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The map label for this gene is 108562438

Identifier: 108562438

GI number: 108562438

Start: 12898

End: 13950

Strand: Direct

Name: 108562438

Synonym: HPAG1_0013

Alternate gene names: NA

Gene position: 12898-13950 (Clockwise)

Preceding gene: 108562437

Following gene: 108562439

Centisome position: 0.81

GC content: 41.22

Gene sequence:

>1053_bases
ATGAAAAAGATTAAAGCTTTAGCCCTATTTAGTGGGGGGTTGGATAGTTTGTTGTCTATGAAATTACTCATCGATCAAGG
CATTGAGGTAACCGCTTTGCACTTCAATATAGGGTTTGGAGGGAATAAAGATAAAAGAGAGTATTTTGAAAACGCCACCG
CACAAATCGGAGCTAAGCTCTTAGTGTGCGATATTAGAGAGCAGTTTTTTAACGATGTGTTGTTCAAGCCCAAATACGGC
TATGGGAAATATTTCAACCCTTGCATTGATTGCCATGCCAACATGTTTAGGAACGCTTTTTATAAAATGCTTGAATTGAA
CGCGGATTTTGTTTTGAGTGGGGAAGTGCTAGGGCAACGCCCTAAATCCCAAAGGAAAGAAGCGCTCAATCAGGTGAGAA
AATTAGTCAGAGAAGTGGGCGAAGAGGCGCGTTTTGATCCCGTTTTAGACCGGACGCAAGCAAGCGGTAAGAAACCGCAA
TTTTTAGATGAACTGCTCTTAAGGCCCATGAGCGCTAAACTCTTAGAGCCTACTTTCATGGAAAAAAAGGGTTTTGTTGA
TAGAGAAAAGCTTTTAGATGTGAGCGGTAGGGGGCGCACTAGGCAATTGCAAATGATCAAAGATTATGGCTTGAAATATT
ATGAAAAGCCAGGTGGGGGGTGCTTGCTTACGGACATTCAAGTGAGCAATAAGATTAAGAATTTGAAAGAATACAGAGAA
ATGGTGTTTGAAGACAGCGTGATTGTCAAAAACGGGCGTTATTTTGTCTTACCCCATAACGCTCGTTTGGTGGTGGCAAG
GAATGAAGAAGAAAACCATAAATTAGACATTCAGCACCCCTTAATGGATAAGATTGAATTACTAAGCTGTAAAGGCCCTT
TGAGTTTAGTGGATAAAAACGCCAGCAAAGAAGATAAAGAATTGGCCGGCCGTATCGCTTTAGGCTATGCTAAGACTTTA
AAAAATCAAGCTTACCTCATTCAAATAGGGGATGAAAAGCGCGAGCTTTACCCTTTGGATAAAGAGAGCGCTAGGGAATA
TTTGTTCGCTTGA

Upstream 100 bases:

>100_bases
AAATCCCTAAAAGTTCGCTTTCTTTTAGCGAAAAAATGATCTATTTAAAAAAGGCCCGCCAGGCCATTATGAAATTAAAA
CAAGGAGAATTAGTCGCCAT

Downstream 100 bases:

>100_bases
AAGGGAGTTTTTGAGAATTTTAGGGGTTTTCTTTTATGCTATAATGAAAAAAAGCTCTAATCATTAAGCTATTTGCTAGG
AGGTTTGCATGCAAGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Arginino Succinate Synthase; Thiamine Biosynthesis Protein-Like Protein; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase; tRNA Methyl Transferase-Like Protein; ThiI Family Protein

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKPKYG
YGKYFNPCIDCHANMFRNAFYKMLELNADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDPVLDRTQASGKKPQ
FLDELLLRPMSAKLLEPTFMEKKGFVDREKLLDVSGRGRTRQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
MVFEDSVIVKNGRYFVLPHNARLVVARNEEENHKLDIQHPLMDKIELLSCKGPLSLVDKNASKEDKELAGRIALGYAKTL
KNQAYLIQIGDEKRELYPLDKESAREYLFA

Sequences:

>Translated_350_residues
MKKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKPKYG
YGKYFNPCIDCHANMFRNAFYKMLELNADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDPVLDRTQASGKKPQ
FLDELLLRPMSAKLLEPTFMEKKGFVDREKLLDVSGRGRTRQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
MVFEDSVIVKNGRYFVLPHNARLVVARNEEENHKLDIQHPLMDKIELLSCKGPLSLVDKNASKEDKELAGRIALGYAKTL
KNQAYLIQIGDEKRELYPLDKESAREYLFA
>Mature_350_residues
MKKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKPKYG
YGKYFNPCIDCHANMFRNAFYKMLELNADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDPVLDRTQASGKKPQ
FLDELLLRPMSAKLLEPTFMEKKGFVDREKLLDVSGRGRTRQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
MVFEDSVIVKNGRYFVLPHNARLVVARNEEENHKLDIQHPLMDKIELLSCKGPLSLVDKNASKEDKELAGRIALGYAKTL
KNQAYLIQIGDEKRELYPLDKESAREYLFA

Specific function: Unknown

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40104; Mature: 40104

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKL
CCCHHEEHHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEE
LVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELNADFVLSGEVLGQR
EEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCC
PKSQRKEALNQVRKLVREVGEEARFDPVLDRTQASGKKPQFLDELLLRPMSAKLLEPTFM
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCHHH
EKKGFVDREKLLDVSGRGRTRQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
HHCCCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHH
MVFEDSVIVKNGRYFVLPHNARLVVARNEEENHKLDIQHPLMDKIELLSCKGPLSLVDKN
HHHCCCEEEECCEEEEEECCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCCCHHHHCCC
ASKEDKELAGRIALGYAKTLKNQAYLIQIGDEKRELYPLDKESAREYLFA
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MKKIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKL
CCCHHEEHHHHCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCEE
LVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELNADFVLSGEVLGQR
EEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCC
PKSQRKEALNQVRKLVREVGEEARFDPVLDRTQASGKKPQFLDELLLRPMSAKLLEPTFM
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCCHHH
EKKGFVDREKLLDVSGRGRTRQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYRE
HHCCCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHHH
MVFEDSVIVKNGRYFVLPHNARLVVARNEEENHKLDIQHPLMDKIELLSCKGPLSLVDKN
HHHCCCEEEECCEEEEEECCCEEEEEECCCCCCEEECCCHHHHHHHHHCCCCCHHHHCCC
ASKEDKELAGRIALGYAKTLKNQAYLIQIGDEKRELYPLDKESAREYLFA
CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA