| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is cshA [H]
Identifier: 108562675
GI number: 108562675
Start: 253067
End: 254545
Strand: Direct
Name: cshA [H]
Synonym: HPAG1_0250
Alternate gene names: 108562675
Gene position: 253067-254545 (Clockwise)
Preceding gene: 108562662
Following gene: 108562676
Centisome position: 15.85
GC content: 43.41
Gene sequence:
>1479_bases ATGGAATTGAATCAACCACCACTCCCTACAGAAATTGATGATGACGCTTATCATAAGCCTAGTTTTAACGATTTGGGCTT AAAAGAATCGGTTTTAAAATCCGTTTATGAAGCCGGTTTCACTTCCCCAAGCCCCATTCAAGAAAAGGCCATTCCGGCTG TTTTGCAAGGCCGAGATGTCATCGCGCAAGCCCAAACAGGCACAGGAAAAACCGCCGCTTTCGCTCTGCCCATTATCAAC AACCTTAAAAACAACCACACCATAGAGGCCTTAGTGATCACGCCCACCAGAGAATTAGCCATGCAAATTAGCGATGAGAT TTTCAAATTGGGCAAACACACCAGGACTAAAACCGTGTGCGTGTATGGAGGCCAGAGCGTTAAAAAACAATGCGAATTCA TTAAGAAAAACCCCCAAGTGATGATCGCTACACCAGGAAGGCTGTTGGATCACTTAAAGAACGAACGCATCCATAAATTT GTGCCTAAAGTGGTCGTTTTAGATGAAAGCGATGAAATGCTGGATATGGGGTTTTTAGACGATATTGAAGAGATTTTTGA CTACCTCCCTAGCGAAGCGCAGATTTTGCTTTTTTCAGCCACGATGCCAGAGCCGATTAAAAGACTAGCGGATAAGATTT TAGAAAACCCTATTAAAATCCATATCGCCCCTTCTAATATCACTAACACCGACATCACCCAACGCTTTTATGTGATCAAT GAGCATGAGAGGGCTGAAGCTATCATGCGCCTTTTAGACACCCAAGCGCCCAAAAAGAGCATTGTTTTCACGCGCACCAA AAAAGAAGCTGATGAATTGCACCAATTCCTTGCTTCTAAAAATTACAAAAGCACCGCCTTGCATGGGGATATGGATCAAA GGGATCGGCGCGCTTCTATCATGGCGTTTAAAAAAAATGACGCTGATGTGTTGGTGGCTACAGATGTAGCGAGCCGTGGG CTAGACATTAGCGGTGTAAGCCATGTGTTCAATTACCACTTGCCCCTAAATACCGAGAGCTATATCCATCGCATCGGGAG AACCGGGCGAGCGGGCAAAAAAGGCATGGCGATCACTTTAGTAACCCCCTTAGAATACAAAGAGCTTTTACGCATGCAAA AAGAAATTGATTCAGAGATTGAACTTTTTGAAATCCCCACCATTAACGAAAATCAGATCATCAAAACCTTACATGACGCT AAAGTGTCTGAAGGGATCATCAGCCTTTATGAACAGCTTACTGAAATTTTTGAGCCGTCTCAATTGGTTTTAAAACTTTT GAGTTTGCAGTTTGAAACCAGCAAAATTGGCTTAAACCAGCAAGAAATTGATGCGATCCAAAACCCTAAAGAAAAAACGC CAAAACCCTCTCACAAAAAAACGCCCCAGCATGAGCGAGCGCGTTCTTTCAAAAAGGGCCAGCACAGAGACAGACACCCT AAAACAAACCACCATTCTAAAAAACCCAAACGCCGTTAA
Upstream 100 bases:
>100_bases TATGCTATACTCAAAAATCTTATAAACTTTAAATCAAAGATTTTAATTTTAGCCTTTTATCAGCTTAAAGTTTCAAATTA AATTGAGGTATGAATCTCCC
Downstream 100 bases:
>100_bases AATATTTAAAAAGGAAATTCATGCCCATTGATTTGAACGAACATTTAAAAAAGAAAAATTCTCAAAGAGAAACCCCCACG CCTAATACGCCTAATAATGG
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN NLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKF VPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRG LDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDA KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSHKKTPQHERARSFKKGQHRDRHP KTNHHSKKPKRR
Sequences:
>Translated_492_residues MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN NLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKF VPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRG LDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDA KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSHKKTPQHERARSFKKGQHRDRHP KTNHHSKKPKRR >Mature_492_residues MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN NLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKF VPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRG LDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDA KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSHKKTPQHERARSFKKGQHRDRHP KTNHHSKKPKRR
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=38.0813953488372, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=38.4196185286104, Blast_Score=258, Evalue=6e-69, Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=38.4196185286104, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=38.4196185286104, Blast_Score=258, Evalue=7e-69, Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=36.7724867724868, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI169881239, Length=367, Percent_Identity=37.6021798365123, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI13514809, Length=367, Percent_Identity=37.6021798365123, Blast_Score=253, Evalue=2e-67, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=37.0786516853933, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=39.6739130434783, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=38.6363636363636, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=38.0952380952381, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=38.1766381766382, Blast_Score=251, Evalue=9e-67, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=38.1766381766382, Blast_Score=251, Evalue=9e-67, Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=38.3783783783784, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=40.1069518716578, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=38.6486486486486, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=37.1830985915493, Blast_Score=245, Evalue=9e-65, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=37.1830985915493, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=37.1830985915493, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=37.1830985915493, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI148613856, Length=381, Percent_Identity=35.6955380577428, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI38201710, Length=381, Percent_Identity=35.6955380577428, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI31542656, Length=391, Percent_Identity=36.0613810741688, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=36.4902506963788, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=35.9550561797753, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=35.9550561797753, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=36, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=34.8571428571429, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=34.8571428571429, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=34.6883468834688, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI55749865, Length=378, Percent_Identity=34.6560846560847, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=36.3867684478371, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI41327776, Length=378, Percent_Identity=35.4497354497354, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=36.231884057971, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=34.1145833333333, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=35.0282485875706, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=34.1836734693878, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI8922886, Length=392, Percent_Identity=33.9285714285714, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=33.4254143646409, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=29.5, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI256223453, Length=380, Percent_Identity=31.5789473684211, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=374, Percent_Identity=32.3529411764706, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI38569503, Length=351, Percent_Identity=34.4729344729345, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI38569505, Length=351, Percent_Identity=34.4729344729345, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=33.7837837837838, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI17505907, Length=443, Percent_Identity=30.4740406320542, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=32.122905027933, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=32.9512893982808, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI256773275, Length=386, Percent_Identity=30.0518134715026, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI9966805, Length=338, Percent_Identity=30.1775147928994, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=27.6276276276276, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI20336298, Length=229, Percent_Identity=33.6244541484716, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=26.3285024154589, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI87082221, Length=373, Percent_Identity=41.8230563002681, Blast_Score=312, Evalue=4e-86, Organism=Escherichia coli, GI1787016, Length=383, Percent_Identity=41.77545691906, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI1787605, Length=338, Percent_Identity=39.3491124260355, Blast_Score=260, Evalue=1e-70, Organism=Escherichia coli, GI1790214, Length=352, Percent_Identity=39.2045454545455, Blast_Score=248, Evalue=7e-67, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=40, Blast_Score=244, Evalue=7e-66, Organism=Escherichia coli, GI48994977, Length=349, Percent_Identity=24.0687679083095, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=37.6693766937669, Blast_Score=280, Evalue=8e-76, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=37.3983739837398, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=37.2282608695652, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=39.4179894179894, Blast_Score=264, Evalue=7e-71, Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=37.9888268156425, Blast_Score=251, Evalue=8e-67, Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=38.5826771653543, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI86570094, Length=348, Percent_Identity=39.6551724137931, Blast_Score=244, Evalue=9e-65, Organism=Caenorhabditis elegans, GI17555296, Length=376, Percent_Identity=33.5106382978723, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17510307, Length=377, Percent_Identity=37.1352785145889, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17510309, Length=377, Percent_Identity=37.1352785145889, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71995514, Length=379, Percent_Identity=36.9393139841689, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=36.9393139841689, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=33.7988826815642, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17552642, Length=383, Percent_Identity=36.2924281984334, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=33.7988826815642, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=33.7142857142857, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=35.4838709677419, Blast_Score=231, Evalue=7e-61, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=32.9639889196676, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=36.3380281690141, Blast_Score=228, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=36.7567567567568, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=36.2162162162162, Blast_Score=218, Evalue=8e-57, Organism=Caenorhabditis elegans, GI115532548, Length=390, Percent_Identity=32.5641025641026, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI115532546, Length=386, Percent_Identity=32.9015544041451, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.4054054054054, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17509811, Length=352, Percent_Identity=33.8068181818182, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=35.0267379679144, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=35.0267379679144, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17505370, Length=430, Percent_Identity=30.4651162790698, Blast_Score=184, Evalue=9e-47, Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=35.0267379679144, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=29.3956043956044, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17508543, Length=367, Percent_Identity=31.0626702997275, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.6062176165803, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.6590257879656, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=31.6353887399464, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI193208216, Length=386, Percent_Identity=30.0518134715026, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI25148203, Length=429, Percent_Identity=26.8065268065268, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17556951, Length=379, Percent_Identity=27.9683377308707, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=29.6296296296296, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=31.7073170731707, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25148291, Length=363, Percent_Identity=27.2727272727273, Blast_Score=123, Evalue=3e-28, Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=25.068870523416, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=24.9249249249249, Blast_Score=101, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=41.8181818181818, Blast_Score=98, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6321856, Length=391, Percent_Identity=37.8516624040921, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=37.5, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=38.6842105263158, Blast_Score=263, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6320224, Length=362, Percent_Identity=36.7403314917127, Blast_Score=254, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6324778, Length=378, Percent_Identity=37.8306878306878, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=41.0112359550562, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=38.9204545454545, Blast_Score=243, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=34.3490304709141, Blast_Score=236, Evalue=6e-63, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=36.3143631436314, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=36.3143631436314, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6324620, Length=394, Percent_Identity=35.0253807106599, Blast_Score=224, Evalue=3e-59, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=33.6898395721925, Blast_Score=223, Evalue=4e-59, Organism=Saccharomyces cerevisiae, GI6320173, Length=416, Percent_Identity=30.7692307692308, Blast_Score=213, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=374, Percent_Identity=33.4224598930481, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=386, Percent_Identity=35.2331606217617, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=34.1530054644809, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=30.952380952381, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=34.3406593406593, Blast_Score=194, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=31.5294117647059, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=31.7142857142857, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320400, Length=379, Percent_Identity=32.4538258575198, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=33.6927223719677, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=27.8301886792453, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=28.4403669724771, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=415, Percent_Identity=23.3734939759036, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=406, Percent_Identity=25.1231527093596, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323844, Length=362, Percent_Identity=22.3756906077348, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=41.4285714285714, Blast_Score=270, Evalue=1e-72, Organism=Drosophila melanogaster, GI24645031, Length=379, Percent_Identity=36.9393139841689, Blast_Score=268, Evalue=8e-72, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=40, Blast_Score=265, Evalue=7e-71, Organism=Drosophila melanogaster, GI24585582, Length=377, Percent_Identity=37.6657824933687, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=36.9146005509642, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=37.3937677053824, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=37.4005305039788, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24582080, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24582078, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI17136248, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI24582075, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI21356161, Length=375, Percent_Identity=38.6666666666667, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=37.3297002724796, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644479, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24644487, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI45551833, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644485, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI281361218, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644481, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644483, Length=374, Percent_Identity=35.5614973262032, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.986301369863, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=37.465564738292, Blast_Score=238, Evalue=8e-63, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=34.6260387811634, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=34.6260387811634, Blast_Score=234, Evalue=1e-61, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=34.1880341880342, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=34.1880341880342, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=34.1880341880342, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI17136814, Length=371, Percent_Identity=36.6576819407008, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI28575014, Length=356, Percent_Identity=33.9887640449438, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=34.7826086956522, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI28571808, Length=379, Percent_Identity=33.509234828496, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI28571809, Length=379, Percent_Identity=33.509234828496, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24642822, Length=399, Percent_Identity=32.5814536340852, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24666101, Length=338, Percent_Identity=34.0236686390533, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=32.8042328042328, Blast_Score=178, Evalue=9e-45, Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=29.8153034300792, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24643725, Length=385, Percent_Identity=28.051948051948, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI28571338, Length=420, Percent_Identity=29.5238095238095, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI18859659, Length=420, Percent_Identity=29.5238095238095, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=31.0626702997275, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI20130173, Length=347, Percent_Identity=27.3775216138329, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=25.7225433526012, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=25.8358662613982, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI17136666, Length=393, Percent_Identity=27.735368956743, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24646066, Length=411, Percent_Identity=24.5742092457421, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 55846; Mature: 55846
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCHH IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC EEECCCCCCCCCEEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEE VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD EECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHH DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHEEEEEEC EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI CHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCEE MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL EEEECCCCCEEEEECHHHCCCCCCCHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCEEEE VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS ECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSHKKTPQHERARSFKKGQHRDRHP HHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC KTNHHSKKPKRR CCCCCCCCCCCC >Mature Secondary Structure MELNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCHH IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC EEECCCCCCCCCEEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEE VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD EECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHH DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHEEEEEEC EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI CHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCEE MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL EEEECCCCCEEEEECHHHCCCCCCCHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCEEEE VTPLEYKELLRMQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS ECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSHKKTPQHERARSFKKGQHRDRHP HHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC KTNHHSKKPKRR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA