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The map label for this gene is 108562626

Identifier: 108562626

GI number: 108562626

Start: 205999

End: 207228

Strand: Reverse

Name: 108562626

Synonym: HPAG1_0201

Alternate gene names: NA

Gene position: 207228-205999 (Counterclockwise)

Preceding gene: 108562627

Following gene: 108562625

Centisome position: 12.98

GC content: 38.37

Gene sequence:

>1230_bases
ATGACCTTGACTGAACGTCATATTATTAGACCCACGCACCCCATTTTTAAACGCATTAAGGACTTTTGCCATCTGTCTAA
AAACCTTTACAACTACGCTAATTTTATTTTAAGAGAGCATTACTTTGCAGGTTTTAAGTTGCCTACAGCCTACGATTTAA
TCAATCGCTTTGTTAAAGAAAGCCAAAGAGATTACAAAGCTTTACCTGCCCAAAGCGCGCAACAGGTATTAATGCTTTTA
TCTCAAAATTGGAAAAGCTATTTAAAAGCCCTTAAAGCTTACAAACTCAAGCCTTCTAGCTTTCTAGCACGTCCAAAAAT
CCCTAAATTCAAACCAAAAGATGGCGTATCTATAGGGGTTTTAACAAACCAGCAAACTAGCTTTACGAAAGGACGCATGA
CAAAAATTAAATTCCCAAAAAAAGCTAATTTAAAAAGACTTATCACTAAAATAAACCCTCAAACTTCTAGGCTAAAGCAA
GTACGCTTAATCCCTAAAACCACTTGTTTTATCGTGGAAGTTGTCTATGAGCAAACCACGCACAAACTTCCACAAACTCA
TGGCGTTGGCATTATGGGTATTGATCTAGGCTTGAACAACTTCGTAACTGCAATAGATAATCAAAGTAGTCCTTTTATTA
TCAAAGGCGGAGGGGTGAAGTCTGTCAATCAGTGGTTTAACAAACTCAAAGCCCATTATCAAGCCAAAGCCAAGACTTCA
AATAAGCACTTTTGGACAAAACGCTTAGGCAAATTAGCTCTATGGCGGGAGTGTAAAGTCAATGATTTTATGCACAATGC
GAGCGCCTATGTGGTGGGGCATTGCTTAAAAAAGGGCATTTCTACAATTGTCATCGGTAAAAATGATGGTTGGAAACAAA
AGCTAAAGCTAGGCAAGAGAACCAATCAGAACTTTACTAATATCCCTTATGAATCCTTTATTGAAAAACTAGCCTACAAG
TGTGCTTTGGTTGGGATAACTTTGCATACAACAGAAGAGAGATTTACGAGCAAGTGCGACCACTTGGCTAACGAACCCAT
GCAGCACCACGAGCAATATTTAGGTAAAAGAGTTAAACGAGGGCTATTTAAATCTAGCATAGGCAAATCCCTAAACGCCG
ATATTAACGGTGCAATCGGCATTTTAAGAAAAGTATTCCCTGATGCAGTGAAAACTCTAAGGGATAGCGGAGTAGTGTTT
ACTCCAGTAAAAATCTCGTTGGCGTTTTAA

Upstream 100 bases:

>100_bases
TTTTCTATGAAGATGTATTCTAAGCACCGCATTGCTAAAAAGTTGCTTTTAGAGAGTAAGGTTAATCCAGCCTTGCTAAA
ATCTCTTAATGGGGGAACAG

Downstream 100 bases:

>100_bases
ACACGATGGGAAAATTTACAAAAAATAACTTTTTAAATACTTTTAATAAGATTAAAGAGTTTTTTAGACATCAGAAATTT
ATTCTTATTTTAAAAAACTT

Product: putative transposase OrfB

Products: NA

Alternate protein names: Transposase ORF_B; IS Element ISTsi3 OrfB Probably Transposase; Transposase Family; ISSoc6 OrfB Transposase; Transposase Orf_b; Transposase Family Protein; IS Element ISTsi2 OrfB Probably Transposase; Neutral Protease; Transposase OrfB; Transposase IS

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MTLTERHIIRPTHPIFKRIKDFCHLSKNLYNYANFILREHYFAGFKLPTAYDLINRFVKESQRDYKALPAQSAQQVLMLL
SQNWKSYLKALKAYKLKPSSFLARPKIPKFKPKDGVSIGVLTNQQTSFTKGRMTKIKFPKKANLKRLITKINPQTSRLKQ
VRLIPKTTCFIVEVVYEQTTHKLPQTHGVGIMGIDLGLNNFVTAIDNQSSPFIIKGGGVKSVNQWFNKLKAHYQAKAKTS
NKHFWTKRLGKLALWRECKVNDFMHNASAYVVGHCLKKGISTIVIGKNDGWKQKLKLGKRTNQNFTNIPYESFIEKLAYK
CALVGITLHTTEERFTSKCDHLANEPMQHHEQYLGKRVKRGLFKSSIGKSLNADINGAIGILRKVFPDAVKTLRDSGVVF
TPVKISLAF

Sequences:

>Translated_409_residues
MTLTERHIIRPTHPIFKRIKDFCHLSKNLYNYANFILREHYFAGFKLPTAYDLINRFVKESQRDYKALPAQSAQQVLMLL
SQNWKSYLKALKAYKLKPSSFLARPKIPKFKPKDGVSIGVLTNQQTSFTKGRMTKIKFPKKANLKRLITKINPQTSRLKQ
VRLIPKTTCFIVEVVYEQTTHKLPQTHGVGIMGIDLGLNNFVTAIDNQSSPFIIKGGGVKSVNQWFNKLKAHYQAKAKTS
NKHFWTKRLGKLALWRECKVNDFMHNASAYVVGHCLKKGISTIVIGKNDGWKQKLKLGKRTNQNFTNIPYESFIEKLAYK
CALVGITLHTTEERFTSKCDHLANEPMQHHEQYLGKRVKRGLFKSSIGKSLNADINGAIGILRKVFPDAVKTLRDSGVVF
TPVKISLAF
>Mature_408_residues
TLTERHIIRPTHPIFKRIKDFCHLSKNLYNYANFILREHYFAGFKLPTAYDLINRFVKESQRDYKALPAQSAQQVLMLLS
QNWKSYLKALKAYKLKPSSFLARPKIPKFKPKDGVSIGVLTNQQTSFTKGRMTKIKFPKKANLKRLITKINPQTSRLKQV
RLIPKTTCFIVEVVYEQTTHKLPQTHGVGIMGIDLGLNNFVTAIDNQSSPFIIKGGGVKSVNQWFNKLKAHYQAKAKTSN
KHFWTKRLGKLALWRECKVNDFMHNASAYVVGHCLKKGISTIVIGKNDGWKQKLKLGKRTNQNFTNIPYESFIEKLAYKC
ALVGITLHTTEERFTSKCDHLANEPMQHHEQYLGKRVKRGLFKSSIGKSLNADINGAIGILRKVFPDAVKTLRDSGVVFT
PVKISLAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46709; Mature: 46578

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTERHIIRPTHPIFKRIKDFCHLSKNLYNYANFILREHYFAGFKLPTAYDLINRFVKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SQRDYKALPAQSAQQVLMLLSQNWKSYLKALKAYKLKPSSFLARPKIPKFKPKDGVSIGV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEEE
LTNQQTSFTKGRMTKIKFPKKANLKRLITKINPQTSRLKQVRLIPKTTCFIVEVVYEQTT
EECCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
HKLPQTHGVGIMGIDLGLNNFVTAIDNQSSPFIIKGGGVKSVNQWFNKLKAHYQAKAKTS
HCCCCCCCCEEEEEECCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCC
NKHFWTKRLGKLALWRECKVNDFMHNASAYVVGHCLKKGISTIVIGKNDGWKQKLKLGKR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCC
TNQNFTNIPYESFIEKLAYKCALVGITLHTTEERFTSKCDHLANEPMQHHEQYLGKRVKR
CCCCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GLFKSSIGKSLNADINGAIGILRKVFPDAVKTLRDSGVVFTPVKISLAF
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEC
>Mature Secondary Structure 
TLTERHIIRPTHPIFKRIKDFCHLSKNLYNYANFILREHYFAGFKLPTAYDLINRFVKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SQRDYKALPAQSAQQVLMLLSQNWKSYLKALKAYKLKPSSFLARPKIPKFKPKDGVSIGV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCEEEE
LTNQQTSFTKGRMTKIKFPKKANLKRLITKINPQTSRLKQVRLIPKTTCFIVEVVYEQTT
EECCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
HKLPQTHGVGIMGIDLGLNNFVTAIDNQSSPFIIKGGGVKSVNQWFNKLKAHYQAKAKTS
HCCCCCCCCEEEEEECCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCC
NKHFWTKRLGKLALWRECKVNDFMHNASAYVVGHCLKKGISTIVIGKNDGWKQKLKLGKR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCC
TNQNFTNIPYESFIEKLAYKCALVGITLHTTEERFTSKCDHLANEPMQHHEQYLGKRVKR
CCCCCCCCCHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GLFKSSIGKSLNADINGAIGILRKVFPDAVKTLRDSGVVFTPVKISLAF
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA