Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562662

Identifier: 108562662

GI number: 108562662

Start: 241287

End: 241817

Strand: Direct

Name: 108562662

Synonym: HPAG1_0237

Alternate gene names: NA

Gene position: 241287-241817 (Clockwise)

Preceding gene: 108562661

Following gene: 108562675

Centisome position: 15.11

GC content: 39.74

Gene sequence:

>531_bases
ATGAGCGCAATGATGCGTTATTTTCACATCTATGCGACCACTTTTTTCTTCCCTTTGGCTCTTCTTTTTGCGATTAGCGG
GCTTTCATTGCTCTTTGGGGTGCGCCAAGACACTGGCGCTACTATCAAAGAGTGGGTTTTAGAAAAATCCTTAAAAAAAG
AAGAACGATTGGATTTTTTGAAAGACTTTCTAAAAGAAAACCATGTCGCTATGCCTAAAAAGATAGAGCCTAGAGAGCAT
AGGGGAGCGTTGGTTATTGGCACGCCTTTGTATGAAATCAACCTTGAAACTAAAGGCGCTCAAACAAAAATCAAAACCAT
TGAAAGGGGCTTTTTAGGCGCGCTCATCATGCTACATAAGGCTAAAGTGGGCGTTGTGTTTAAAACACTTTTGGGGATTT
TTTGCGTGTTTTTATTGTTGTTTTATGTGAGCGCGTTTTTAATGGTGGCTTTTAAGGACACTAAACGCATGTTTATAAGC
GTTTTAATAGGGTTTGTGGTGTTCTTTGGAGCGATCTATTGGTCTTTATAG

Upstream 100 bases:

>100_bases
CTAACGTGTTTTTTGCTTATGAATCTTGCGCGCTAGGGTTTAGAAAAGGGGGGCTAGTCTTGGATAATTTTTCTAAATTC
GTGAGCCATAGGTTGCAATA

Downstream 100 bases:

>100_bases
GGTTTTAAAATATCAGCTCTGTTTTGGATATTGGTTATGAAATCTAAAAAATACCTTTTGGGTGTTTTTACAACCAAAAT
AAAAAAGCTTGCATCAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSAMMRYFHIYATTFFFPLALLFAISGLSLLFGVRQDTGATIKEWVLEKSLKKEERLDFLKDFLKENHVAMPKKIEPREH
RGALVIGTPLYEINLETKGAQTKIKTIERGFLGALIMLHKAKVGVVFKTLLGIFCVFLLLFYVSAFLMVAFKDTKRMFIS
VLIGFVVFFGAIYWSL

Sequences:

>Translated_176_residues
MSAMMRYFHIYATTFFFPLALLFAISGLSLLFGVRQDTGATIKEWVLEKSLKKEERLDFLKDFLKENHVAMPKKIEPREH
RGALVIGTPLYEINLETKGAQTKIKTIERGFLGALIMLHKAKVGVVFKTLLGIFCVFLLLFYVSAFLMVAFKDTKRMFIS
VLIGFVVFFGAIYWSL
>Mature_175_residues
SAMMRYFHIYATTFFFPLALLFAISGLSLLFGVRQDTGATIKEWVLEKSLKKEERLDFLKDFLKENHVAMPKKIEPREHR
GALVIGTPLYEINLETKGAQTKIKTIERGFLGALIMLHKAKVGVVFKTLLGIFCVFLLLFYVSAFLMVAFKDTKRMFISV
LIGFVVFFGAIYWSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20160; Mature: 20028

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMMRYFHIYATTFFFPLALLFAISGLSLLFGVRQDTGATIKEWVLEKSLKKEERLDFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KDFLKENHVAMPKKIEPREHRGALVIGTPLYEINLETKGAQTKIKTIERGFLGALIMLHK
HHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AKVGVVFKTLLGIFCVFLLLFYVSAFLMVAFKDTKRMFISVLIGFVVFFGAIYWSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAMMRYFHIYATTFFFPLALLFAISGLSLLFGVRQDTGATIKEWVLEKSLKKEERLDFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KDFLKENHVAMPKKIEPREHRGALVIGTPLYEINLETKGAQTKIKTIERGFLGALIMLHK
HHHHHCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AKVGVVFKTLLGIFCVFLLLFYVSAFLMVAFKDTKRMFISVLIGFVVFFGAIYWSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA