| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is dht [H]
Identifier: 107023144
GI number: 107023144
Start: 1767384
End: 1768841
Strand: Reverse
Name: dht [H]
Synonym: Bcen_1593
Alternate gene names: 107023144
Gene position: 1768841-1767384 (Counterclockwise)
Preceding gene: 107023145
Following gene: 107023143
Centisome position: 53.69
GC content: 68.24
Gene sequence:
>1458_bases ATGGCAATCCTGATTCGTGGCGGCACCGTGGTCGATGCGGACCGCTCCTATCGCGCGGACGTGCTCTGCGCGGACCCGCA GGACGGCGGCACGATCCTGCAGATTGCGGAGCAGATCGACGCGCCGGCCGGCGCAACCGTGGTCGACGCGCACGACCAGT ACGTGATGCCGGGCGGTATCGACCCGCACACGCACATGGAACTGCCGTTCATGGGTACCACCGCGAGCGACGATTTCTAC TCGGGCACCGCGGCCGGGCTGTCGGGCGGCACGACGAGCATCATCGACTTCGTGATTCCGAGCCCGAAGCAGCCGCTGAT GGATGCGTTCCGCGAATGGCGCGGCTGGGCCGAGAAGGCGGCTTCCGATTACGGTTTCCACGTGGCCGTGACGTGGTGGG ACGACAGCGTGCACCGCGACATGGGCACGCTCGTGCGCGAGCATGGCGTGTCGAGCTTCAAGCACTTCATGGCGTACAAG AACGCGATCATGGCCGACGACGAGGTGCTCGTGAACAGCTTCACGCGTTCGCTCGAACTCGGCGCGCTGCCGACCGTGCA CGCGGAAAACGGTGAGCTCGTGTTCCAGCTGCAAAAGGCGCTGCTCGCGCGCGGGATCACGGGGCCGGAGGCGCATCCGC TGTCGCGGCCGCCGGAGGTGGAAGGCGAGGCCGCGAACCGCGCGATCCGGATCGCGCAGGTACTCGGCGTGCCCGTGTAT ATCGTGCACGTGTCGGCGAAGGACGCGGTGGACGTGATCACCCGTGCGCGCAGCGAAGGGCTGCGTGTGTTCGGCGAAGT GCTGCCGGGCCACCTCGTGATCGACGAGGCCGTCTATCGCGATCCGGACTGGACGCGCGCGGCGGCCCACGTGATGAGCC CGCCGTTCCGCTCGGCCGAGCATCGCGAGGCGCTGTGGCGCGGGCTGCAGTCGGGCCAGCTGCATACGACCGCGACCGAT CACTGCGTATTCTGCGCGTCGCAGAAGGCGATGGGCCGCGAGGATTTCACGAAGATCCCGAACGGCTGCGGCGGTGTCGA GGATCGCATGTCGGTGCTGTGGCACCACGGCGTGAATCACGGCCGCATCACGCCGAACGAGTTCGTGCGGATCACGTCGA CCAATGCCGCACAGATCTTCAACCTGTATCCGCGCAAGGGCGCCGTGCAGGTTGGCGCCGATGCCGACCTCGTCGTGTGG GACCCGGCCGCGACGAAGACGATCTCGGTGAAGACCCATCACCAGCAGGTCGACTTCAACGTGTTCGAGGGGATGACGGT GCAGGGCGTCGCGACGCACACGCTCACGCGCGGCGCACTCGCATGGGCCGACGGCGAATTGCGCGCGGTGCGCGGCGCGG GCCGCTACCTCAAGCGCCCGCCGGGCGCGGGCTACTACGAGGCCGCGCGGATCGCGAACCGGCTGCGCGAGCCGCATCCG GTCGAACGCGCCGGTTGA
Upstream 100 bases:
>100_bases CCGGACAGCGCGCGCAGATCGCGAGCGCATGACGCACGCGCGGGCCGGATGCGGCTCGCGCGCGGCATGCGGCACCGACA GTCAACGAGGAGGCAACGAA
Downstream 100 bases:
>100_bases ACGACGCAGGTCATGCGGGGCGTGTCCGTTCGAACGGCGCGCCCCGCGCGCGTTTTCGCAGGGTAGATAGAACAACTGAT CAAGTCGTCGAGGCACGAAA
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MAILIRGGTVVDADRSYRADVLCADPQDGGTILQIAEQIDAPAGATVVDAHDQYVMPGGIDPHTHMELPFMGTTASDDFY SGTAAGLSGGTTSIIDFVIPSPKQPLMDAFREWRGWAEKAASDYGFHVAVTWWDDSVHRDMGTLVREHGVSSFKHFMAYK NAIMADDEVLVNSFTRSLELGALPTVHAENGELVFQLQKALLARGITGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY IVHVSAKDAVDVITRARSEGLRVFGEVLPGHLVIDEAVYRDPDWTRAAAHVMSPPFRSAEHREALWRGLQSGQLHTTATD HCVFCASQKAMGREDFTKIPNGCGGVEDRMSVLWHHGVNHGRITPNEFVRITSTNAAQIFNLYPRKGAVQVGADADLVVW DPAATKTISVKTHHQQVDFNVFEGMTVQGVATHTLTRGALAWADGELRAVRGAGRYLKRPPGAGYYEAARIANRLREPHP VERAG
Sequences:
>Translated_485_residues MAILIRGGTVVDADRSYRADVLCADPQDGGTILQIAEQIDAPAGATVVDAHDQYVMPGGIDPHTHMELPFMGTTASDDFY SGTAAGLSGGTTSIIDFVIPSPKQPLMDAFREWRGWAEKAASDYGFHVAVTWWDDSVHRDMGTLVREHGVSSFKHFMAYK NAIMADDEVLVNSFTRSLELGALPTVHAENGELVFQLQKALLARGITGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY IVHVSAKDAVDVITRARSEGLRVFGEVLPGHLVIDEAVYRDPDWTRAAAHVMSPPFRSAEHREALWRGLQSGQLHTTATD HCVFCASQKAMGREDFTKIPNGCGGVEDRMSVLWHHGVNHGRITPNEFVRITSTNAAQIFNLYPRKGAVQVGADADLVVW DPAATKTISVKTHHQQVDFNVFEGMTVQGVATHTLTRGALAWADGELRAVRGAGRYLKRPPGAGYYEAARIANRLREPHP VERAG >Mature_484_residues AILIRGGTVVDADRSYRADVLCADPQDGGTILQIAEQIDAPAGATVVDAHDQYVMPGGIDPHTHMELPFMGTTASDDFYS GTAAGLSGGTTSIIDFVIPSPKQPLMDAFREWRGWAEKAASDYGFHVAVTWWDDSVHRDMGTLVREHGVSSFKHFMAYKN AIMADDEVLVNSFTRSLELGALPTVHAENGELVFQLQKALLARGITGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVYI VHVSAKDAVDVITRARSEGLRVFGEVLPGHLVIDEAVYRDPDWTRAAAHVMSPPFRSAEHREALWRGLQSGQLHTTATDH CVFCASQKAMGREDFTKIPNGCGGVEDRMSVLWHHGVNHGRITPNEFVRITSTNAAQIFNLYPRKGAVQVGADADLVVWD PAATKTISVKTHHQQVDFNVFEGMTVQGVATHTLTRGALAWADGELRAVRGAGRYLKRPPGAGYYEAARIANRLREPHPV ERAG
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=489, Percent_Identity=50.5112474437628, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI4503379, Length=487, Percent_Identity=43.5318275154004, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI4503377, Length=484, Percent_Identity=43.3884297520661, Blast_Score=422, Evalue=1e-118, Organism=Homo sapiens, GI190194363, Length=487, Percent_Identity=44.9691991786448, Blast_Score=419, Evalue=1e-117, Organism=Homo sapiens, GI4503051, Length=476, Percent_Identity=43.4873949579832, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI62422571, Length=476, Percent_Identity=43.4873949579832, Blast_Score=405, Evalue=1e-113, Organism=Homo sapiens, GI19923821, Length=478, Percent_Identity=44.7698744769874, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI18105007, Length=410, Percent_Identity=26.3414634146341, Blast_Score=87, Evalue=4e-17, Organism=Escherichia coli, GI87082175, Length=465, Percent_Identity=37.8494623655914, Blast_Score=306, Evalue=2e-84, Organism=Escherichia coli, GI1786722, Length=453, Percent_Identity=26.7108167770419, Blast_Score=131, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17539558, Length=485, Percent_Identity=47.2164948453608, Blast_Score=449, Evalue=1e-126, Organism=Caenorhabditis elegans, GI71989490, Length=460, Percent_Identity=46.304347826087, Blast_Score=429, Evalue=1e-120, Organism=Caenorhabditis elegans, GI86575075, Length=472, Percent_Identity=30.9322033898305, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI193204318, Length=451, Percent_Identity=25.7206208425721, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322218, Length=442, Percent_Identity=26.6968325791855, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI221377917, Length=492, Percent_Identity=44.7154471544715, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI17137462, Length=490, Percent_Identity=44.2857142857143, Blast_Score=426, Evalue=1e-119, Organism=Drosophila melanogaster, GI24644287, Length=300, Percent_Identity=44.3333333333333, Blast_Score=258, Evalue=8e-69, Organism=Drosophila melanogaster, GI24644289, Length=241, Percent_Identity=46.4730290456432, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI18859883, Length=454, Percent_Identity=25.1101321585903, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24642586, Length=250, Percent_Identity=28.4, Blast_Score=77, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 52825; Mature: 52694
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILIRGGTVVDADRSYRADVLCADPQDGGTILQIAEQIDAPAGATVVDAHDQYVMPGGI CEEEEECCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCEECCCCC DPHTHMELPFMGTTASDDFYSGTAAGLSGGTTSIIDFVIPSPKQPLMDAFREWRGWAEKA CCCCEEECCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH ASDYGFHVAVTWWDDSVHRDMGTLVREHGVSSFKHFMAYKNAIMADDEVLVNSFTRSLEL CCCCCEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEC GALPTVHAENGELVFQLQKALLARGITGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY CCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEE IVHVSAKDAVDVITRARSEGLRVFGEVLPGHLVIDEAVYRDPDWTRAAAHVMSPPFRSAE EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHCCCCCCCHH HREALWRGLQSGQLHTTATDHCVFCASQKAMGREDFTKIPNGCGGVEDRMSVLWHHGVNH HHHHHHCCCCCCCEEECCCCCEEEECCCHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCC GRITPNEFVRITSTNAAQIFNLYPRKGAVQVGADADLVVWDPAATKTISVKTHHQQVDFN CCCCHHHEEEEECCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEEEECCCEECEE VFEGMTVQGVATHTLTRGALAWADGELRAVRGAGRYLKRPPGAGYYEAARIANRLREPHP HHCCCEEECHHHHHHHCCEEEECCCCEEEEHHCCHHHCCCCCCCHHHHHHHHHHCCCCCC VERAG CCCCC >Mature Secondary Structure AILIRGGTVVDADRSYRADVLCADPQDGGTILQIAEQIDAPAGATVVDAHDQYVMPGGI EEEEECCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEECCCCEECCCCC DPHTHMELPFMGTTASDDFYSGTAAGLSGGTTSIIDFVIPSPKQPLMDAFREWRGWAEKA CCCCEEECCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH ASDYGFHVAVTWWDDSVHRDMGTLVREHGVSSFKHFMAYKNAIMADDEVLVNSFTRSLEL CCCCCEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEC GALPTVHAENGELVFQLQKALLARGITGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY CCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEE IVHVSAKDAVDVITRARSEGLRVFGEVLPGHLVIDEAVYRDPDWTRAAAHVMSPPFRSAE EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHCCCCHHHHHHHHCCCCCCCHH HREALWRGLQSGQLHTTATDHCVFCASQKAMGREDFTKIPNGCGGVEDRMSVLWHHGVNH HHHHHHCCCCCCCEEECCCCCEEEECCCHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCC GRITPNEFVRITSTNAAQIFNLYPRKGAVQVGADADLVVWDPAATKTISVKTHHQQVDFN CCCCHHHEEEEECCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEEEECCCEECEE VFEGMTVQGVATHTLTRGALAWADGELRAVRGAGRYLKRPPGAGYYEAARIANRLREPHP HHCCCEEECHHHHHHHCCEEEECCCCEEEEHHCCHHHCCCCCCCHHHHHHHHHHCCCCCC VERAG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]