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The map label for this gene is 108562475

Identifier: 108562475

GI number: 108562475

Start: 53219

End: 53443

Strand: Reverse

Name: 108562475

Synonym: HPAG1_0050

Alternate gene names: NA

Gene position: 53443-53219 (Counterclockwise)

Preceding gene: 108562476

Following gene: 108562474

Centisome position: 3.35

GC content: 28.44

Gene sequence:

>225_bases
GTGAATTATTGGACAAAGCTAAGCATAGAATACGCTAATCAACGCTCCTATTTGGATGACTTGTTTCAAGTATATCCTAC
AATTCCAGAAGGTTTGAGAGAAATTGATTTAAAGATTTGGTCTAATATTGAATACCATTTTAAACAAAAAGACAATTTAG
CCTTAATAACTGAATTGCTTAATTTAGATTTATTCCCTATTAAAGATAGTATATGGCTTATTTAA

Upstream 100 bases:

>100_bases
AATCAAAAACACTTCTTATCCTAAAATTGTTTTTAGAAATTTAAGCAATATTTTTGTTACAATCCATGCAGTGAAACTAT
TTTTCAAAAAGGTTAAATTG

Downstream 100 bases:

>100_bases
AACGGGATAAAAGTGCATTAGAACGCAATCCAAGAACAATCAATCGTATTTGTGGGAGATTGTATGAAATGGGGCTTAAT
AAAATTTTTGAAAAATGCAG

Product: type II restriction enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDLKIWSNIEYHFKQKDNLALITELLNLDLFPIKDSIWLI

Sequences:

>Translated_74_residues
MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDLKIWSNIEYHFKQKDNLALITELLNLDLFPIKDSIWLI
>Mature_74_residues
MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDLKIWSNIEYHFKQKDNLALITELLNLDLFPIKDSIWLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8964; Mature: 8964

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDLKIWSNIEYHFKQKDNLALITELL
CCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
NLDLFPIKDSIWLI
CCCCEECCCCEEEC
>Mature Secondary Structure
MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDLKIWSNIEYHFKQKDNLALITELL
CCCEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
NLDLFPIKDSIWLI
CCCCEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA