| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is lldP [H]
Identifier: 108562563
GI number: 108562563
Start: 145999
End: 147648
Strand: Direct
Name: lldP [H]
Synonym: HPAG1_0138
Alternate gene names: 108562563
Gene position: 145999-147648 (Clockwise)
Preceding gene: 108562558
Following gene: 108562564
Centisome position: 9.15
GC content: 43.7
Gene sequence:
>1650_bases ATGGAATTTTATCAAGTCTATGACCCATTAGGCCATATTTGGCTGAGTGCTTTAGTCGCACTTTCGCCTATTGCGCTCTT TTTTGTCTCTCTTATTGTCTTTAAACTTAAAGGGTATAGTGCTGGGTTTTTAAGCTTATTGCTTTCAATCCTTATTGCGT TATTTGTGTATAAAATGCCCGCTCAAATGGTGAGCGCGAGTTTTTTCTATGGCTTTCTTTATGGCTTGTGGCCGATCGCA TGGATTGTGATCGCTGCGATTTTTCTTTACAACCTTTCAGTGAAATCCGGGTATTTTGAGATTTTAAAAGAAAGCATTTT GAGTTTGACTCCGGATCACCGGATTTTAGTGATTTTGATTGGCTTTTGTTTTGGCTCGTTTTTAGAAGGAGCGATTGGTT TTGGAGGCCCGGTAGCGATCACAGCGGCGATTTTAGTCGGCCTTGGGCTAAACCCCTTATACGCTGCCGGATTGTGCCTG ATCGCTAACACCGCTCCTGTAGCTTTTGGCGCGGTGGGCATTCCTATTACGGCGATGGCTAGCGTGGTGGGTATTCCTGA ATTAGAGATTTCTCAAATGGTGGGCAGGGTGTTACCCATTTTTTCCATTGGTATTCCTTTTTTCATCGTGTTTTTAATGG ATGGTTTTAAAGGGATTAGAGAGACTTTTCCTGCAGTGGCTGTTACCGGGTTTAGTTTCGCTATCGCGCAATTTTTAAGC TCTAATTATCTAGGGCCGCAGCTTCCGGATATTATTTCAGCTTTAGTGTCATTGATTGCTACCACTTTGTTTTTAAAATT CTGGCAACCCAAGCGCATTTTCACCAGCAATGGCAAAGAGCCTACAATCAGCACAGAAAAACACCATATTTGCAAGGTGG TTGTGGCGTGGATGCCTTTTGTGTTGCTCACGATTACGATTATCATATGGACGCAACCCTGGTTTAAAGCGCTCTTTAAA GAAGGCGGGGCTTTGGCGTTTTCTAGCTTTGCGTTTGAATTTAATTCTATCAGTCAAAAGATTTTTAAAACCGTTCCCAT TGTTACTGAAGCGACCAATTTTCCCGTCGTGTTCAAACTCCCTTTGATTTTAACGACAGGCACTTCCATTTTTTTAGCCG CTCTTTTAAGCGTGTTTTTGTTGCGCGTGAAAATCAGCGATGCGATAGGGGTGTTTGGGGCCACTTTAAAAGAAATGCGT TTGCCGATTTTAACCATTGGCGTGGTTTTAGCGTTCGCGTATGTGGCTAATTATAGCGGCATGAGCGCCACGCTCGCTTT AGCGTTAGCGGATACTGGGCATGTTTTCACTTTCTTTTCGCCTGTTGTAGGCTGGCTTGGGGTGTTTTTAACCGGGAGCG ATACAAGCTCTAATCTTTTATTTGGCTCTTTGCAAATGCTCATCGCTACACAGCTTGGCTTGCCTGAAGTGCTTTTCTTA GCGGCCAACACTTCAGGGGGCGTTGTGGGTAAAATGATAAGCCCTCAAAGTATCGCTATCGCTTGCGCGGCGGTGGGGTT AGTGGGGAAAGAGAGCGAATTGTTCAGATTTACAGTAAAATACTCTATCGCTTTGGCAATCATTATGGGGATTGTCTTCA CTCTTATTGCTTATGTCTTCCCCTTTATTATCCCGGTTACTCCTACTTAA
Upstream 100 bases:
>100_bases ACAAACCCATTAAATTTGACTTAATATTAAATGCTACTTAAAATTAGTTTTTTCTTTTAAGTAAGATAAAAAAATACTTT TAATTATTCAAGGAAAATTT
Downstream 100 bases:
>100_bases TGGAGGGGGTTTAGGGGAGTAAGAGAATATTTTTTTAAAGGGATTTTTAGTGTCAGAATTTCATCAAGTCTATGACCCTT TGGGTAATATTTGGCTGAGC
Product: L-lactate permease
Products: Proton [Cytoplasm]; lactate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MEFYQVYDPLGHIWLSALVALSPIALFFVSLIVFKLKGYSAGFLSLLLSILIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPTISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT
Sequences:
>Translated_549_residues MEFYQVYDPLGHIWLSALVALSPIALFFVSLIVFKLKGYSAGFLSLLLSILIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPTISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT >Mature_549_residues MEFYQVYDPLGHIWLSALVALSPIALFFVSLIVFKLKGYSAGFLSLLLSILIALFVYKMPAQMVSASFFYGFLYGLWPIA WIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILIGFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCL IANTAPVAFGAVGIPITAMASVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPTISTEKHHICKVVVAWMPFVLLTITIIIWTQPWFKALFK EGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKLPLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMR LPILTIGVVLAFAYVANYSGMSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVFPFIIPVTPT
Specific function: Transports L-lactate across the membrane. Can also transport D-lactate and glycolate. Seems to be driven by a proton motive force [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1790031, Length=548, Percent_Identity=58.2116788321168, Blast_Score=608, Evalue=1e-175, Organism=Escherichia coli, GI1789347, Length=553, Percent_Identity=55.5153707052441, Blast_Score=572, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 59172; Mature: 59172
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFYQVYDPLGHIWLSALVALSPIALFFVSLIVFKLKGYSAGFLSLLLSILIALFVYKMP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH GFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMA HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCHHHEECCCCHHHCCCCCCHHHHH SVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPTISTEKHHICKVVVAWMPF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VLLTITIIIWTQPWFKALFKEGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKL HHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE PLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSG EEHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC MSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL CHHHEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVF EECCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH PFIIPVTPT HHHCCCCCC >Mature Secondary Structure MEFYQVYDPLGHIWLSALVALSPIALFFVSLIVFKLKGYSAGFLSLLLSILIALFVYKMP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AQMVSASFFYGFLYGLWPIAWIVIAAIFLYNLSVKSGYFEILKESILSLTPDHRILVILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH GFCFGSFLEGAIGFGGPVAITAAILVGLGLNPLYAAGLCLIANTAPVAFGAVGIPITAMA HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHCCHHHEECCCCHHHCCCCCCHHHHH SVVGIPELEISQMVGRVLPIFSIGIPFFIVFLMDGFKGIRETFPAVAVTGFSFAIAQFLS HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SNYLGPQLPDIISALVSLIATTLFLKFWQPKRIFTSNGKEPTISTEKHHICKVVVAWMPF CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHH VLLTITIIIWTQPWFKALFKEGGALAFSSFAFEFNSISQKIFKTVPIVTEATNFPVVFKL HHHHHHHHHHCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEE PLILTTGTSIFLAALLSVFLLRVKISDAIGVFGATLKEMRLPILTIGVVLAFAYVANYSG EEHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC MSATLALALADTGHVFTFFSPVVGWLGVFLTGSDTSSNLLFGSLQMLIATQLGLPEVLFL CHHHEEEEEECCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEE AANTSGGVVGKMISPQSIAIACAAVGLVGKESELFRFTVKYSIALAIIMGIVFTLIAYVF EECCCCCEEECCCCCHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHH PFIIPVTPT HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; lactate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]