Click here to switch to the map view.

The map label for this gene is 108562588

Identifier: 108562588

GI number: 108562588

Start: 169980

End: 170456

Strand: Reverse

Name: 108562588

Synonym: HPAG1_0163

Alternate gene names: NA

Gene position: 170456-169980 (Counterclockwise)

Preceding gene: 108562589

Following gene: 108562587

Centisome position: 10.68

GC content: 38.16

Gene sequence:

>477_bases
ATGGCTGGTAGAATGGAATTGAAAAACATTATTTCAGAAACCCTTAATGAAATTGAAAAAATGGCTAAAACTATTGACAA
TAACTTTGATGCGGCACAAAAAACGCCCTCTTTTTTCAAAACGCCCCCCAATTTGCAAAACACCCCAAACCCTAAAAATG
CTAACACCCCTTTAGAGCCAAAAAACGCTGCTAAAATAGAAACGCAAGAAAAAATCACAGAAGAAAAAGAAGAAGAGACG
CCAGAAATCATTACAGAAGAAATCACGCCCAAAAACCCCACGCAAGCGCCAATTCCAAACGAGCGTGTTTTTTTAAAAAG
CTTATTAGAAAGAACCTTAGTGTTGTTTAAAGGCATGCAGGCTTTAGAAGAAAAAGAAGCCATGAAGCGTTTGGATTTAG
TGACGCGTTTCTTGCAATACCAATTGAGCGTGCTTGAAAAACGATTAGAATCTTTGGAGCGAGAAAACACAGAGTGA

Upstream 100 bases:

>100_bases
TCCAAAAAAATTGCACTCCTTTCAAACACGATGCATTGTTAGAGCGGCATTATTTAAATTTTATCAAAGGGGATCGTTTG
AGCGTTGAGAATTTAGAAAA

Downstream 100 bases:

>100_bases
AAAATGATCAAAGGAATTGTTTAAAAACAAAAAATAAGGCTTTATTTTTCAATATTCCATGAAAACAAAGCCTTAAATCC
CATTAATAACTATGATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAGRMELKNIISETLNEIEKMAKTIDNNFDAAQKTPSFFKTPPNLQNTPNPKNANTPLEPKNAAKIETQEKITEEKEEET
PEIITEEITPKNPTQAPIPNERVFLKSLLERTLVLFKGMQALEEKEAMKRLDLVTRFLQYQLSVLEKRLESLERENTE

Sequences:

>Translated_158_residues
MAGRMELKNIISETLNEIEKMAKTIDNNFDAAQKTPSFFKTPPNLQNTPNPKNANTPLEPKNAAKIETQEKITEEKEEET
PEIITEEITPKNPTQAPIPNERVFLKSLLERTLVLFKGMQALEEKEAMKRLDLVTRFLQYQLSVLEKRLESLERENTE
>Mature_157_residues
AGRMELKNIISETLNEIEKMAKTIDNNFDAAQKTPSFFKTPPNLQNTPNPKNANTPLEPKNAAKIETQEKITEEKEEETP
EIITEEITPKNPTQAPIPNERVFLKSLLERTLVLFKGMQALEEKEAMKRLDLVTRFLQYQLSVLEKRLESLERENTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18212; Mature: 18081

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRMELKNIISETLNEIEKMAKTIDNNFDAAQKTPSFFKTPPNLQNTPNPKNANTPLEP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCC
KNAAKIETQEKITEEKEEETPEIITEEITPKNPTQAPIPNERVFLKSLLERTLVLFKGMQ
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALEEKEAMKRLDLVTRFLQYQLSVLEKRLESLERENTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGRMELKNIISETLNEIEKMAKTIDNNFDAAQKTPSFFKTPPNLQNTPNPKNANTPLEP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCCC
KNAAKIETQEKITEEKEEETPEIITEEITPKNPTQAPIPNERVFLKSLLERTLVLFKGMQ
CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALEEKEAMKRLDLVTRFLQYQLSVLEKRLESLERENTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA