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The map label for this gene is yaaW [C]

Identifier: 108562425

GI number: 108562425

Start: 513

End: 1274

Strand: Reverse

Name: yaaW [C]

Synonym: HPAG1_1536

Alternate gene names: 108562425

Gene position: 1274-513 (Counterclockwise)

Preceding gene: 108562426

Following gene: NA

Centisome position: 0.08

GC content: 39.37

Gene sequence:

>762_bases
ATGGCATACAAATATGATAGAGACTTGGAATTTTTAAAGCAACTGGAATCTAGTGATTTATTGGATTTGTTTGAGGTGCT
TGTTTTTGGTAAAGACGGCGAAAAAAGACACAATGAAAAACTGACCAGCTCCATAGAATACAAAAGGCATGGCGATGATT
ACGCTAAATACGCAGAAAGAATCGCTGAAGAGTTGCAATACTATGGGAGCAATAGTTTTGCGAGTTTCATTAAAGGCGAA
GGAGTCTTATACAAAGAGATCTTATGCGATGTGTGCGATAAATTAAAGGTCAATTACAACAAGAAAACTGAAACGACTTT
AATTGAACAGAACATGCTTTCTAAAATCTTAGAAAGAAGTTTGGAAGAAATGGATGATGAAGAAGTGAAAGAAATGTGCG
ATGAATTGTCCATAAAAAACACCGACAACTTAAACAGACAAGCCTTAAGCGCGGCGACTTTAACGCTGTTTAAAATGGGA
GGCTTTAAATCTTATCAATTAGCTGTCATTGTTGCGAATGCGGTCGCAAAAACCATTCTAGGGCGTGGTTTATCGCTTGC
GGGCAATCAGGTGCTTACAAGAACTCTGAGCTTTTTAACAGGTCCTGTTGGCTGGATCATTACAGGCGTATGGACAGCGA
TTGATATTGCAGGGCCGGCTTATAGGGTAACCATACCGGCATGCATTGTGGTTGCCACTTTACGCCTAAAAACACAGCAA
GCCAATGAAGATAAGAAGTCGTTGCAAATAGAATCCATTTAA

Upstream 100 bases:

>100_bases
ACAAATGATATTAAAATCAGTAACCACTTTAGAAAAACAGCGATGGAGTGCGAAAAGCCGTTTGTTTTTAATAAGTGATA
AAACAATATAAAGGAATAAT

Downstream 100 bases:

>100_bases
GCTTTTTTTAGGGAAAAAGGTATAGAATGGAGACCTAGATGCAGAAACGCATCTAGTTTTTATTTTAATTTAAGGGAGAC
AAAATGAGTAACAGTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MAYKYDRDLEFLKQLESSDLLDLFEVLVFGKDGEKRHNEKLTSSIEYKRHGDDYAKYAERIAEELQYYGSNSFASFIKGE
GVLYKEILCDVCDKLKVNYNKKTETTLIEQNMLSKILERSLEEMDDEEVKEMCDELSIKNTDNLNRQALSAATLTLFKMG
GFKSYQLAVIVANAVAKTILGRGLSLAGNQVLTRTLSFLTGPVGWIITGVWTAIDIAGPAYRVTIPACIVVATLRLKTQQ
ANEDKKSLQIESI

Sequences:

>Translated_253_residues
MAYKYDRDLEFLKQLESSDLLDLFEVLVFGKDGEKRHNEKLTSSIEYKRHGDDYAKYAERIAEELQYYGSNSFASFIKGE
GVLYKEILCDVCDKLKVNYNKKTETTLIEQNMLSKILERSLEEMDDEEVKEMCDELSIKNTDNLNRQALSAATLTLFKMG
GFKSYQLAVIVANAVAKTILGRGLSLAGNQVLTRTLSFLTGPVGWIITGVWTAIDIAGPAYRVTIPACIVVATLRLKTQQ
ANEDKKSLQIESI
>Mature_252_residues
AYKYDRDLEFLKQLESSDLLDLFEVLVFGKDGEKRHNEKLTSSIEYKRHGDDYAKYAERIAEELQYYGSNSFASFIKGEG
VLYKEILCDVCDKLKVNYNKKTETTLIEQNMLSKILERSLEEMDDEEVKEMCDELSIKNTDNLNRQALSAATLTLFKMGG
FKSYQLAVIVANAVAKTILGRGLSLAGNQVLTRTLSFLTGPVGWIITGVWTAIDIAGPAYRVTIPACIVVATLRLKTQQA
NEDKKSLQIESI

Specific function: Unknown

COG id: COG4735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0174 family [H]

Homologues:

Organism=Escherichia coli, GI1786193, Length=237, Percent_Identity=29.1139240506329, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021150 [H]

Pfam domain/function: PF03981 Ubiq_cyt_C_chap [H]

EC number: NA

Molecular weight: Translated: 28490; Mature: 28359

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKYDRDLEFLKQLESSDLLDLFEVLVFGKDGEKRHNEKLTSSIEYKRHGDDYAKYAER
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
IAEELQYYGSNSFASFIKGEGVLYKEILCDVCDKLKVNYNKKTETTLIEQNMLSKILERS
HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LEEMDDEEVKEMCDELSIKNTDNLNRQALSAATLTLFKMGGFKSYQLAVIVANAVAKTIL
HHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GRGLSLAGNQVLTRTLSFLTGPVGWIITGVWTAIDIAGPAYRVTIPACIVVATLRLKTQQ
HCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
ANEDKKSLQIESI
CCCHHHCEEECCC
>Mature Secondary Structure 
AYKYDRDLEFLKQLESSDLLDLFEVLVFGKDGEKRHNEKLTSSIEYKRHGDDYAKYAER
CCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
IAEELQYYGSNSFASFIKGEGVLYKEILCDVCDKLKVNYNKKTETTLIEQNMLSKILERS
HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LEEMDDEEVKEMCDELSIKNTDNLNRQALSAATLTLFKMGGFKSYQLAVIVANAVAKTIL
HHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GRGLSLAGNQVLTRTLSFLTGPVGWIITGVWTAIDIAGPAYRVTIPACIVVATLRLKTQQ
HCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHH
ANEDKKSLQIESI
CCCHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]