Click here to switch to the map view.

The map label for this gene is yegQ [C]

Identifier: 108562590

GI number: 108562590

Start: 170745

End: 172013

Strand: Reverse

Name: yegQ [C]

Synonym: HPAG1_0165

Alternate gene names: 108562590

Gene position: 172013-170745 (Counterclockwise)

Preceding gene: 108562591

Following gene: 108562589

Centisome position: 10.78

GC content: 42.0

Gene sequence:

>1269_bases
TTGAGTCAAGTTGAATTACTCTCTCCAGCTGGTAATTTAAAAAAACTTAAAATCGCTCTCAACTATGGGGCTGATGCGGT
TTATGGGGGAGTGAGCCATTTTTCTTTACGCAATCGTGCAGGCAAAGAATTTACTTTAGAAACCTTTAAAGAAGGGATTG
ACTACGCCCATGCACTAAATAAAAAAGTCTATGCCACGATCAATGGTTTCCCTTTCAATTCACAGCTCAAACTTTTAGAA
GAACATATTGATAAAATGGCAGAATTAGAGCCGGACGCTTTTATTATCGCTGCGCCTGGTGTGGTGAAACTCGCTTTAAA
AATCGCCCCGCATATTCCCATCCATTTATCCACGCAAGCGAATGTCTTAAATTTGCTAGATGCGCAAGTGTTTTATGATT
TAGGGGTTAAACGCATTGTGTGCGCGAGGGAATTGAGCCTGAATGATGCGATTGAAATTAAAAAAGCCTTACCCGATTTA
GAATTAGAAATCTTTGTGCATGGGAGCATGTGCTTTGCCTTTTCAGGGCGTTGCTTGATTTCGGCTTTACAAAAGGGGCG
CGTGCCTAATAGAGGGAGTTGCGCGAATGATTGCCGGTTTGATTATGAATATTATGTGAAAAACCCGGATAACGGCGTGA
TGATGAGGTTGGTTGAAGAAGAGGGCGTAGGCACGCACATTTTTAACGCTAAAGATTTGAACCTTTCTAACCATATCGCT
GAAATTTTAAGTTCAAACGCCATTAGCGCGCTTAAGATTGAAGGGCGCACCAAGTCCAGTTACTACGCCGCGCAAACCAC
GCGCATCTATCGTTTAGCGGTTGATGATTTTTACCATAACACCTTAAAGCCGAGTTTTTATGCTAGCGAATTGAACACGC
TTAAAAACAGGGGTTTTACGGACGGCTATTTGATGCGAAGGCCTTTTGAAAGGTTGGATACTCAAAACCACCAGACAGCC
ATTAGCGAAGGGGATTTTCAAGTCAATGGCGAAATCACAGAAGACGGGCGTTTTTTTGCATGCAAATTCACCACTACCAC
TAACATAGCTTATGAAATCATCGCTCCCAAAAATGCGGCTATCACGCCCATAGTCAATGAAATTGGCAAGATTTACACCT
TTGAAAAACGCTCTTATTTAGTGCTGTATAAAATCCTTTTAGAAAATAACACCGAGTTAGAAACTATCCATAGCGGGAAT
GTGAATTTAGTGCGATTGCCCGCACCCTTACCGGCTTTTAGTTTTTTACGCACCCAAGTCAGAGTCTAA

Upstream 100 bases:

>100_bases
GCGTGAGTTCAGCGACTTTTATCACCGGCGATGACGATAAAGATTTAGCCAGCGCGGATGATATTGAAGCCTTGATCGCT
TCTTTTGGAGCCAAGTAGTT

Downstream 100 bases:

>100_bases
AAATGGCGTTTAGAGATTAGGGATTAAAAACGATTAAGAGGAACGCATGCCATTAGAAACTATCACGCTCGCTAATATTT
ATGAAGAACAAGGGTTTTTT

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MSQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALNKKVYATINGFPFNSQLKLLE
EHIDKMAELEPDAFIIAAPGVVKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDL
ELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTA
ISEGDFQVNGEITEDGRFFACKFTTTTNIAYEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGN
VNLVRLPAPLPAFSFLRTQVRV

Sequences:

>Translated_422_residues
MSQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALNKKVYATINGFPFNSQLKLLE
EHIDKMAELEPDAFIIAAPGVVKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDL
ELEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTA
ISEGDFQVNGEITEDGRFFACKFTTTTNIAYEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGN
VNLVRLPAPLPAFSFLRTQVRV
>Mature_421_residues
SQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALNKKVYATINGFPFNSQLKLLEE
HIDKMAELEPDAFIIAAPGVVKLALKIAPHIPIHLSTQANVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDLE
LEIFVHGSMCFAFSGRCLISALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIAE
ILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFTDGYLMRRPFERLDTQNHQTAI
SEGDFQVNGEITEDGRFFACKFTTTTNIAYEIIAPKNAAITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGNV
NLVRLPAPLPAFSFLRTQVRV

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=400, Percent_Identity=36.75, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI87081910, Length=273, Percent_Identity=32.967032967033, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1789548, Length=299, Percent_Identity=31.1036789297659, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47319; Mature: 47188

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALN
CCCCEEECCCCCCEEEEEEEECCCCHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHCC
KKVYATINGFPFNSQLKLLEEHIDKMAELEPDAFIIAAPGVVKLALKIAPHIPIHLSTQA
CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEECCCCCCEEECCCC
NVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDLELEIFVHGSMCFAFSGRCLI
HHHHHHHHHHHHHCCHHHEEHHHHCCCCHHHHHHHHCCCCEEEEEEECCEEEEECCHHHH
SALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
HHHHHCCCCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHH
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFT
HHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCC
DGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNIAYEIIAPKNAA
CCHHHCCCHHHHCCCCCCEEECCCCEEECCEEECCCCEEEEEEEEECCEEEEEECCCCCC
ITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQV
CCHHHHHCCCEEEECCCCEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHH
RV
CC
>Mature Secondary Structure 
SQVELLSPAGNLKKLKIALNYGADAVYGGVSHFSLRNRAGKEFTLETFKEGIDYAHALN
CCCEEECCCCCCEEEEEEEECCCCHHHCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHCC
KKVYATINGFPFNSQLKLLEEHIDKMAELEPDAFIIAAPGVVKLALKIAPHIPIHLSTQA
CEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHEEEEECCCCCCEEECCCC
NVLNLLDAQVFYDLGVKRIVCARELSLNDAIEIKKALPDLELEIFVHGSMCFAFSGRCLI
HHHHHHHHHHHHHCCHHHEEHHHHCCCCHHHHHHHHCCCCEEEEEEECCEEEEECCHHHH
SALQKGRVPNRGSCANDCRFDYEYYVKNPDNGVMMRLVEEEGVGTHIFNAKDLNLSNHIA
HHHHHCCCCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCHHHHHH
EILSSNAISALKIEGRTKSSYYAAQTTRIYRLAVDDFYHNTLKPSFYASELNTLKNRGFT
HHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEEEHHHHHCCCCCCHHHHHHHHHHHCCCC
DGYLMRRPFERLDTQNHQTAISEGDFQVNGEITEDGRFFACKFTTTTNIAYEIIAPKNAA
CCHHHCCCHHHHCCCCCCEEECCCCEEECCEEECCCCEEEEEEEEECCEEEEEECCCCCC
ITPIVNEIGKIYTFEKRSYLVLYKILLENNTELETIHSGNVNLVRLPAPLPAFSFLRTQV
CCHHHHHCCCEEEECCCCEEEEEEEECCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHH
RV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]