| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is lldP [H]
Identifier: 108562564
GI number: 108562564
Start: 147698
End: 149353
Strand: Direct
Name: lldP [H]
Synonym: HPAG1_0139
Alternate gene names: 108562564
Gene position: 147698-149353 (Clockwise)
Preceding gene: 108562563
Following gene: 108562567
Centisome position: 9.25
GC content: 42.51
Gene sequence:
>1656_bases GTGTCAGAATTTCATCAAGTCTATGACCCTTTGGGTAATATTTGGCTGAGCGCTCTTGTAGCCTTATTGCCGATTTTGTT ATTTTTCTTATCCTTAATGGTTTTCAAGCTCAAAGGTTATGCGGCGGCCTTTTTGAGCGTGGCTCTGTCAGTCATTATTG CGGTTTTAGTGTATAAAATGCCTGTTAGCATGGTGGGTTCAAGCTTTCTTTATGGCTTTCTTTATGGCTTATGGCCGATC GCATGGATTATTATTGCGGCGATTTTTTTATACAAACTCAGCGTTAAATCCGGCTATTTTGAAATTTTAAAAGAAAGCGT CCAATCCATCACTTTAGATCACCGGATTTTAGTGATTTTGATTGGCTTTTGTTTTGGCTCGTTTTTAGAAGGAGCGATCG GGTTTGGAGGGCCTATTGCCATTACAGCAGCGATTTTAGTGGGCTTAGGGTTAAGCCCCTTATATTCTGCCGGATTGTGC CTAATCGCTAATACCGCTCCTGTGGCTTTTGGCGCAGTGGGTATCCCTATAAGCGCTATGGCGAGCGCGGTAGGGGTTCC AGCGATTTTAATTTCAGCCATGACGGGTAAAATCCTCTTTTTTGTGAGCTTGTTAGTGCCGTTTTTCATTGTGTTTTTGA TGGATGGCTTTAAGGGGATTAAAGAAACTTTTCCGGCCGTTTTTATCGCGGCTTTTTCTTTCGCTATCGCGCAATTTTTA AGCTCTAATTATTTAGGGCCAGAATTGCCTGGTATTATTTCAGCCCTTGTTTCACTCGTTGCAACAGCGCTCTTTTTGAA ATTTTGGCAGCCTAAAGCGATTTTTAGAAGCGACGGCAAAGCGGCCTCATTCACTAAGAGTAACCATCATATCTGTAAAA TTTATGTCGCTTGGTCTCCTTTTGTGATTTTGGTTTTAGTGATTGTTTTATGGATACAGCCTTTTTTTAAGGCTTTATTT GAAAAAGACGGCTTATTAGCTTTTTCTAATTTTTATTTTGAATTCAATAACATCAGCAACCACATCTTTAAAAGCCCGCC TTTTGTAGAAGCCAATCAAAGCGTGAGTTTTCCGGTGGTGTTTAAATTTCTCTTAATCAACACGGTTGGTACTTCCATTT TTTTGGCCGCTCTTGTTAGCATGCTCGTTTTAAGGGTGCGAGTGAGCGATGCGCTGAGCGTTTTTGGCGAAACCTTGAAA GAAATGCGCTATCCCATTCTTACTATTGGTTTAGTCTTAAGCTTTGCCTATGTGTCTAATTACAGCGGGATTTCTTCCAC TCTAGCCTTAGCGCTCACGCATACGGGTTTGGCTTTTACTTTTTTCTCGCCCTTGATCGGGTGGGTAGGCGTGTTTTTAA CCGGAAGCGATACGAGCTCTAATCTTTTATTTGGCTCTTTACAGCAACTCACCGCCCAACGATTGCACCTCCCTGAGGTT TTAACCCTAACGGCTAATACCGTGGGTGGTACTTTGGGCAAAATGATAAGCCCTCAAAGCATCGCTATCGCTTGCGCAGC GGTGGGATTAGCCGGGAAAGAGAGCGATTTGTTCAAATTCACGGTTAAATACTCCCTTATTTTTGTAGCGATCATGGGAG TTGTGATTAGCGCGATTGCGTATTTGATCCCTGAAGTGGTGCCTGCGATAAAGTAG
Upstream 100 bases:
>100_bases ACTCTTATTGCTTATGTCTTCCCCTTTATTATCCCGGTTACTCCTACTTAATGGAGGGGGTTTAGGGGAGTAAGAGAATA TTTTTTTAAAGGGATTTTTA
Downstream 100 bases:
>100_bases AGCCATTTTAGATTTGGCAGGGTTTAACCCCCAAATAAATTTTTTTGTTTTAAAAAATGCAAGATTTTAAGCGTCATAGA GCTTATGGGTAAGGTCTCTA
Product: L-lactate permease
Products: Proton [Cytoplasm]; lactate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 551; Mature: 550
Protein sequence:
>551_residues MSEFHQVYDPLGNIWLSALVALLPILLFFLSLMVFKLKGYAAAFLSVALSVIIAVLVYKMPVSMVGSSFLYGFLYGLWPI AWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVILIGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLC LIANTAPVAFGAVGIPISAMASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAIAQFL SSNYLGPELPGIISALVSLVATALFLKFWQPKAIFRSDGKAASFTKSNHHICKIYVAWSPFVILVLVIVLWIQPFFKALF EKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVSFPVVFKFLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLK EMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEV LTLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMGVVISAIAYLIPEVVPAIK
Sequences:
>Translated_551_residues MSEFHQVYDPLGNIWLSALVALLPILLFFLSLMVFKLKGYAAAFLSVALSVIIAVLVYKMPVSMVGSSFLYGFLYGLWPI AWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVILIGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLC LIANTAPVAFGAVGIPISAMASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAIAQFL SSNYLGPELPGIISALVSLVATALFLKFWQPKAIFRSDGKAASFTKSNHHICKIYVAWSPFVILVLVIVLWIQPFFKALF EKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVSFPVVFKFLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLK EMRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEV LTLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMGVVISAIAYLIPEVVPAIK >Mature_550_residues SEFHQVYDPLGNIWLSALVALLPILLFFLSLMVFKLKGYAAAFLSVALSVIIAVLVYKMPVSMVGSSFLYGFLYGLWPIA WIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVILIGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLCL IANTAPVAFGAVGIPISAMASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAIAQFLS SNYLGPELPGIISALVSLVATALFLKFWQPKAIFRSDGKAASFTKSNHHICKIYVAWSPFVILVLVIVLWIQPFFKALFE KDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVSFPVVFKFLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLKE MRYPILTIGLVLSFAYVSNYSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEVL TLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMGVVISAIAYLIPEVVPAIK
Specific function: Transports L-lactate across the membrane. Can also transport D-lactate and glycolate. Seems to be driven by a proton motive force [H]
COG id: COG1620
COG function: function code C; L-lactate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lactate permease family [H]
Homologues:
Organism=Escherichia coli, GI1790031, Length=553, Percent_Identity=54.9728752260398, Blast_Score=577, Evalue=1e-165, Organism=Escherichia coli, GI1789347, Length=555, Percent_Identity=51.5315315315315, Blast_Score=546, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003804 [H]
Pfam domain/function: PF02652 Lactate_perm [H]
EC number: NA
Molecular weight: Translated: 59437; Mature: 59306
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFHQVYDPLGNIWLSALVALLPILLFFLSLMVFKLKGYAAAFLSVALSVIIAVLVYKM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVSMVGSSFLYGFLYGLWPIAWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLCLIANTAPVAFGAVGIPISAM HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCHHHCCCCCCHHHH ASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAIAQFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSNYLGPELPGIISALVSLVATALFLKFWQPKAIFRSDGKAASFTKSNHHICKIYVAWSP HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEECCCCCEEEEEECHHH FVILVLVIVLWIQPFFKALFEKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVSFPVV HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHEEEECCCCHHHCCCCCCCCCCCCCCHHHH FKFLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLKEMRYPILTIGLVLSFAYVSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC YSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHH LTLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMGVVISAIA HEEECHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YLIPEVVPAIK HHHHHHHHCCC >Mature Secondary Structure SEFHQVYDPLGNIWLSALVALLPILLFFLSLMVFKLKGYAAAFLSVALSVIIAVLVYKM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVSMVGSSFLYGFLYGLWPIAWIIIAAIFLYKLSVKSGYFEILKESVQSITLDHRILVIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH IGFCFGSFLEGAIGFGGPIAITAAILVGLGLSPLYSAGLCLIANTAPVAFGAVGIPISAM HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCHHHCCCCCCHHHH ASAVGVPAILISAMTGKILFFVSLLVPFFIVFLMDGFKGIKETFPAVFIAAFSFAIAQFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSNYLGPELPGIISALVSLVATALFLKFWQPKAIFRSDGKAASFTKSNHHICKIYVAWSP HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEECCCCCEEEEEECHHH FVILVLVIVLWIQPFFKALFEKDGLLAFSNFYFEFNNISNHIFKSPPFVEANQSVSFPVV HHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHEEEECCCCHHHCCCCCCCCCCCCCCHHHH FKFLLINTVGTSIFLAALVSMLVLRVRVSDALSVFGETLKEMRYPILTIGLVLSFAYVSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC YSGISSTLALALTHTGLAFTFFSPLIGWVGVFLTGSDTSSNLLFGSLQQLTAQRLHLPEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCHH LTLTANTVGGTLGKMISPQSIAIACAAVGLAGKESDLFKFTVKYSLIFVAIMGVVISAIA HEEECHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YLIPEVVPAIK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; lactate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + lactate [Periplasm] = Proton [Cytoplasm] + lactate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]