Click here to switch to the map view.

The map label for this gene is 108562489

Identifier: 108562489

GI number: 108562489

Start: 66364

End: 66783

Strand: Direct

Name: 108562489

Synonym: HPAG1_0064

Alternate gene names: NA

Gene position: 66364-66783 (Clockwise)

Preceding gene: 108562488

Following gene: 108562490

Centisome position: 4.16

GC content: 38.1

Gene sequence:

>420_bases
ATGGAAACAATTCCTGCAAACTCAGAACTGAATTGGGAATTTGTAGAGCCGCTCAATGAAAAGGCGTTGAATGGGTTAGA
AGATCAACTAAAAACGGGATTGAGCGATGCGTTTAAGGACTTTATCAAACGATCAAACTATGGCTTTAGCCAATGGCGTT
CTTTTATGGTGGGCAATGAATCCTACACATTCAAGCATGTTTTGCACTTCAATTTAGAGAGCTTGTTTGTTGATTTCATG
CAGAGCTTGAAAGAATGGTTAGAGCCTGAAGAAATCGTCTTCGCTAATGACGGGTATGGGGGGTATTATCTTTTGAATAC
GACTACTGATGTGGTGCTGTTTTTAGACACTGATGATGGCTCAAAACATGCACTATTAAATCTTAATATGTTTTTAAAAA
AATTGGAATCAAGGGGTTAA

Upstream 100 bases:

>100_bases
AGGGGTATTTGTGGCATTTTGACGCGAATGTTTTAGGGAAATTGGCGTTGGTGAGAGAAGAGTTATTATTAAGCGTGAAG
CACACGAAAGGATACTTACT

Downstream 100 bases:

>100_bases
AATGCTTTCTCATGAAGTTTATTTGGAGGGTTGCACCAATAAATTAAGAAAGATTTGCGATGATTTTGCAGAAAACGCCA
TGCAAGATGATTTAGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
METIPANSELNWEFVEPLNEKALNGLEDQLKTGLSDAFKDFIKRSNYGFSQWRSFMVGNESYTFKHVLHFNLESLFVDFM
QSLKEWLEPEEIVFANDGYGGYYLLNTTTDVVLFLDTDDGSKHALLNLNMFLKKLESRG

Sequences:

>Translated_139_residues
METIPANSELNWEFVEPLNEKALNGLEDQLKTGLSDAFKDFIKRSNYGFSQWRSFMVGNESYTFKHVLHFNLESLFVDFM
QSLKEWLEPEEIVFANDGYGGYYLLNTTTDVVLFLDTDDGSKHALLNLNMFLKKLESRG
>Mature_139_residues
METIPANSELNWEFVEPLNEKALNGLEDQLKTGLSDAFKDFIKRSNYGFSQWRSFMVGNESYTFKHVLHFNLESLFVDFM
QSLKEWLEPEEIVFANDGYGGYYLLNTTTDVVLFLDTDDGSKHALLNLNMFLKKLESRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16106; Mature: 16106

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METIPANSELNWEFVEPLNEKALNGLEDQLKTGLSDAFKDFIKRSNYGFSQWRSFMVGNE
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCC
SYTFKHVLHFNLESLFVDFMQSLKEWLEPEEIVFANDGYGGYYLLNTTTDVVLFLDTDDG
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCC
SKHALLNLNMFLKKLESRG
CCEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
METIPANSELNWEFVEPLNEKALNGLEDQLKTGLSDAFKDFIKRSNYGFSQWRSFMVGNE
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCC
SYTFKHVLHFNLESLFVDFMQSLKEWLEPEEIVFANDGYGGYYLLNTTTDVVLFLDTDDG
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCC
SKHALLNLNMFLKKLESRG
CCEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA