| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is htpG [H]
Identifier: 108562636
GI number: 108562636
Start: 213091
End: 214956
Strand: Direct
Name: htpG [H]
Synonym: HPAG1_0211
Alternate gene names: 108562636
Gene position: 213091-214956 (Clockwise)
Preceding gene: 108562635
Following gene: 108562640
Centisome position: 13.35
GC content: 37.57
Gene sequence:
>1866_bases ATGTCTAATCAAGAATACACCTTTCAAACTGAAATCAACCAGCTTTTGGATTTGATGATCCACTCTTTGTATTCCAATAA AGAGATTTTTTTAAGAGAGTTGATTTCTAACGCGAGCGACGCTTTGGACAAGCTGAATTATTTAATGCTGACCGATGAGA AATTAAAAGGGCTGAATATTACGCCTAGCATTCATTTGAGCTTTGATAGCCAGAAAAAAACCTTAACGATTAAAGATAAT GGTATAGGCATGGATAAAAACGATCTCATTGAGCATCTAGGCACGATCGCCAAATCAGGCACGAAGAGTTTTTTAAGCGC TTTGAGTGGGGATAAGAAAAAAGATAGCGCCTTGATTGGCCAGTTTGGCGTGGGCTTTTATTCGGCGTTTATGGTAGCGA GTAAGATTGTCGTTCAAACCAAGAAAGTTACTAATCATCAAGCTTATGCATGGGTGAGCGATGGTAAGGGCAAGTTTGAA ATCAGCGAATGCGTCAAAGAGGAGCAAGGCACAGAAATCACCCTCTTTTTAAAAGAAGAAGATTCTCATTTTGCGAGCCG TTGGGAGATTGATGGCATTGTTAAAAAGTATTCTGAGCATATCCCTTTCCCTATTTTTTTAACTTACACCGATACGAAAT TTGAGGGCGAAGGGGATCATAAAAAAGAAGTTAAAGAAGAAAAATGCGATCAGATCAATCAAGCGAGCGCTTTATGGAAA ATGAATAAGAGCGAATTAAAAGACAAGGATTACAAAGACTTTTACCAATCGTTTGCACATGACAACAGCGAGCCTTTGAG CTATATCCATAATAAAGTGGAAGGCTCTTTAGAATACACAACGCTTTTTTATATTCCTAGCAAAGCACCCTTTGACATGT TTAGGGTGGATTATAAAAGCGGGGTCAAACTTTATGTTAAAAGGGTGTTTATCACTGATGATGACAAAGAATTGTTGCCC TCTTATTTGAGGTTTGTTAAAGGCGTGATTGACAGCGAAGATTTACCCTTGAACGTGAGCCGTGAAATCTTGCAACAAAA CAAGATTTTAGCCAATATCCGTTCGGCTTCAGTGAAAAAGATTTTAAGCGAGATTGAACGCTTGAGCAAGGATGAAAAAA ATTACCATAAATTCTATGAGCCTTTTGGGAAAGTGTTAAAAGAAGGCTTGTATGGGGATTTTGAAAACAAAGAAAAACTT TTAGAATTGTTAAGATTCTATTCTAAAGACAAAGAAAAATTAATTTCTTTAAAAGAATACAGAGAAAATTTAAAAGAAAA TCAAAAAAGCATTTACTACCTTTTGGGCGAAAATTTAGACTTATTAAAGGCGTCCCCGCTTTTAGAAAAATACGCTCAAA AAGGCTATGATGTTTTGTTATTGAGCGATGAGATTGATGCGTTTGTGATGCCAGGCGTGAATGAATACGATAAAACGCCC TTTAGAGACGCTAGCCATAGCGAGAGTTTGAAAGAGCTTGGTTTGGAAGAAATCAACGATGAGGTAAAAGATCAGTTTAA AGATTTAATGAAAGCGTTTGAAGAAAATCTTAAAGATGAGATTAAAGGCGTGGAGCTTTCTAGCCATCTCACTTCAGCGG TGGCTTTAATAGGCGATGAACAAAATGCGATGATGGCTAATTTTATGCGCCAAATGGGCCAAAGCGTGCCTGAAAGCAAG AAAACTTTAGAATTAAACCCTAACCATGCGATTTTGCAAAAACTCTTAAAGTGCGAAGATAAAGAGCAGTTGAGCGCTTT TATCTGGTTGCTTTATGATGGGGCGAAGCTTTTAGAAAAAGGGGCTTTGAAAGACGCTAAAAGCTTTAATGAGCGCCTAA ATAGCGTGCTGTTGAAAGCGTTGTAA
Upstream 100 bases:
>100_bases AATTAAACATTCTTTCATGTTCTTTTTTAAGCCATAGCATACTCCTTTTAAGCGCGCTTTTATTGTATAATCTTAAAAAT TTTATTAAAGGAAAAGATCG
Downstream 100 bases:
>100_bases GGGGGTAAAACCCTTTTTAGGGGTTTGAATAAAAATGCTTAAATCTTTCAAACACTAATAGAAAAAGGGGCTTTAAAAGA CGCTAAAAGTTTTAATGAGC
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNITPSIHLSFDSQKKTLTIKDN GIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVTNHQAYAWVSDGKGKFE ISECVKEEQGTEITLFLKEEDSHFASRWEIDGIVKKYSEHIPFPIFLTYTDTKFEGEGDHKKEVKEEKCDQINQASALWK MNKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKSGVKLYVKRVFITDDDKELLP SYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKL LELLRFYSKDKEKLISLKEYRENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP FRDASHSESLKELGLEEINDEVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANFMRQMGQSVPESK KTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL
Sequences:
>Translated_621_residues MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNITPSIHLSFDSQKKTLTIKDN GIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVTNHQAYAWVSDGKGKFE ISECVKEEQGTEITLFLKEEDSHFASRWEIDGIVKKYSEHIPFPIFLTYTDTKFEGEGDHKKEVKEEKCDQINQASALWK MNKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKSGVKLYVKRVFITDDDKELLP SYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKL LELLRFYSKDKEKLISLKEYRENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP FRDASHSESLKELGLEEINDEVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANFMRQMGQSVPESK KTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL >Mature_620_residues SNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNITPSIHLSFDSQKKTLTIKDNG IGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVASKIVVQTKKVTNHQAYAWVSDGKGKFEI SECVKEEQGTEITLFLKEEDSHFASRWEIDGIVKKYSEHIPFPIFLTYTDTKFEGEGDHKKEVKEEKCDQINQASALWKM NKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKSGVKLYVKRVFITDDDKELLPS YLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKKILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLL ELLRFYSKDKEKLISLKEYRENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTPF RDASHSESLKELGLEEINDEVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDEQNAMMANFMRQMGQSVPESKK TLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEKGALKDAKSFNERLNSVLLKAL
Specific function: Molecular chaperone. Has ATPase activity [H]
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family [H]
Homologues:
Organism=Homo sapiens, GI155722983, Length=644, Percent_Identity=32.6086956521739, Blast_Score=346, Evalue=4e-95, Organism=Homo sapiens, GI154146191, Length=401, Percent_Identity=34.9127182044888, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI153792590, Length=401, Percent_Identity=34.9127182044888, Blast_Score=233, Evalue=5e-61, Organism=Homo sapiens, GI20149594, Length=401, Percent_Identity=34.9127182044888, Blast_Score=232, Evalue=9e-61, Organism=Homo sapiens, GI4507677, Length=210, Percent_Identity=46.6666666666667, Blast_Score=176, Evalue=4e-44, Organism=Escherichia coli, GI1786679, Length=635, Percent_Identity=46.1417322834646, Blast_Score=546, Evalue=1e-156, Organism=Caenorhabditis elegans, GI17559162, Length=656, Percent_Identity=37.8048780487805, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17542208, Length=669, Percent_Identity=36.1733931240658, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI115535205, Length=645, Percent_Identity=32.5581395348837, Blast_Score=293, Evalue=2e-79, Organism=Caenorhabditis elegans, GI115535167, Length=438, Percent_Identity=36.3013698630137, Blast_Score=254, Evalue=9e-68, Organism=Saccharomyces cerevisiae, GI6323840, Length=685, Percent_Identity=36.9343065693431, Blast_Score=395, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6325016, Length=215, Percent_Identity=46.5116279069767, Blast_Score=178, Evalue=2e-45, Organism=Drosophila melanogaster, GI17647529, Length=650, Percent_Identity=36.6153846153846, Blast_Score=380, Evalue=1e-105, Organism=Drosophila melanogaster, GI21357739, Length=632, Percent_Identity=37.5, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24586016, Length=648, Percent_Identity=33.0246913580247, Blast_Score=321, Evalue=1e-87,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 [H]
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90 [H]
EC number: NA
Molecular weight: Translated: 71334; Mature: 71203
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNI CCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC TPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIG CCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH QFGVGFYSAFMVASKIVVQTKKVTNHQAYAWVSDGKGKFEISECVKEEQGTEITLFLKEE HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECC DSHFASRWEIDGIVKKYSEHIPFPIFLTYTDTKFEGEGDHKKEVKEEKCDQINQASALWK CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHH MNKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKS CCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHC GVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKK CCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKEKLISLKEY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH RENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP HHHHHHCCCEEEEEECCCCCHHHCCHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCC FRDASHSESLKELGLEEINDEVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC QNAMMANFMRQMGQSVPESKKTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEK CHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH GALKDAKSFNERLNSVLLKAL HCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNQEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKLKGLNI CCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCC TPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIG CCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH QFGVGFYSAFMVASKIVVQTKKVTNHQAYAWVSDGKGKFEISECVKEEQGTEITLFLKEE HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEECC DSHFASRWEIDGIVKKYSEHIPFPIFLTYTDTKFEGEGDHKKEVKEEKCDQINQASALWK CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHH MNKSELKDKDYKDFYQSFAHDNSEPLSYIHNKVEGSLEYTTLFYIPSKAPFDMFRVDYKS CCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHC GVKLYVKRVFITDDDKELLPSYLRFVKGVIDSEDLPLNVSREILQQNKILANIRSASVKK CCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ILSEIERLSKDEKNYHKFYEPFGKVLKEGLYGDFENKEKLLELLRFYSKDKEKLISLKEY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH RENLKENQKSIYYLLGENLDLLKASPLLEKYAQKGYDVLLLSDEIDAFVMPGVNEYDKTP HHHHHHCCCEEEEEECCCCCHHHCCHHHHHHHHCCCEEEEEECCCCEEECCCCCCCCCCC FRDASHSESLKELGLEEINDEVKDQFKDLMKAFEENLKDEIKGVELSSHLTSAVALIGDE CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC QNAMMANFMRQMGQSVPESKKTLELNPNHAILQKLLKCEDKEQLSAFIWLLYDGAKLLEK CHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHH GALKDAKSFNERLNSVLLKAL HCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA