Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108562507

Identifier: 108562507

GI number: 108562507

Start: 83867

End: 83977

Strand: Direct

Name: 108562507

Synonym: HPAG1_0082

Alternate gene names: NA

Gene position: 83867-83977 (Clockwise)

Preceding gene: 108562506

Following gene: 108562517

Centisome position: 5.25

GC content: 36.04

Gene sequence:

>111_bases
ATGCAGACTTTAAAGAACAAAGCCTTTCGTGTTAGCATTCAATGGAATGTTTTAGTTAGAAAGCCCCTTGCTTTAGAAAG
GGGCGGTTTCACACTAAAACAATTCTTTTAA

Upstream 100 bases:

>100_bases
CGTCCTTTAGGGTGCAAGATGTGAGTGCATAGCTGTTAGACTATATTCAAGCTTAAAAGATGACAAAATACCTCTAGTCT
TTTTGGGGTAGGAAATATCC

Downstream 100 bases:

>100_bases
GGTAATAGGGGGATACTTTGGCGATGAATACCCCTTTTAAAGAGCCTTTTATATTAGCGTTCGTTAGGGCGAAAGCCCCT
TGCTTTAGAAAAAGGGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 36

Protein sequence:

>36_residues
MQTLKNKAFRVSIQWNVLVRKPLALERGGFTLKQFF

Sequences:

>Translated_36_residues
MQTLKNKAFRVSIQWNVLVRKPLALERGGFTLKQFF
>Mature_36_residues
MQTLKNKAFRVSIQWNVLVRKPLALERGGFTLKQFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4266; Mature: 4266

Theoretical pI: Translated: 12.28; Mature: 12.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTLKNKAFRVSIQWNVLVRKPLALERGGFTLKQFF
CCCCCCCEEEEEEEEEEEEECCEEECCCCEEEEECC
>Mature Secondary Structure
MQTLKNKAFRVSIQWNVLVRKPLALERGGFTLKQFF
CCCCCCCEEEEEEEEEEEEECCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA