Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562591

Identifier: 108562591

GI number: 108562591

Start: 172016

End: 172747

Strand: Reverse

Name: 108562591

Synonym: HPAG1_0166

Alternate gene names: NA

Gene position: 172747-172016 (Counterclockwise)

Preceding gene: 108562592

Following gene: 108562590

Centisome position: 10.82

GC content: 41.67

Gene sequence:

>732_bases
ATGACACAAGAAGAATTAGACGCTTTGATGAATGGTGGCGATTTGGAAAACTTGGAAGCCTTAGAGGCTAAAGAAGAGGC
TAAAGAGGAAGCTAAAGAGAAAGAAGAGGTTAAAGAATCCAAAGAAAGCTCTAGCCAAAAAATGACCGTCAAAAAAGAAG
ACGCTGAAAAATACGGCAAGATTAGCCCTAATGAATGGCCTCCCCCTCCCCCCACTGAAGAGCATAAAGTCGTGCATCAA
TTAGATGATGTTACAAGAGATTCTGAAGTGAAAGCCACGCAAATTTTTGATCAATTGGATTTGATCGGAGCTAGTGCTGA
AAAGATCGCTAAAATGGTTAAAAAAATCCAAGAACCTTTGCAAAAACACCAAGAAATTTTTGACAATTTGCATGGCCATT
TCCCCCATGTGGAATCTTTTAAAGTCGCGCTCAATGAGCAGCAAGAAATCCTAAACGCCCTTAAAAGCATTGAAGAAGAA
GCCGCTAATTGCTCTGATAGCTCCATGCAAGCGATGGATATTATGCAGTTTCAAGACATCCACCGCCAAAAAATTGAACG
AGTGGTCAATGTCATGCGAGCGCTCAGCCAATACATGAATTCGCTTTTTGAAGGCAAAATTGATGATTCTAAGCGCGTGA
GTTCAGCGACTTTTATCACCGGCGATGACGATAAAGATTTAGCCAGCGCGGATGATATTGAAGCCTTGATCGCTTCTTTT
GGAGCCAAGTAG

Upstream 100 bases:

>100_bases
AGGGCGTTTTGATTGCTAAAGCTTAAGTGCGCTAAAATGACAGCTAATCAGTTATGGTTACTATAAAACGCTTTTTAAAA
CCAATTGGCAAGGAACAACA

Downstream 100 bases:

>100_bases
TTTTGAGTCAAGTTGAATTACTCTCTCCAGCTGGTAATTTAAAAAAACTTAAAATCGCTCTCAACTATGGGGCTGATGCG
GTTTATGGGGGAGTGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTQEELDALMNGGDLENLEALEAKEEAKEEAKEKEEVKESKESSSQKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQ
LDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESFKVALNEQQEILNALKSIEEE
AANCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASADDIEALIASF
GAK

Sequences:

>Translated_243_residues
MTQEELDALMNGGDLENLEALEAKEEAKEEAKEKEEVKESKESSSQKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQ
LDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESFKVALNEQQEILNALKSIEEE
AANCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASADDIEALIASF
GAK
>Mature_242_residues
TQEELDALMNGGDLENLEALEAKEEAKEEAKEKEEVKESKESSSQKMTVKKEDAEKYGKISPNEWPPPPPTEEHKVVHQL
DDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPLQKHQEIFDNLHGHFPHVESFKVALNEQQEILNALKSIEEEA
ANCSDSSMQAMDIMQFQDIHRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASADDIEALIASFG
AK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27389; Mature: 27258

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQEELDALMNGGDLENLEALEAKEEAKEEAKEKEEVKESKESSSQKMTVKKEDAEKYGK
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
ISPNEWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QKHQEIFDNLHGHFPHVESFKVALNEQQEILNALKSIEEEAANCSDSSMQAMDIMQFQDI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASADDIEALIASF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH
GAK
CCC
>Mature Secondary Structure 
TQEELDALMNGGDLENLEALEAKEEAKEEAKEKEEVKESKESSSQKMTVKKEDAEKYGK
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC
ISPNEWPPPPPTEEHKVVHQLDDVTRDSEVKATQIFDQLDLIGASAEKIAKMVKKIQEPL
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QKHQEIFDNLHGHFPHVESFKVALNEQQEILNALKSIEEEAANCSDSSMQAMDIMQFQDI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
HRQKIERVVNVMRALSQYMNSLFEGKIDDSKRVSSATFITGDDDKDLASADDIEALIASF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEECCCCCCCCCHHHHHHHHHHH
GAK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA