Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562578

Identifier: 108562578

GI number: 108562578

Start: 160909

End: 161184

Strand: Direct

Name: 108562578

Synonym: HPAG1_0153

Alternate gene names: NA

Gene position: 160909-161184 (Clockwise)

Preceding gene: 108562577

Following gene: 108562579

Centisome position: 10.08

GC content: 38.41

Gene sequence:

>276_bases
ATGGCTAGTGGCCTTTTTGAAAACGATGGAATCAAAGAAAACAAAGTGCGAGATTTTTTCTATAGCCATAGCTCCCTTAT
TGTCTTTTTCCTCTTACTGCTTGGGTTTGGGTATTATTTAGGGAAGTTGCTTTTTGGGGGCTCTTCTTTAGAAGTTTATT
TGGATTTAAGAGACAAGCATGAACGATTGCAACAAGAAATCACCGAATTGCAAAGCAAGAATGTGCGTTTGCAAAAGCGT
TTGTTTGAGTTGAAGGAATTACGGCCTAGAGATTAG

Upstream 100 bases:

>100_bases
TCCACCGCAAGGAGTGAAAGGATCGCTAAATACAACCGCCTTTTAGAGATTGAGCATGAATTAAAAGGGGGGATTTATAT
CGGTAAAGAGTTGTTTAAGC

Downstream 100 bases:

>100_bases
ATTTAAGGAAAATGGTAGTGTTAAAAAAGATGATAGGTTTGGTGGTGGTTTTAAGCGTTTTATGGGCTAGAGACAACCCT
TTTGAGTCTGAAATCAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKHERLQQEITELQSKNVRLQKR
LFELKELRPRD

Sequences:

>Translated_91_residues
MASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKHERLQQEITELQSKNVRLQKR
LFELKELRPRD
>Mature_90_residues
ASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKHERLQQEITELQSKNVRLQKRL
FELKELRPRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10759; Mature: 10627

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH
ERLQQEITELQSKNVRLQKRLFELKELRPRD
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASGLFENDGIKENKVRDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHH
ERLQQEITELQSKNVRLQKRLFELKELRPRD
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA