| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107023097
Identifier: 107023097
GI number: 107023097
Start: 1719024
End: 1719995
Strand: Reverse
Name: 107023097
Synonym: Bcen_1546
Alternate gene names: NA
Gene position: 1719995-1719024 (Counterclockwise)
Preceding gene: 107023098
Following gene: 107023093
Centisome position: 52.21
GC content: 71.3
Gene sequence:
>972_bases ATGAGCGCCCATCCCGACATGCAGGACCTGGTGGCCGCGCTGCCGGACGGACGGGCGTCCGTCGCCGCGCCGGCGCTCGC GCGTCAGCTCGAACGGATCGCGACCGCGCTCGAGGCGCTCGCGGGCACCCGCCCGCCGGCGGCCGTCGATTTCGATGCGG CCATCGCGTTTCGCTGGCGCGGTTTCGGCGCGGGCCATCAAACGGCGCCGCTCGAACCGATCGCCGCGCCCGCGCTCGTC GCGTTCGACGCGCTGCGCAACGTCGGCCGCCAGGCGGCGATCGTCGAGCGGAACACGCGGCAGTTCGTGCACGGGTTCGC GGCCAATCACGTGTTGCTGACCGGCGCGCGCGGCACCGGCAAGTCGTCGATCGTGAAGGCGTGCCTGCATGCGTTCGCGG CGCACGGTTTGCGGCTGATCGAGGTCAGCAAGGAAGGGCTGAACGATCTGCCGGCGATCGTCGAGCTGGTGCGCGCGCGG CCCGAGCGCTACCTCGTGTTTTGCGACGACCTGTCGTTCGAGGCCGGCGAGACCGGCTACAAGGGGCTCAAGACGGTGCT CGACGGCTCGGTCGCGAGCGACCTGTCGAACGTGCTGGTGTACGCGACGTCGAATCGGCGCCACCTGATGCCCGAGCAGG CGAGCGACAACGCGAACGTGACGCGCGCGGAGAACGGCGAGCTGCATCCGGGCGACGCGGTCGAGGAGCGGATTTCGCTG TCCGAGCGCTTCGGGATCTGGGTCACGTTCTACGGCTTCACGCAGGACGAGTACCTTGCCGTCGTCGAGAGCCGCCTCGG CGCGGCCGGTTTCGATGACGCGCAGATTCGTGCGGCGCGCGAGCCCGCGCTGCAGTGGGCGCTCGAACGCGGCGCGCGCT CGGGCCGTATCGCGGTGCAATTCGCGCGCGATTACGCGGGACGGCTCGCGGACGAAAGCGGCGAGGGTGCGCCCGTGCGC CCCGCTGCCTGA
Upstream 100 bases:
>100_bases TGCGGTTGTATCACCTGATCGGCGGCAGCGTCGCGCTGCTCGGCGTCGCGATCGCGCAGCGGTTTCCGTTTCAGGCCGGC GGGGCGCAAGGAATCCGTCA
Downstream 100 bases:
>100_bases GCCGCGCGCTACAGCAGCCGCTCGGACAGCACGCGGAATGCGACGTCGGGCACGACGAAGCACAGCGGTTCGCCGGTCGC GCCGATGCGGGCGAGGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease Subunit; AAA ATPase Family Protein; AAA Family ATPase; ABC Transporter ATPase; ATPase Family Protein; ATPase Of AAA+ Class; AAA ATPase Superfamily; Intermediate Filament Protein; AAA+ Superfamily ATPase
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSAHPDMQDLVAALPDGRASVAAPALARQLERIATALEALAGTRPPAAVDFDAAIAFRWRGFGAGHQTAPLEPIAAPALV AFDALRNVGRQAAIVERNTRQFVHGFAANHVLLTGARGTGKSSIVKACLHAFAAHGLRLIEVSKEGLNDLPAIVELVRAR PERYLVFCDDLSFEAGETGYKGLKTVLDGSVASDLSNVLVYATSNRRHLMPEQASDNANVTRAENGELHPGDAVEERISL SERFGIWVTFYGFTQDEYLAVVESRLGAAGFDDAQIRAAREPALQWALERGARSGRIAVQFARDYAGRLADESGEGAPVR PAA
Sequences:
>Translated_323_residues MSAHPDMQDLVAALPDGRASVAAPALARQLERIATALEALAGTRPPAAVDFDAAIAFRWRGFGAGHQTAPLEPIAAPALV AFDALRNVGRQAAIVERNTRQFVHGFAANHVLLTGARGTGKSSIVKACLHAFAAHGLRLIEVSKEGLNDLPAIVELVRAR PERYLVFCDDLSFEAGETGYKGLKTVLDGSVASDLSNVLVYATSNRRHLMPEQASDNANVTRAENGELHPGDAVEERISL SERFGIWVTFYGFTQDEYLAVVESRLGAAGFDDAQIRAAREPALQWALERGARSGRIAVQFARDYAGRLADESGEGAPVR PAA >Mature_322_residues SAHPDMQDLVAALPDGRASVAAPALARQLERIATALEALAGTRPPAAVDFDAAIAFRWRGFGAGHQTAPLEPIAAPALVA FDALRNVGRQAAIVERNTRQFVHGFAANHVLLTGARGTGKSSIVKACLHAFAAHGLRLIEVSKEGLNDLPAIVELVRARP ERYLVFCDDLSFEAGETGYKGLKTVLDGSVASDLSNVLVYATSNRRHLMPEQASDNANVTRAENGELHPGDAVEERISLS ERFGIWVTFYGFTQDEYLAVVESRLGAAGFDDAQIRAAREPALQWALERGARSGRIAVQFARDYAGRLADESGEGAPVRP AA
Specific function: Unknown
COG id: COG2607
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34562; Mature: 34431
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHPDMQDLVAALPDGRASVAAPALARQLERIATALEALAGTRPPAAVDFDAAIAFRWR CCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC GFGAGHQTAPLEPIAAPALVAFDALRNVGRQAAIVERNTRQFVHGFAANHVLLTGARGTG CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCC KSSIVKACLHAFAAHGLRLIEVSKEGLNDLPAIVELVRARPERYLVFCDDLSFEAGETGY HHHHHHHHHHHHHHCCEEEEEECHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHH KGLKTVLDGSVASDLSNVLVYATSNRRHLMPEQASDNANVTRAENGELHPGDAVEERISL HHHHHHHCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHH SERFGIWVTFYGFTQDEYLAVVESRLGAAGFDDAQIRAAREPALQWALERGARSGRIAVQ HHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE FARDYAGRLADESGEGAPVRPAA EHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAHPDMQDLVAALPDGRASVAAPALARQLERIATALEALAGTRPPAAVDFDAAIAFRWR CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC GFGAGHQTAPLEPIAAPALVAFDALRNVGRQAAIVERNTRQFVHGFAANHVLLTGARGTG CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCC KSSIVKACLHAFAAHGLRLIEVSKEGLNDLPAIVELVRARPERYLVFCDDLSFEAGETGY HHHHHHHHHHHHHHCCEEEEEECHHCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHH KGLKTVLDGSVASDLSNVLVYATSNRRHLMPEQASDNANVTRAENGELHPGDAVEERISL HHHHHHHCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHH SERFGIWVTFYGFTQDEYLAVVESRLGAAGFDDAQIRAAREPALQWALERGARSGRIAVQ HHHCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE FARDYAGRLADESGEGAPVRPAA EHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA