| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108562589
Identifier: 108562589
GI number: 108562589
Start: 170435
End: 170698
Strand: Reverse
Name: 108562589
Synonym: HPAG1_0164
Alternate gene names: NA
Gene position: 170698-170435 (Counterclockwise)
Preceding gene: 108562590
Following gene: 108562588
Centisome position: 10.69
GC content: 33.33
Gene sequence:
>264_bases ATGCCATTAGAAACTATCACGCTCGCTAATATTTATGAAGAACAAGGGTTTTTTGAAGAAGCGTTGCAAATTTATATTAA TATTTTAAAAAAAACCCCTGACCATATAGAGGCGTTAAAGCAAATGAAGCGTTTGGAAAAAATCCAAAAAAATTGCACTC CTTTCAAACACGATGCATTGTTAGAGCGGCATTATTTAAATTTTATCAAAGGGGATCGTTTGAGCGTTGAGAATTTAGAA AAATGGCTGGTAGAATGGAATTGA
Upstream 100 bases:
>100_bases TTGCCCGCACCCTTACCGGCTTTTAGTTTTTTACGCACCCAAGTCAGAGTCTAAAAATGGCGTTTAGAGATTAGGGATTA AAAACGATTAAGAGGAACGC
Downstream 100 bases:
>100_bases AAAACATTATTTCAGAAACCCTTAATGAAATTGAAAAAATGGCTAAAACTATTGACAATAACTTTGATGCGGCACAAAAA ACGCCCTCTTTTTTCAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MPLETITLANIYEEQGFFEEALQIYINILKKTPDHIEALKQMKRLEKIQKNCTPFKHDALLERHYLNFIKGDRLSVENLE KWLVEWN
Sequences:
>Translated_87_residues MPLETITLANIYEEQGFFEEALQIYINILKKTPDHIEALKQMKRLEKIQKNCTPFKHDALLERHYLNFIKGDRLSVENLE KWLVEWN >Mature_86_residues PLETITLANIYEEQGFFEEALQIYINILKKTPDHIEALKQMKRLEKIQKNCTPFKHDALLERHYLNFIKGDRLSVENLEK WLVEWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10473; Mature: 10342
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLETITLANIYEEQGFFEEALQIYINILKKTPDHIEALKQMKRLEKIQKNCTPFKHDAL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LERHYLNFIKGDRLSVENLEKWLVEWN HHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure PLETITLANIYEEQGFFEEALQIYINILKKTPDHIEALKQMKRLEKIQKNCTPFKHDAL CCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH LERHYLNFIKGDRLSVENLEKWLVEWN HHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA