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The map label for this gene is cadC [C]

Identifier: 107023031

GI number: 107023031

Start: 1642114

End: 1643622

Strand: Reverse

Name: cadC [C]

Synonym: Bcen_1479

Alternate gene names: 107023031

Gene position: 1643622-1642114 (Counterclockwise)

Preceding gene: 107023033

Following gene: 107023030

Centisome position: 49.89

GC content: 71.9

Gene sequence:

>1509_bases
ATGATCCAGATCGGAACTTTGTCGGTGGACTTCGAGCAACGCGACATTCGCCGCCACGGCGCGTCGCTGCGCATCGGCGC
GCGCGCGCTCGACATTCTCGAAGTCCTGCACCGCGCGAGCGGTTCGGTCGTGTCGAAAGACGACATCATGGACGCGGTCT
GGCCGGGCCTGATCGTCGAGGAAAACCGGCTTCAGGTGCATGTGGCCACGCTGCGCAAGGCGCTCGGCGCGAGCCGCGAC
CTGATCAAGACGGTGCCCGGGCGCGGCTACCTGCTGGTCGCGAGCGCGTCGCCCGGACCGGATCTCGTGCCCGCGGCCGA
AGCGCCGGCCGTCGCCGTACCGCCGGCCGTCGCGGCGCTGCCGGATGCCTGCACGTCGTCGCTGCTCGCGCCGCTGGTCG
GGCGCGACGCCGAAATCGCGCAGATCGTCGACATGCTGGAACGCACGCCGGTCATCACGCTCGTCGGCGCGGGCGGCATC
GGCAAGACGAGTCTTGCGGTGCGCGTCGCGCACGGCATGCGCAGCCGCGCGCACGAGCGCGTGCTGTTCGTGGAACTGGC
GCGCGCGTCGACGCGCGACGACATGCTGATCGCGCTCGCCGCGGAGCTCGGCCTCGATACGCCCGGCGTGCCCGCCATCG
ACCGCATCGGCGACGCGTTCGCGACGTCGCGCTGCCTGCTGGTACTCGACAACGCGGAGCACATCGTCGATCTGGTGGCG
AGCCTCGTCGAAACGCTGACGTCGAGCGCCGGCTCGCTGCGCGTGCTCGTGACGAGCCGCGAGCCGCTGCACATCTCGGC
CGAAGCGGTGCTGCGCATGAGCCCGCTCGCGGTGCCGGACGGTAACGCGTCCGCCGCGGAAATCGTCCGTTGTTCGGCCG
TCGAGCTGTTCCTGGAACGCGTGCGCGCGGCCGCGCCGGATTGCGCGGTCGACGAAGCCGGCGTGCGGCTGATCGGCGAC
ATCTGCCGGCGCCTCGACGGGCTGCCGCTCGCGATCGAACTGGCCGCGGCGCGCGTGGCGACGCTCGGGCTCGCGGTCGT
CGCGTCGCGCCTCGACGACCGGCTGAACCTGCTGACGGGCGGGCTGCGCTCGGCGCTGCCGCGTCATCAGACGCTGCGCG
CGACGTTCGATTGGAGCTACGTGCTGCTCGACCGGGCCGCGCGCGCTGTTTCGCCGGATGGGGTGCTTCATCGGGCCGTT
TTCGTTCGATGCCGCGCGCGCGGTCGCGACCGAGCCCGGCACCTCGGCCGCGGACATGATCGCGGTGCTCGGCGAGCTGG
TGGCGAAATCGCTGGTGACCGTCGAGTTCGATGGCGCGTATGCGCGCTACCGGCTGACCGAATCGACGCGCGCGTACGCG
CTGGAAAAACTGCACAACGAGGGCGAGTTCGAGCGCATCGTCGCGCGCCATGCGGCGTACGAGCGCGAGCGGGCGGGCGC
ACCTCCCGCGGCGCCCGTGCTGCTCGCCGACGTGCCGCCTGCCGATGCGCCCGCGCCGGCCGTGGATGA

Upstream 100 bases:

>100_bases
GACATTTTCGTCCGGTGCAAGGGTGCGCCGGACGCGGACTTCCTGCCGGGTGAACTGCCGCGTTCATTCGCCAGCCATCC
CGAGGAACCCGGAGGCGGCC

Downstream 100 bases:

>100_bases
ACCGGTGGACGCCGCCGAAGCCGGAGGCGTGCCCGAGCCCGACCGGCTGGCGCGCGCGCTGCTGGAGCCGTCGCGGATGC
GCGCATGCACGGCGCGTGCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MIQIGTLSVDFEQRDIRRHGASLRIGARALDILEVLHRASGSVVSKDDIMDAVWPGLIVEENRLQVHVATLRKALGASRD
LIKTVPGRGYLLVASASPGPDLVPAAEAPAVAVPPAVAALPDACTSSLLAPLVGRDAEIAQIVDMLERTPVITLVGAGGI
GKTSLAVRVAHGMRSRAHERVLFVELARASTRDDMLIALAAELGLDTPGVPAIDRIGDAFATSRCLLVLDNAEHIVDLVA
SLVETLTSSAGSLRVLVTSREPLHISAEAVLRMSPLAVPDGNASAAEIVRCSAVELFLERVRAAAPDCAVDEAGVRLIGD
ICRRLDGLPLAIELAAARVATLGLAVVASRLDDRLNLLTGGLRSALPRHQTLRATFDWSYVLLDRAARAVSPDGVLHRAV
FVRCRARGRDRARHLGRGHDRGARRAGGEIAGDRRVRWRVCALPADRIDARVRAGKTAQRGRVRAHRRAPCGVRARAGGR
TSRGARAARRRAACRCARAGRG

Sequences:

>Translated_502_residues
MIQIGTLSVDFEQRDIRRHGASLRIGARALDILEVLHRASGSVVSKDDIMDAVWPGLIVEENRLQVHVATLRKALGASRD
LIKTVPGRGYLLVASASPGPDLVPAAEAPAVAVPPAVAALPDACTSSLLAPLVGRDAEIAQIVDMLERTPVITLVGAGGI
GKTSLAVRVAHGMRSRAHERVLFVELARASTRDDMLIALAAELGLDTPGVPAIDRIGDAFATSRCLLVLDNAEHIVDLVA
SLVETLTSSAGSLRVLVTSREPLHISAEAVLRMSPLAVPDGNASAAEIVRCSAVELFLERVRAAAPDCAVDEAGVRLIGD
ICRRLDGLPLAIELAAARVATLGLAVVASRLDDRLNLLTGGLRSALPRHQTLRATFDWSYVLLDRAARAVSPDGVLHRAV
FVRCRARGRDRARHLGRGHDRGARRAGGEIAGDRRVRWRVCALPADRIDARVRAGKTAQRGRVRAHRRAPCGVRARAGGR
TSRGARAARRRAACRCARAGRG
>Mature_502_residues
MIQIGTLSVDFEQRDIRRHGASLRIGARALDILEVLHRASGSVVSKDDIMDAVWPGLIVEENRLQVHVATLRKALGASRD
LIKTVPGRGYLLVASASPGPDLVPAAEAPAVAVPPAVAALPDACTSSLLAPLVGRDAEIAQIVDMLERTPVITLVGAGGI
GKTSLAVRVAHGMRSRAHERVLFVELARASTRDDMLIALAAELGLDTPGVPAIDRIGDAFATSRCLLVLDNAEHIVDLVA
SLVETLTSSAGSLRVLVTSREPLHISAEAVLRMSPLAVPDGNASAAEIVRCSAVELFLERVRAAAPDCAVDEAGVRLIGD
ICRRLDGLPLAIELAAARVATLGLAVVASRLDDRLNLLTGGLRSALPRHQTLRATFDWSYVLLDRAARAVSPDGVLHRAV
FVRCRARGRDRARHLGRGHDRGARRAGGEIAGDRRVRWRVCALPADRIDARVRAGKTAQRGRVRAHRRAPCGVRARAGGR
TSRGARAARRRAACRCARAGRG

Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]

COG id: COG3903

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR016032
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 53402; Mature: 53402

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIGTLSVDFEQRDIRRHGASLRIGARALDILEVLHRASGSVVSKDDIMDAVWPGLIVE
CEEEEEEEECHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEE
ENRLQVHVATLRKALGASRDLIKTVPGRGYLLVASASPGPDLVPAAEAPAVAVPPAVAAL
CCCEEEEHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCHHHHC
PDACTSSLLAPLVGRDAEIAQIVDMLERTPVITLVGAGGIGKTSLAVRVAHGMRSRAHER
CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
VLFVELARASTRDDMLIALAAELGLDTPGVPAIDRIGDAFATSRCLLVLDNAEHIVDLVA
EEEEEEHHCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHH
SLVETLTSSAGSLRVLVTSREPLHISAEAVLRMSPLAVPDGNASAAEIVRCSAVELFLER
HHHHHHHCCCCCEEEEEECCCCCEECHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH
VRAAAPDCAVDEAGVRLIGDICRRLDGLPLAIELAAARVATLGLAVVASRLDDRLNLLTG
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRSALPRHQTLRATFDWSYVLLDRAARAVSPDGVLHRAVFVRCRARGRDRARHLGRGHD
HHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCC
RGARRAGGEIAGDRRVRWRVCALPADRIDARVRAGKTAQRGRVRAHRRAPCGVRARAGGR
CCHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHCCHHHHCCCCCCCEECCCCC
TSRGARAARRRAACRCARAGRG
CCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIQIGTLSVDFEQRDIRRHGASLRIGARALDILEVLHRASGSVVSKDDIMDAVWPGLIVE
CEEEEEEEECHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEE
ENRLQVHVATLRKALGASRDLIKTVPGRGYLLVASASPGPDLVPAAEAPAVAVPPAVAAL
CCCEEEEHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCHHHHC
PDACTSSLLAPLVGRDAEIAQIVDMLERTPVITLVGAGGIGKTSLAVRVAHGMRSRAHER
CHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
VLFVELARASTRDDMLIALAAELGLDTPGVPAIDRIGDAFATSRCLLVLDNAEHIVDLVA
EEEEEEHHCCCCCCCEEEEHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHH
SLVETLTSSAGSLRVLVTSREPLHISAEAVLRMSPLAVPDGNASAAEIVRCSAVELFLER
HHHHHHHCCCCCEEEEEECCCCCEECHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHH
VRAAAPDCAVDEAGVRLIGDICRRLDGLPLAIELAAARVATLGLAVVASRLDDRLNLLTG
HHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRSALPRHQTLRATFDWSYVLLDRAARAVSPDGVLHRAVFVRCRARGRDRARHLGRGHD
HHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCC
RGARRAGGEIAGDRRVRWRVCALPADRIDARVRAGKTAQRGRVRAHRRAPCGVRARAGGR
CCHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHCCHHHHCCCCCCCEECCCCC
TSRGARAARRRAACRCARAGRG
CCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]