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The map label for this gene is 108562635

Identifier: 108562635

GI number: 108562635

Start: 211636

End: 212988

Strand: Direct

Name: 108562635

Synonym: HPAG1_0210

Alternate gene names: NA

Gene position: 211636-212988 (Clockwise)

Preceding gene: 108562631

Following gene: 108562636

Centisome position: 13.26

GC content: 40.28

Gene sequence:

>1353_bases
GTGCTTAATCAAAAAGTTTGGCCAGGGTTTTTGGCTTTGCATGGGGTTTTTCTCAACGCTTTTGAGTATCAAGTGAGCGC
TAGAGTGGGATCGTTTTCGCGCATCGCTTTGAACCAATCAATCATCAATTCCAAAAAAGGGATTTACCCTACAGGGAGTT
ATGTAACCACTACCGGGGCCTTACAAGTTGATGTTAGTTTGCTCCCTAAAGGGATTGAAGATCACAAATTGGGTTTTGGG
GTGGGGGGCGAGATCGGGGCGTTAGCGTATGATTCCACGAAATTTTTGATGGATGAAGCCAACCCTAAGGCAGGGTTTCA
GCCAGCGAACTGGTATTACATGGGGCGATGGGAGGGCTATTTGATGCAACACAGCCAAAATTGGACCAGAGAGCAAAAGG
CTCAAAACGCCAGGCCTTATGTGTTATACAATTTGTATTTAGATTATCAATATAAGGATATTTTTGGGATTAAACTAGGG
CGTTACCCCTCTAAAGCTTTGTTTTTGAGCGGGTTTAATCAAGGGTTTGAGCTTTTTTACCGGTGGAAAAAGTTTAAGAT
AGTGTGGTTTAGCACCTTTGGAAGGGCTTTAGCCAATGAGCAATCCATTAGGGATTTTTACGCTCCTGTCAATTACAAGC
AAAAAATCAACTACGGCATGCACAATTTCAACCTCATTTACGAAAATAAATACATTAGGATTGCGCCTTTTATTTGGTTT
TATCCTAAGAATTTTAACGCTCCTGGATTTGAAATCACCCATGACACAAAGTCTTATTGGGAATCTCTTTGGCGCATCCA
AACGACTTTTTACGCATGGTTTCCTCTCTATAGCGATTATTTGTCTAAAGATTATTACAGAGCCGCTTTAGTGGGTAAAA
AAAGCGCGAGTTTGTTTGTGTTTCAAAGGGTGAATTTCCGATCTTATCGTTTTGGCTGGAGCGTGTATAAGAATTTTGGT
AACGGGAGCGCTCAATTAGGCTGGAACGGCTCACCAGTGGATCCCTTTTATGACACTAAAGACGACACCCCTTATGAAGA
CGCTTATTCCAATTTTTACAACGCTAATTCCATAACCATTAACGCTTTTGTAGGGAAGAGCATTAAGAATCTTTTGGTGC
AATTGTATGGGAAATTGACCTATTCCCCAAGGGCTGATGCGCAAAGCTTAGGGGTTACTTTTAAATATAACCTTAAAAAA
CATATCTATTTCATGCTAATGGTTAATGGCTATCAAATCACGATGCATAAGGGTTATAAGGTAGGGTTTTTTACAAGCGG
TTATAACCCTGATTTCGCTCAAACCATTCAAAACAGAAGCTATTTTATGAGTTCTATGAGTTATCGTTTTTAA

Upstream 100 bases:

>100_bases
TTTTTTTTTTTTTTTTTCAAAACTACAATGAGCGAGCGGCTTTGAGAGTTTGTTTTATGGCATAATATCAGACTTCAATA
AAAAGGTGTTTGATAAAAGG

Downstream 100 bases:

>100_bases
AAAATTAAACATTCTTTCATGTTCTTTTTTAAGCCATAGCATACTCCTTTTAAGCGCGCTTTTATTGTATAATCTTAAAA
ATTTTATTAAAGGAAAAGAT

Product: outer membrane protein HofA

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MLNQKVWPGFLALHGVFLNAFEYQVSARVGSFSRIALNQSIINSKKGIYPTGSYVTTTGALQVDVSLLPKGIEDHKLGFG
VGGEIGALAYDSTKFLMDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLG
RYPSKALFLSGFNQGFELFYRWKKFKIVWFSTFGRALANEQSIRDFYAPVNYKQKINYGMHNFNLIYENKYIRIAPFIWF
YPKNFNAPGFEITHDTKSYWESLWRIQTTFYAWFPLYSDYLSKDYYRAALVGKKSASLFVFQRVNFRSYRFGWSVYKNFG
NGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSITINAFVGKSIKNLLVQLYGKLTYSPRADAQSLGVTFKYNLKK
HIYFMLMVNGYQITMHKGYKVGFFTSGYNPDFAQTIQNRSYFMSSMSYRF

Sequences:

>Translated_450_residues
MLNQKVWPGFLALHGVFLNAFEYQVSARVGSFSRIALNQSIINSKKGIYPTGSYVTTTGALQVDVSLLPKGIEDHKLGFG
VGGEIGALAYDSTKFLMDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLG
RYPSKALFLSGFNQGFELFYRWKKFKIVWFSTFGRALANEQSIRDFYAPVNYKQKINYGMHNFNLIYENKYIRIAPFIWF
YPKNFNAPGFEITHDTKSYWESLWRIQTTFYAWFPLYSDYLSKDYYRAALVGKKSASLFVFQRVNFRSYRFGWSVYKNFG
NGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSITINAFVGKSIKNLLVQLYGKLTYSPRADAQSLGVTFKYNLKK
HIYFMLMVNGYQITMHKGYKVGFFTSGYNPDFAQTIQNRSYFMSSMSYRF
>Mature_450_residues
MLNQKVWPGFLALHGVFLNAFEYQVSARVGSFSRIALNQSIINSKKGIYPTGSYVTTTGALQVDVSLLPKGIEDHKLGFG
VGGEIGALAYDSTKFLMDEANPKAGFQPANWYYMGRWEGYLMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLG
RYPSKALFLSGFNQGFELFYRWKKFKIVWFSTFGRALANEQSIRDFYAPVNYKQKINYGMHNFNLIYENKYIRIAPFIWF
YPKNFNAPGFEITHDTKSYWESLWRIQTTFYAWFPLYSDYLSKDYYRAALVGKKSASLFVFQRVNFRSYRFGWSVYKNFG
NGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSITINAFVGKSIKNLLVQLYGKLTYSPRADAQSLGVTFKYNLKK
HIYFMLMVNGYQITMHKGYKVGFFTSGYNPDFAQTIQNRSYFMSSMSYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52490; Mature: 52490

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQKVWPGFLALHGVFLNAFEYQVSARVGSFSRIALNQSIINSKKGIYPTGSYVTTTGA
CCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHHCCCCCCCCCCCEEEECCE
LQVDVSLLPKGIEDHKLGFGVGGEIGALAYDSTKFLMDEANPKAGFQPANWYYMGRWEGY
EEEEHEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECEE
LMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLGRYPSKALFLSGFNQGFELFY
EEECCCCCCHHHHHCCCCCEEEEEEEEEEEECEEEEEEECCCCCCEEEEECCCCCHHEEE
RWKKFKIVWFSTFGRALANEQSIRDFYAPVNYKQKINYGMHNFNLIYENKYIRIAPFIWF
EEEEEEEEEEEHHHHHHCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEECCEEEEEEEEEE
YPKNFNAPGFEITHDTKSYWESLWRIQTTFYAWFPLYSDYLSKDYYRAALVGKKSASLFV
ECCCCCCCCEEEECCHHHHHHHHHHHHHHEEEEHHHHHHHHCCHHEEEEEECCCCCEEEE
FQRVNFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSITI
EEECCCCEEEECHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE
NAFVGKSIKNLLVQLYGKLTYSPRADAQSLGVTFKYNLKKHIYFMLMVNGYQITMHKGYK
EEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEECCEEEEEEEEEECEEEEEECCEE
VGFFTSGYNPDFAQTIQNRSYFMSSMSYRF
EEEEECCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLNQKVWPGFLALHGVFLNAFEYQVSARVGSFSRIALNQSIINSKKGIYPTGSYVTTTGA
CCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEHHHHHHCCCCCCCCCCCEEEECCE
LQVDVSLLPKGIEDHKLGFGVGGEIGALAYDSTKFLMDEANPKAGFQPANWYYMGRWEGY
EEEEHEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCEEEEEEECEE
LMQHSQNWTREQKAQNARPYVLYNLYLDYQYKDIFGIKLGRYPSKALFLSGFNQGFELFY
EEECCCCCCHHHHHCCCCCEEEEEEEEEEEECEEEEEEECCCCCCEEEEECCCCCHHEEE
RWKKFKIVWFSTFGRALANEQSIRDFYAPVNYKQKINYGMHNFNLIYENKYIRIAPFIWF
EEEEEEEEEEEHHHHHHCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEECCEEEEEEEEEE
YPKNFNAPGFEITHDTKSYWESLWRIQTTFYAWFPLYSDYLSKDYYRAALVGKKSASLFV
ECCCCCCCCEEEECCHHHHHHHHHHHHHHEEEEHHHHHHHHCCHHEEEEEECCCCCEEEE
FQRVNFRSYRFGWSVYKNFGNGSAQLGWNGSPVDPFYDTKDDTPYEDAYSNFYNANSITI
EEECCCCEEEECHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE
NAFVGKSIKNLLVQLYGKLTYSPRADAQSLGVTFKYNLKKHIYFMLMVNGYQITMHKGYK
EEEHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEECCEEEEEEEEEECEEEEEECCEE
VGFFTSGYNPDFAQTIQNRSYFMSSMSYRF
EEEEECCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA