| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is pucI [H]
Identifier: 107023145
GI number: 107023145
Start: 1768910
End: 1770418
Strand: Reverse
Name: pucI [H]
Synonym: Bcen_1594
Alternate gene names: 107023145
Gene position: 1770418-1768910 (Counterclockwise)
Preceding gene: 107023146
Following gene: 107023144
Centisome position: 53.74
GC content: 66.93
Gene sequence:
>1509_bases ATGAAACCAGCAGCGATTCCCGCCGATCCCGACAGCGCCGCGGCGCACGGCGGCAGCCTGTACAACGACGACCTCGCGCC GACGACGCCGGCGCAGCGCACGTGGAAGTGGTACCACTTCGCGGCGCTGTGGGTCGGGATGGTGATGAACATCGCGTCGT ACATGCTCGCGGCCGGCTTGATCCAGGAAGGCATGTCGCCGTGGCAGGCGGTGATGACGGTGCTGCTCGGCAACCTGATC GTGCTCGTGCCGATGCTGTTGATCGGCCATGCAGGCGCGAAGCACGGGATTCCGTATGCGGTGCTCGTGCGCGCGTCGTT CGGTACGCAGGGCGCGAAGCTGCCCGCGCTGCTGCGCGCGATCGTCGCCTGCGGCTGGTACGGCATCCAGACCTGGCTCG GCGGCAGCGCGATCTACACGCTGCTGAACATCCTGACCGGCAACGCGCTGCACGGCGCGGCGCTGCCTGTCGTTGGCATC TCGTTCGGGCAACTCGCGTGCTTCCTCGTGTTCTGGGCGCTGCAGCTGTATTTCATCTGGCACGGCACCGATTCGATCCG CTGGCTCGAAAGCTGGTCTGCGCCGATCAAGGTCGTGATGTGCGTGGCGCTCGTGTGGTGGGCGACGTCGCAGGCGGGCG GTGTCGGCTCGATGCTGTCGGCGCCGTCGCAGTTCGCGGCGGGCGGCAAGAAGGCCGGACTCTTCTGGGCGACCTTCTGG CCGGGCCTGACCGCGATGGTCGGCTTCTGGGCGACGCTCGCGCTGAACATTCCCGATTTCACGCGCTTCGCGCATTCGCA GCGCGACCAGATGATCGGGCAGTCGATCGGGCTGCCGCTGCCGATGGCGCTGCTGTCGGTGGTGTCGGTCGTCGTGACGT CGGCGACCGTCGTGATCTACGGCAACGCGATCTGGGATCCGATCGACCTGACGAGCCGGATGACCGGCATCGGCGTGGGC ATCGCGCTCGTGATCCTCACGCTCGACACGATGTGCTGCAACCTCGCGGCGAACCTGGTCGGTCCCGCATACGATTTTTC GAGCCTGTGGCCGAAGGCGATCTCGTACCGCGCGGGCGGGATGATCACCGCGACGATCGCGATCGTGATGATGCCGTGGA AGATCCTCGCGACGACGGACGGCTACATCTTCACCTGGCTCGTCGGTTATTCGGCGCTGCTCGGGCCGGTCGCGGGCATC CTGATGGTCGACTATTTCCTGATTCGCGGCACGCAGCTCGACACACGCGCACTGTTCGACGAGCGCGGCGACTTCAGCTA TGCGCGCGGCTGGAACCCGGCCGCGCTGGTCGCGCTCGCGGTCGGCGTGCTGCCGAACCTGCCGGGCTTCCTGCATACGG CGTTTCCGGCGTCGTTCCCGAACGTGCCGGCGTTCTTCAACACGCTTTACACGTACGCGTGGTTCGTCGGCCTCGTGCTG GCGTCGGGCGTGTACGGCACCTGGATGAAGTGGCGCGCCGGACAGCGCGCGCAGATCGCGAGCGCATGA
Upstream 100 bases:
>100_bases CCGAGGTCCGGCGGTGCGGCATGGACCGCGCCGCCGCTTTTCGTTTCCCCGGGCCGGCATCGCACGATGCCGGCGCCGAC GTTTTCGTGGAGCGCGTTCA
Downstream 100 bases:
>100_bases CGCACGCGCGGGCCGGATGCGGCTCGCGCGCGGCATGCGGCACCGACAGTCAACGAGGAGGCAACGAAATGGCAATCCTG ATTCGTGGCGGCACCGTGGT
Product: NCS1 nucleoside transporter
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKPAAIPADPDSAAAHGGSLYNDDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGLIQEGMSPWQAVMTVLLGNLI VLVPMLLIGHAGAKHGIPYAVLVRASFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPVVGI SFGQLACFLVFWALQLYFIWHGTDSIRWLESWSAPIKVVMCVALVWWATSQAGGVGSMLSAPSQFAAGGKKAGLFWATFW PGLTAMVGFWATLALNIPDFTRFAHSQRDQMIGQSIGLPLPMALLSVVSVVVTSATVVIYGNAIWDPIDLTSRMTGIGVG IALVILTLDTMCCNLAANLVGPAYDFSSLWPKAISYRAGGMITATIAIVMMPWKILATTDGYIFTWLVGYSALLGPVAGI LMVDYFLIRGTQLDTRALFDERGDFSYARGWNPAALVALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL ASGVYGTWMKWRAGQRAQIASA
Sequences:
>Translated_502_residues MKPAAIPADPDSAAAHGGSLYNDDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGLIQEGMSPWQAVMTVLLGNLI VLVPMLLIGHAGAKHGIPYAVLVRASFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPVVGI SFGQLACFLVFWALQLYFIWHGTDSIRWLESWSAPIKVVMCVALVWWATSQAGGVGSMLSAPSQFAAGGKKAGLFWATFW PGLTAMVGFWATLALNIPDFTRFAHSQRDQMIGQSIGLPLPMALLSVVSVVVTSATVVIYGNAIWDPIDLTSRMTGIGVG IALVILTLDTMCCNLAANLVGPAYDFSSLWPKAISYRAGGMITATIAIVMMPWKILATTDGYIFTWLVGYSALLGPVAGI LMVDYFLIRGTQLDTRALFDERGDFSYARGWNPAALVALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL ASGVYGTWMKWRAGQRAQIASA >Mature_502_residues MKPAAIPADPDSAAAHGGSLYNDDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGLIQEGMSPWQAVMTVLLGNLI VLVPMLLIGHAGAKHGIPYAVLVRASFGTQGAKLPALLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPVVGI SFGQLACFLVFWALQLYFIWHGTDSIRWLESWSAPIKVVMCVALVWWATSQAGGVGSMLSAPSQFAAGGKKAGLFWATFW PGLTAMVGFWATLALNIPDFTRFAHSQRDQMIGQSIGLPLPMALLSVVSVVVTSATVVIYGNAIWDPIDLTSRMTGIGVG IALVILTLDTMCCNLAANLVGPAYDFSSLWPKAISYRAGGMITATIAIVMMPWKILATTDGYIFTWLVGYSALLGPVAGI LMVDYFLIRGTQLDTRALFDERGDFSYARGWNPAALVALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL ASGVYGTWMKWRAGQRAQIASA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=483, Percent_Identity=29.6066252587992, Blast_Score=206, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6319429, Length=481, Percent_Identity=27.6507276507277, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322219, Length=451, Percent_Identity=27.7161862527716, Blast_Score=187, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319495, Length=450, Percent_Identity=26.6666666666667, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6324645, Length=463, Percent_Identity=24.1900647948164, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6323266, Length=449, Percent_Identity=23.3853006681514, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324766, Length=465, Percent_Identity=22.7956989247312, Blast_Score=127, Evalue=4e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 53855; Mature: 53855
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAAIPADPDSAAAHGGSLYNDDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGL CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQEGMSPWQAVMTVLLGNLIVLVPMLLIGHAGAKHGIPYAVLVRASFGTQGAKLPALLRA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH IVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPVVGISFGQLACFLVFWALQLYFIW HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHE HGTDSIRWLESWSAPIKVVMCVALVWWATSQAGGVGSMLSAPSQFAAGGKKAGLFWATFW ECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCEEEEHHH PGLTAMVGFWATLALNIPDFTRFAHSQRDQMIGQSIGLPLPMALLSVVSVVVTSATVVIY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEE GNAIWDPIDLTSRMTGIGVGIALVILTLDTMCCNLAANLVGPAYDFSSLWPKAISYRAGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC MITATIAIVMMPWKILATTDGYIFTWLVGYSALLGPVAGILMVDYFLIRGTQLDTRALFD HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ERGDFSYARGWNPAALVALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ASGVYGTWMKWRAGQRAQIASA HCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKPAAIPADPDSAAAHGGSLYNDDLAPTTPAQRTWKWYHFAALWVGMVMNIASYMLAAGL CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQEGMSPWQAVMTVLLGNLIVLVPMLLIGHAGAKHGIPYAVLVRASFGTQGAKLPALLRA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHH IVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPVVGISFGQLACFLVFWALQLYFIW HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHE HGTDSIRWLESWSAPIKVVMCVALVWWATSQAGGVGSMLSAPSQFAAGGKKAGLFWATFW ECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHCCCCCCCEEEEHHH PGLTAMVGFWATLALNIPDFTRFAHSQRDQMIGQSIGLPLPMALLSVVSVVVTSATVVIY HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEEE GNAIWDPIDLTSRMTGIGVGIALVILTLDTMCCNLAANLVGPAYDFSSLWPKAISYRAGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC MITATIAIVMMPWKILATTDGYIFTWLVGYSALLGPVAGILMVDYFLIRGTQLDTRALFD HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ERGDFSYARGWNPAALVALAVGVLPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLVL CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH ASGVYGTWMKWRAGQRAQIASA HCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]