Definition Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence.
Accession NC_008060
Length 3,294,563

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The map label for this gene is 107023030

Identifier: 107023030

GI number: 107023030

Start: 1640703

End: 1642121

Strand: Reverse

Name: 107023030

Synonym: Bcen_1478

Alternate gene names: NA

Gene position: 1642121-1640703 (Counterclockwise)

Preceding gene: 107023031

Following gene: 107023029

Centisome position: 49.84

GC content: 74.0

Gene sequence:

>1419_bases
GTGGATGAACCGGTGGACGCCGCCGAAGCCGGAGGCGTGCCCGAGCCCGACCGGCTGGCGCGCGCGCTGCTGGAGCCGTC
GCGGATGCGCGCATGCACGGCGCGTGCGCGCCAGGTACTCGACGGGCTGGACACGGACGCCACGGGCCCGGTCGATGCCG
CGCGCGAGATGCGGCTGCGGGCGGCCTGCGCGTCGGCGCTGCTGCATACCGACGGCGACGCGCTGGCCGCCGCCGCGATG
TGGGACCGCACGCTCGGTCTCGCCGCGCACATCGGCGACGATGCGTTCGACGCGCGCGCGCTGGTCGGGCTGTGGAACAC
GATGCTGACGCTGTCGGACATTCACGAGTCGCTGCGCTACGCGACGCGCTTCGAGCGGGCGGCCGAGCGGCGCGGCGACC
GGTCGCAGCGGTTGCTGGCCAACACGATGGTCGCGACGTCGCTGCATTACTTCGGCGAGCATGCGCAGGCGCGCGAGCGG
CTGGAAGCGGCGACGGCCGAGCTGGCCGACGCGGGCGAACCGCCGTGCGCGCAGGCCGCGCTGGGCGTCGACATGGCGAC
GCTGGGGCGCACGATGCTGATCCGCCTGCTCTGGATGCAGGGCGAGCCCGAGCACGCGATGCGCGTCGCCGCGCAAGCGG
TCGAGCATGCGCGCCGCGACCCGTCGCCCCTCCCGCTGTGCGTCGTGCTCGGCGCGGCCGCCGTGCCGATCGCGCTGCGC
TACGGCGATCACGACATCACCTCCGACTATCTCGCGACGCTGCGCGCGACCGCCGACGCACACGGTTTCGACATCTGGCG
CAGTCACGCGGAATGCCTGACCGGCCAGTTCGACATCCAGGCCGGCCATCCCGGCGCGGGCCTCGCCCGGCTCGAGCCCG
CATTGCGGCGCGTCGAGGCGAGCGGCTTCCGGCGCGTGCTCGCGCCGTTGACCGTCGCATACGCGGAGGGCCTCGTGCGG
ACGGGCCGCGCCGATGAAGCGTGCACCCGGCTCGATGCGACGCTCGCACGCTGCCGTGCGCACGGCGAGCACCTGTTCGT
CCCCGAACTGCTGCGCGTGAGAGGCGTCGCGATGCTGGAACAGGCGCGCATCGTCGGCGCGGATCTCGCCGCCGCGTACG
AAGCCGACGGGCATCGCCATCTGCAGATGGCGATCCAGACCGCGAACGCGCAGGGCGCCGCGATGTGGGCGCTGCGCAGC
TCGCTCGATCTCGCCGATCACCTGATCGAGCGCGGGCACACCGCGCAGGCGTCGGCGCTGGTCGCCGGCGTCGCGCGGCA
CTTCGATCCGCATTCGCGCGCCCACGACGTGCGCCGTTTGCTGCGCGTGCAGAATTTCGTGCGTCAGGGTGCGCCGCTCG
CGCCGTGCCTGACGCGCGCGCGACGCGACACCGCCGACGCGGCGCAGCAGGCGGCATGA

Upstream 100 bases:

>100_bases
CGCGCGCCATGCGGCGTACGAGCGCGAGCGGGCGGGCGCACCTCCCGCGGCGCCCGTGCTGCTCGCCGACGTGCCGCCTG
CCGATGCGCCCGCGCCGGCC

Downstream 100 bases:

>100_bases
CGATGCGCGAACCCGGTACGGCCGCGCGGCCGCGCGATCGCAGCATGCATGCCGATGCGTGCGGTGCGGCCGCTTTCCCC
CGTTCGACGACCAGCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator Winged Helix Family; Winged Helix Family Transcriptional Regulator; Transcriptional Regulator Winged Helix Family Protein; LuxR Family Transcriptional Regulator; Adenylate Cyclase/Transcriptional Regulator; Adenylate Cyclase

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MDEPVDAAEAGGVPEPDRLARALLEPSRMRACTARARQVLDGLDTDATGPVDAAREMRLRAACASALLHTDGDALAAAAM
WDRTLGLAAHIGDDAFDARALVGLWNTMLTLSDIHESLRYATRFERAAERRGDRSQRLLANTMVATSLHYFGEHAQARER
LEAATAELADAGEPPCAQAALGVDMATLGRTMLIRLLWMQGEPEHAMRVAAQAVEHARRDPSPLPLCVVLGAAAVPIALR
YGDHDITSDYLATLRATADAHGFDIWRSHAECLTGQFDIQAGHPGAGLARLEPALRRVEASGFRRVLAPLTVAYAEGLVR
TGRADEACTRLDATLARCRAHGEHLFVPELLRVRGVAMLEQARIVGADLAAAYEADGHRHLQMAIQTANAQGAAMWALRS
SLDLADHLIERGHTAQASALVAGVARHFDPHSRAHDVRRLLRVQNFVRQGAPLAPCLTRARRDTADAAQQAA

Sequences:

>Translated_472_residues
MDEPVDAAEAGGVPEPDRLARALLEPSRMRACTARARQVLDGLDTDATGPVDAAREMRLRAACASALLHTDGDALAAAAM
WDRTLGLAAHIGDDAFDARALVGLWNTMLTLSDIHESLRYATRFERAAERRGDRSQRLLANTMVATSLHYFGEHAQARER
LEAATAELADAGEPPCAQAALGVDMATLGRTMLIRLLWMQGEPEHAMRVAAQAVEHARRDPSPLPLCVVLGAAAVPIALR
YGDHDITSDYLATLRATADAHGFDIWRSHAECLTGQFDIQAGHPGAGLARLEPALRRVEASGFRRVLAPLTVAYAEGLVR
TGRADEACTRLDATLARCRAHGEHLFVPELLRVRGVAMLEQARIVGADLAAAYEADGHRHLQMAIQTANAQGAAMWALRS
SLDLADHLIERGHTAQASALVAGVARHFDPHSRAHDVRRLLRVQNFVRQGAPLAPCLTRARRDTADAAQQAA
>Mature_472_residues
MDEPVDAAEAGGVPEPDRLARALLEPSRMRACTARARQVLDGLDTDATGPVDAAREMRLRAACASALLHTDGDALAAAAM
WDRTLGLAAHIGDDAFDARALVGLWNTMLTLSDIHESLRYATRFERAAERRGDRSQRLLANTMVATSLHYFGEHAQARER
LEAATAELADAGEPPCAQAALGVDMATLGRTMLIRLLWMQGEPEHAMRVAAQAVEHARRDPSPLPLCVVLGAAAVPIALR
YGDHDITSDYLATLRATADAHGFDIWRSHAECLTGQFDIQAGHPGAGLARLEPALRRVEASGFRRVLAPLTVAYAEGLVR
TGRADEACTRLDATLARCRAHGEHLFVPELLRVRGVAMLEQARIVGADLAAAYEADGHRHLQMAIQTANAQGAAMWALRS
SLDLADHLIERGHTAQASALVAGVARHFDPHSRAHDVRRLLRVQNFVRQGAPLAPCLTRARRDTADAAQQAA

Specific function: Unknown

COG id: COG3903

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50897; Mature: 50897

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEPVDAAEAGGVPEPDRLARALLEPSRMRACTARARQVLDGLDTDATGPVDAAREMRLR
CCCCCCCHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
AACASALLHTDGDALAAAAMWDRTLGLAAHIGDDAFDARALVGLWNTMLTLSDIHESLRY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRFERAAERRGDRSQRLLANTMVATSLHYFGEHAQARERLEAATAELADAGEPPCAQAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LGVDMATLGRTMLIRLLWMQGEPEHAMRVAAQAVEHARRDPSPLPLCVVLGAAAVPIALR
HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEE
YGDHDITSDYLATLRATADAHGFDIWRSHAECLTGQFDIQAGHPGAGLARLEPALRRVEA
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
SGFRRVLAPLTVAYAEGLVRTGRADEACTRLDATLARCRAHGEHLFVPELLRVRGVAMLE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QARIVGADLAAAYEADGHRHLQMAIQTANAQGAAMWALRSSLDLADHLIERGHTAQASAL
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VAGVARHFDPHSRAHDVRRLLRVQNFVRQGAPLAPCLTRARRDTADAAQQAA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEPVDAAEAGGVPEPDRLARALLEPSRMRACTARARQVLDGLDTDATGPVDAAREMRLR
CCCCCCCHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
AACASALLHTDGDALAAAAMWDRTLGLAAHIGDDAFDARALVGLWNTMLTLSDIHESLRY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ATRFERAAERRGDRSQRLLANTMVATSLHYFGEHAQARERLEAATAELADAGEPPCAQAA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LGVDMATLGRTMLIRLLWMQGEPEHAMRVAAQAVEHARRDPSPLPLCVVLGAAAVPIALR
HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEE
YGDHDITSDYLATLRATADAHGFDIWRSHAECLTGQFDIQAGHPGAGLARLEPALRRVEA
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
SGFRRVLAPLTVAYAEGLVRTGRADEACTRLDATLARCRAHGEHLFVPELLRVRGVAMLE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QARIVGADLAAAYEADGHRHLQMAIQTANAQGAAMWALRSSLDLADHLIERGHTAQASAL
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VAGVARHFDPHSRAHDVRRLLRVQNFVRQGAPLAPCLTRARRDTADAAQQAA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA