANSSYLKQSTLVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDKNNNLNF
CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEE
AMGLGAKNSPYYTELVKILEDLQTSGDLSASPLLDLENLTLALLEQQSSKEKAPLKEAHS
EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
QIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSGGKIRVMDTLETRGMQFDKIV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEECHHHCCCCCCEEE
IVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEITLSYIES
EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHCCCCCEEEEEHHH
ETSKASNMLLELDLHIEPIKDAYTFFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLTC
HHHHHHCEEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
KCRFYYHYMKRFKESPKDESNSAVGSLLHELLKEAYEKDKNPYALEERLIWLLETRKNIT
EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
PKERLDTLITLKKIQAFYLKEKERFKAKIKILDLEKSFETTIQGVAFKGRIDRIDKTADN
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHCEEECCCHHHHCCCCCC
EIILLDYKFKNDLKLDNMSEKQRKSLSPIEIAQISTDYQMAIYAHALKNLGYKGSIKAFF
CEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHH
YDLRKGELLEEDELTLQAKMDHLEFSLIPKLKQEIDFEKTLEAKDCEYCSFKDMCNR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MNLEKLFSQKNPLFVFSSTRRLKHFYLEQGEGFLPSAMSMGNFFEQAFYIPNKKKIPKNV
CCHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
RLILMIDTIKAIAKEKKSILEGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSK
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCC
DIYLDYEKHLEVLEMIYDRYIKKLEELGFYDKIMQEKPAILKEFFEHFSSIEWHLDGFMS
CEEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHH
VFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCEEECCCCCEECCHHHHHHHCCCCCC
KTEPKLYANSSYLKQSTLVLQTIEEYLQKDNDPNKMAIITPNADFLPFLKLLDKNNNLNF
CCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEE
AMGLGAKNSPYYTELVKILEDLQTSGDLSASPLLDLENLTLALLEQQSSKEKAPLKEAHS
EEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
QIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSGGKIRVMDTLETRGMQFDKIV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEEECHHHCCCCCCEEE
IVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEITLSYIES
EEECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHCCCCCEEEEEHHH
ETSKASNMLLELDLHIEPIKDAYTFFAPSPLKDYQEEEIKAAIPKDFSFSASSLNAFLTC
HHHHHHCEEEEEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
KCRFYYHYMKRFKESPKDESNSAVGSLLHELLKEAYEKDKNPYALEERLIWLLETRKNIT
EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
PKERLDTLITLKKIQAFYLKEKERFKAKIKILDLEKSFETTIQGVAFKGRIDRIDKTADN
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHCEEECCCHHHHCCCCCC
EIILLDYKFKNDLKLDNMSEKQRKSLSPIEIAQISTDYQMAIYAHALKNLGYKGSIKAFF
CEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHH
YDLRKGELLEEDELTLQAKMDHLEFSLIPKLKQEIDFEKTLEAKDCEYCSFKDMCNR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA