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The map label for this gene is 108562517

Identifier: 108562517

GI number: 108562517

Start: 94738

End: 95736

Strand: Direct

Name: 108562517

Synonym: HPAG1_0092

Alternate gene names: NA

Gene position: 94738-95736 (Clockwise)

Preceding gene: 108562507

Following gene: 108562518

Centisome position: 5.93

GC content: 36.64

Gene sequence:

>999_bases
ATGACTGACAAAGAAATAGGTAAAAAAGTTTTAGAACAAGCAGGGAAGCCTTTGAGCGTTAAAGAAATTTTTGAGAGAGC
TTGTGAAATGGGATTGGATAAAGAATGCAAGGACGGAAAAATACTTCCTCATAGTCTTGGAAGTCAGCTTGGTGAGCACG
ATATTTCTAACGATAAGAAGCAATTTTATGTCGCACGCAAACAAGGAAAAGCCCATTTTTATTGGCTCAAATCTCGTGAA
AGAGAATTTCCTCCACAAGAAACCCCAGATTCCAAAGAAGAAGATGATGAACACAGCGAGTGTTCAGGCACAGCCAAAAA
ACAAAAAACCTCTTTTAACGAAAGGGATTTACACCCACTGCTTGTGAAATTCCTTAATGAAGATCCAAATTTCAAGCTCC
TATGCAAAACCATCTACCATGAAAATTGTAAAAAAAGTAAAGGGGGCGAATGCAAGTGGAATTATCCTGACATCGTGGGC
GTGTATTTTCCCTACAATAAATATTTTCCCTACAATAAATATCAACAAGAAACTTTGAAATTTTTACACCATACCGGTCA
AAAAAGACACAAGCTTTTTTCTTTTGAGCTTAAAAAAGAGCTTAGTTTTTCCAATTTGAAAGAAAGTTATTTTCAAGCAG
TGAGCAATTCTACTTGGGCTAATGAGGGGTATTTGGTGGTTTTTGAAGAGATTGAAGATAAAGTTTTGGGCGAATTAAGG
CGGCTCAACCAAAGCTTTGGCATAGGGGTTATCAAGCTAGAATCTGAGATTTCAAACTCCAAAATCTTGTTGCTAGCTAG
GGAAAGGGAGATTGATATACCCACACTTAACATGCTTATAGAACAAAGTCCGGAGGATTTTAAGCCTTTTATGGAAGAAA
TTAACAAGCAAATTGAAAAAGGGCTTGATACGCCAATCGAGATGGAGGGTTTTGATAAAGTGCTTAATGATGAAGCAATG
CAAAAACACATTAAAAATAAAGGCATTAACGCAGAATAA

Upstream 100 bases:

>100_bases
GGGTGAAGAGAGACACCCAGCCTAAACCTTATAAGGGTTGCGGTATTTTCAAACATTTTGAGTATAATCGTTTCCACTAC
AATCATAAAAAAGAAAGAAC

Downstream 100 bases:

>100_bases
AAAATGGGAGCGTCTTATCTTTCTTGTCCCATTTTTAAAAGCCAAGACCAGCTTTTCACCCTTTATCAAGGGGATTGCAA
TGAGGTTTTGCCCCAATTTG

Product: HrgA protein

Products: NA

Alternate protein names: Excinuclease ATPase Subunit

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTDKEIGKKVLEQAGKPLSVKEIFERACEMGLDKECKDGKILPHSLGSQLGEHDISNDKKQFYVARKQGKAHFYWLKSRE
REFPPQETPDSKEEDDEHSECSGTAKKQKTSFNERDLHPLLVKFLNEDPNFKLLCKTIYHENCKKSKGGECKWNYPDIVG
VYFPYNKYFPYNKYQQETLKFLHHTGQKRHKLFSFELKKELSFSNLKESYFQAVSNSTWANEGYLVVFEEIEDKVLGELR
RLNQSFGIGVIKLESEISNSKILLLAREREIDIPTLNMLIEQSPEDFKPFMEEINKQIEKGLDTPIEMEGFDKVLNDEAM
QKHIKNKGINAE

Sequences:

>Translated_332_residues
MTDKEIGKKVLEQAGKPLSVKEIFERACEMGLDKECKDGKILPHSLGSQLGEHDISNDKKQFYVARKQGKAHFYWLKSRE
REFPPQETPDSKEEDDEHSECSGTAKKQKTSFNERDLHPLLVKFLNEDPNFKLLCKTIYHENCKKSKGGECKWNYPDIVG
VYFPYNKYFPYNKYQQETLKFLHHTGQKRHKLFSFELKKELSFSNLKESYFQAVSNSTWANEGYLVVFEEIEDKVLGELR
RLNQSFGIGVIKLESEISNSKILLLAREREIDIPTLNMLIEQSPEDFKPFMEEINKQIEKGLDTPIEMEGFDKVLNDEAM
QKHIKNKGINAE
>Mature_331_residues
TDKEIGKKVLEQAGKPLSVKEIFERACEMGLDKECKDGKILPHSLGSQLGEHDISNDKKQFYVARKQGKAHFYWLKSRER
EFPPQETPDSKEEDDEHSECSGTAKKQKTSFNERDLHPLLVKFLNEDPNFKLLCKTIYHENCKKSKGGECKWNYPDIVGV
YFPYNKYFPYNKYQQETLKFLHHTGQKRHKLFSFELKKELSFSNLKESYFQAVSNSTWANEGYLVVFEEIEDKVLGELRR
LNQSFGIGVIKLESEISNSKILLLAREREIDIPTLNMLIEQSPEDFKPFMEEINKQIEKGLDTPIEMEGFDKVLNDEAMQ
KHIKNKGINAE

Specific function: Unknown

COG id: COG2958

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38701; Mature: 38570

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKEIGKKVLEQAGKPLSVKEIFERACEMGLDKECKDGKILPHSLGSQLGEHDISNDKK
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH
QFYVARKQGKAHFYWLKSREREFPPQETPDSKEEDDEHSECSGTAKKQKTSFNERDLHPL
HEEEHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCHHHH
LVKFLNEDPNFKLLCKTIYHENCKKSKGGECKWNYPDIVGVYFPYNKYFPYNKYQQETLK
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHH
FLHHTGQKRHKLFSFELKKELSFSNLKESYFQAVSNSTWANEGYLVVFEEIEDKVLGELR
HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHH
RLNQSFGIGVIKLESEISNSKILLLAREREIDIPTLNMLIEQSPEDFKPFMEEINKQIEK
HHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLDTPIEMEGFDKVLNDEAMQKHIKNKGINAE
CCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TDKEIGKKVLEQAGKPLSVKEIFERACEMGLDKECKDGKILPHSLGSQLGEHDISNDKK
CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH
QFYVARKQGKAHFYWLKSREREFPPQETPDSKEEDDEHSECSGTAKKQKTSFNERDLHPL
HEEEHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCHHHH
LVKFLNEDPNFKLLCKTIYHENCKKSKGGECKWNYPDIVGVYFPYNKYFPYNKYQQETLK
HHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHH
FLHHTGQKRHKLFSFELKKELSFSNLKESYFQAVSNSTWANEGYLVVFEEIEDKVLGELR
HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHH
RLNQSFGIGVIKLESEISNSKILLLAREREIDIPTLNMLIEQSPEDFKPFMEEINKQIEK
HHHHHHCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
GLDTPIEMEGFDKVLNDEAMQKHIKNKGINAE
CCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA