Click here to switch to the map view.

The map label for this gene is 108562490

Identifier: 108562490

GI number: 108562490

Start: 66785

End: 67138

Strand: Direct

Name: 108562490

Synonym: HPAG1_0065

Alternate gene names: NA

Gene position: 66785-67138 (Clockwise)

Preceding gene: 108562489

Following gene: 108562491

Centisome position: 4.18

GC content: 35.59

Gene sequence:

>354_bases
ATGCTTTCTCATGAAGTTTATTTGGAGGGTTGCACCAATAAATTAAGAAAGATTTGCGATGATTTTGCAGAAAACGCCAT
GCAAGATGATTTAGGGCAGAAACTTAAAAGTGAGGCGCTAGAGGAGATGCTAAAAATCGCGCATGACTTAGAAAATTTAG
AGCAAGACACTCAATACCAAAGAAGAAAAATCAACGAGCAAATTGAAGAAGCCAAGTCTTTGGAGGGGCGAATTGATATG
AATTTCCATTCATCAAGCGAAATTGATAAGCTTATGCGTGAAGCCAAAGAGCATGAAAGAGAAGCTAGTAAAAGATATGA
TGAATATTTAAAATCTAAGGATAAAAATGATTGA

Upstream 100 bases:

>100_bases
ACTACTGATGTGGTGCTGTTTTTAGACACTGATGATGGCTCAAAACATGCACTATTAAATCTTAATATGTTTTTAAAAAA
ATTGGAATCAAGGGGTTAAA

Downstream 100 bases:

>100_bases
TGTGAATGGTTTATTAAAAGAACTGGACGATGCCTTAGATAAAGTTGTCCCTAAAAAAGAGCCAGAGAGTTTTCTCAAGC
CGATCATTTCACCAATAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLSHEVYLEGCTNKLRKICDDFAENAMQDDLGQKLKSEALEEMLKIAHDLENLEQDTQYQRRKINEQIEEAKSLEGRIDM
NFHSSSEIDKLMREAKEHEREASKRYDEYLKSKDKND

Sequences:

>Translated_117_residues
MLSHEVYLEGCTNKLRKICDDFAENAMQDDLGQKLKSEALEEMLKIAHDLENLEQDTQYQRRKINEQIEEAKSLEGRIDM
NFHSSSEIDKLMREAKEHEREASKRYDEYLKSKDKND
>Mature_117_residues
MLSHEVYLEGCTNKLRKICDDFAENAMQDDLGQKLKSEALEEMLKIAHDLENLEQDTQYQRRKINEQIEEAKSLEGRIDM
NFHSSSEIDKLMREAKEHEREASKRYDEYLKSKDKND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13883; Mature: 13883

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSHEVYLEGCTNKLRKICDDFAENAMQDDLGQKLKSEALEEMLKIAHDLENLEQDTQYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRKINEQIEEAKSLEGRIDMNFHSSSEIDKLMREAKEHEREASKRYDEYLKSKDKND
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSHEVYLEGCTNKLRKICDDFAENAMQDDLGQKLKSEALEEMLKIAHDLENLEQDTQYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRKINEQIEEAKSLEGRIDMNFHSSSEIDKLMREAKEHEREASKRYDEYLKSKDKND
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA