Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is yyaM [H]

Identifier: 107023098

GI number: 107023098

Start: 1719992

End: 1720900

Strand: Reverse

Name: yyaM [H]

Synonym: Bcen_1547

Alternate gene names: 107023098

Gene position: 1720900-1719992 (Counterclockwise)

Preceding gene: 107023100

Following gene: 107023097

Centisome position: 52.23

GC content: 68.98

Gene sequence:

>909_bases
ATGAACAAGTCTCCTTTTCTGCTCCCCTTCTGCGCGATCGCGCTGTGGGCCGGCAACGTCGTCGTGTCGAAGCTGTCCGC
CTCGACGATCGACCCGTCGGCCATCACGTTCTACCGGTTGCTGCTTGCGGTGGCGCTGATGAGCGTCTTCACGCTGCGCC
CCGCGTGGCGCAATCGCGCGGTGCTCGTCGCGCACCTGCCGAAGCTCGCGACGCTCGGCTTTCTCGCGATGGCGCTGTTC
CAGAGCCTGTCCTACGAGGCCGCGAAGACGACCAGCGCGACCAACATGGCGATCATCACCGCGCTCGTACCGCTGATGAC
GATGCTGCTGAGCTCGCTGCTGCTCGGCGATCCGCCCGGCGCCGGCATGATCGGCGGCGGGGTGCTGTCGCTCGCGGGCG
TCGTCTATCTGATCGCCGAAGGGCATCCGACGGCGATCGCCGCGCGCGGCGTGCATCCGGGCGACCTGCTGATGCTGGCC
GCATCGGCCGCGTACGCGCTTTACGGCGTGCTGCTCAAGCGCTGGCGCATCGGCGCGCTGTCGGCCTGGCAGTCGACCTA
CGTGCAGGCGCTGGCCGCGCTCGGATTCCTGGTGCCGATGCTGTTGCGCTTGCCCGCGCAGGCCGCGTGGCCGACGCGCG
CGAGCGTGCCGCTGATCCTCTACGCCGGCGTGCTGGCGTCGGTGGTGCTCCCGTATCTGTGGATGCAGGGCGTGCGGCTG
CTCGGCCCGAGCCGTTGCGCGATGTTCATGAACCTGCTGCCCGTGATGACGGCCGCCGGCGCGATCGTGCTGCTCGGCGA
ATCGCTGCGGTTGTATCACCTGATCGGCGGCAGCGTCGCGCTGCTCGGCGTCGCGATCGCGCAGCGGTTTCCGTTTCAGG
CCGGCGGGGCGCAAGGAATCCGTCAATGA

Upstream 100 bases:

>100_bases
GTCGTGACATTTTGGCGTGAGACAGGCAGTGGGCGGGCGGGCACGATGGCGTTCCGATTCACGCCAGCCTCCCTGTCACG
ATATTAATCCGTCAAACGCG

Downstream 100 bases:

>100_bases
GCGCCCATCCCGACATGCAGGACCTGGTGGCCGCGCTGCCGGACGGACGGGCGTCCGTCGCCGCGCCGGCGCTCGCGCGT
CAGCTCGAACGGATCGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MNKSPFLLPFCAIALWAGNVVVSKLSASTIDPSAITFYRLLLAVALMSVFTLRPAWRNRAVLVAHLPKLATLGFLAMALF
QSLSYEAAKTTSATNMAIITALVPLMTMLLSSLLLGDPPGAGMIGGGVLSLAGVVYLIAEGHPTAIAARGVHPGDLLMLA
ASAAYALYGVLLKRWRIGALSAWQSTYVQALAALGFLVPMLLRLPAQAAWPTRASVPLILYAGVLASVVLPYLWMQGVRL
LGPSRCAMFMNLLPVMTAAGAIVLLGESLRLYHLIGGSVALLGVAIAQRFPFQAGGAQGIRQ

Sequences:

>Translated_302_residues
MNKSPFLLPFCAIALWAGNVVVSKLSASTIDPSAITFYRLLLAVALMSVFTLRPAWRNRAVLVAHLPKLATLGFLAMALF
QSLSYEAAKTTSATNMAIITALVPLMTMLLSSLLLGDPPGAGMIGGGVLSLAGVVYLIAEGHPTAIAARGVHPGDLLMLA
ASAAYALYGVLLKRWRIGALSAWQSTYVQALAALGFLVPMLLRLPAQAAWPTRASVPLILYAGVLASVVLPYLWMQGVRL
LGPSRCAMFMNLLPVMTAAGAIVLLGESLRLYHLIGGSVALLGVAIAQRFPFQAGGAQGIRQ
>Mature_302_residues
MNKSPFLLPFCAIALWAGNVVVSKLSASTIDPSAITFYRLLLAVALMSVFTLRPAWRNRAVLVAHLPKLATLGFLAMALF
QSLSYEAAKTTSATNMAIITALVPLMTMLLSSLLLGDPPGAGMIGGGVLSLAGVVYLIAEGHPTAIAARGVHPGDLLMLA
ASAAYALYGVLLKRWRIGALSAWQSTYVQALAALGFLVPMLLRLPAQAAWPTRASVPLILYAGVLASVVLPYLWMQGVRL
LGPSRCAMFMNLLPVMTAAGAIVLLGESLRLYHLIGGSVALLGVAIAQRFPFQAGGAQGIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31778; Mature: 31778

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSPFLLPFCAIALWAGNVVVSKLSASTIDPSAITFYRLLLAVALMSVFTLRPAWRNRA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCE
VLVAHLPKLATLGFLAMALFQSLSYEAAKTTSATNMAIITALVPLMTMLLSSLLLGDPPG
EEEHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGMIGGGVLSLAGVVYLIAEGHPTAIAARGVHPGDLLMLAASAAYALYGVLLKRWRIGAL
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
SAWQSTYVQALAALGFLVPMLLRLPAQAAWPTRASVPLILYAGVLASVVLPYLWMQGVRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
LGPSRCAMFMNLLPVMTAAGAIVLLGESLRLYHLIGGSVALLGVAIAQRFPFQAGGAQGI
CCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
RQ
CC
>Mature Secondary Structure
MNKSPFLLPFCAIALWAGNVVVSKLSASTIDPSAITFYRLLLAVALMSVFTLRPAWRNRA
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCE
VLVAHLPKLATLGFLAMALFQSLSYEAAKTTSATNMAIITALVPLMTMLLSSLLLGDPPG
EEEHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AGMIGGGVLSLAGVVYLIAEGHPTAIAARGVHPGDLLMLAASAAYALYGVLLKRWRIGAL
CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH
SAWQSTYVQALAALGFLVPMLLRLPAQAAWPTRASVPLILYAGVLASVVLPYLWMQGVRL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH
LGPSRCAMFMNLLPVMTAAGAIVLLGESLRLYHLIGGSVALLGVAIAQRFPFQAGGAQGI
CCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC
RQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]