| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
Click here to switch to the map view.
The map label for this gene is 107022935
Identifier: 107022935
GI number: 107022935
Start: 1520448
End: 1522193
Strand: Reverse
Name: 107022935
Synonym: Bcen_1383
Alternate gene names: NA
Gene position: 1522193-1520448 (Counterclockwise)
Preceding gene: 107022936
Following gene: 107022934
Centisome position: 46.2
GC content: 69.76
Gene sequence:
>1746_bases ATGCCTGAATCGACCTATACGCTCGGCATCAACGCCGCCTTCCACGACAGCGCCGCGTGCATCGTGCGCGACGGCGTCGT GATCGCGGCGGCCGAGGACGAACGCTTCACGCACGTGAAGCACGCGAAGCGCCCGGTGCCGTTCTCGACCTGGGAGCTGC CTTTCCACGCGATCGACTATTGCCTCGCGGAAGCCGGCATCACGCTCGCGGATGTCGACCACGTCGCGTATTCGTACGAC CCGTGGTTCGAACTCGACCGCGAAGGCACGGCGCCGGCACTGACCTTGCCGCTGTCGCCGTCCGCGCATGCGCCGCGCGA GGATGGCGCGTCGCCGTGGCATCCGCTGTTCCTGTCGTCGATCGTCAACGCGCCGCGCCAGCTCGCGGGCGGCGCGCCGC ATCACCTGCAGCGGCGCTTTCGCGGCGTCACGCACGACGGGCCGTTCCGCTGGCATTTCATCGAGCACCATCTCGCGCAC GAGGCGAGCGCGTTTCTCGCGGCGCCGTTCGAGCGCTGCGCGGTGATGACGATGGACGGGCGCGGCGAGCGCGCGACGAC GAGCTACGGCGTGTTCGACGGCCGCGCGTACCGGCGGCTCGGGCAGGTCAACCTGCCGCATTCGCTCGGGCTGCTGTACG AGCGCTTGACCCGCTATCTCGGCTTCCTGCACTCGTCCGACGAATACAAGGTGATGGCGCTCGCGTCGTACGGCAAGCCG GTGTTCGCCGACGAGATGCGCAAGCTGGTGCGGTATCGCGGCGAAGGGCGCTACGACGTGCTCGACGCGGATCTCGCGGC GCTGTTCGGCCCGGCGCGCGAACGCGGCGGCCCGATCGAGCCGCATCACTGCGACATCGCGCATGCGTTGCAACTGGTGC TCGAGGAGACGACGCTGCAGGCGGTCGACTGGCTCGCCGCCGAGACCGGCGAGCGGCAGCTCGCGATGGCGGGCGGCGTC GCGCTGAATTGCGTGATGAACGCGCGGATTCGCGATCGCGGCCCGTTCGACGACGTATGGGTGCAGCCGGCCGCCGGCGA TGCGGGCACCGCGCTCGGCGCCGCGCTGTGGACCGACTTCCGGATGCGCGGTGCGCGCGGCGACTGGCGGATGGATCACG CGTATCTCGGGCCGGCGTACGACGACGACGCGATCGAGGCGTTCCTGAAGGAAGCGCAGCTGCCGTACCGGCGCCTTGCC GACGTCGCCGCGCAGACGGCCGCGCTGCTCGCGGCGAACCGCGTGATCGGCTGGTTCCAGGGGCGCATGGAGTTCGGCCC GCGCGCGCTCGGCGCACGGTCGATCCTCGCGTCGCCGATCGATCCGGACATGCAGCAGAAGCTGAACCGGATCAAGGATC GCGAGGATTTCCGGCCGGTCGCGCCGGTCGTGCTCGAAGACCGTGCGCATCACTGGTTCAGCGGCGGCCGGCGCACGCCG CTGCGCGCGCCGTTCATGCTGTTCGTGTACGACGTCTTGCCCGAGCGCGCCGCGAAGATTCCGGCCGTGCGTCACATCGA CGGCACCGCGCGCGTGCAGACCGTCGACGAAACCCAGCATCCGCTGCTGCATGCGTTGCTGACCGAGTTCGACGCGCTCA CCGGCGTGCCGGTGCTCGTCAACACGTCGTTCAACACGCGCGGCGAACCGATCGTGTGCTCGCCGCGCGACGCGATCGAA TGCTTCTGGACCTCGCCGCTCGATGCGCTCGTGATCGGCCCGTTCCTGCTGGAGAAGCCGCGATGA
Upstream 100 bases:
>100_bases CGCGGCCGAGTGGGCTGCCGCCCACGACGAAGGCGAGCCGGTCGCGGCGCACGCATCGAACGTGATTCCGTTCGCGCACG TCATCACGAGGAACTGACGC
Downstream 100 bases:
>100_bases ACATGCGCGACACGCACCTGCCGCCCGTGGTGTCGGTGGTCGTGCCGACCTACCGGCGGCCCGATCTGCTCGAACGCTGC CTCGACGCGCTGTGCGCGCA
Product: carbamoyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MPESTYTLGINAAFHDSAACIVRDGVVIAAAEDERFTHVKHAKRPVPFSTWELPFHAIDYCLAEAGITLADVDHVAYSYD PWFELDREGTAPALTLPLSPSAHAPREDGASPWHPLFLSSIVNAPRQLAGGAPHHLQRRFRGVTHDGPFRWHFIEHHLAH EASAFLAAPFERCAVMTMDGRGERATTSYGVFDGRAYRRLGQVNLPHSLGLLYERLTRYLGFLHSSDEYKVMALASYGKP VFADEMRKLVRYRGEGRYDVLDADLAALFGPARERGGPIEPHHCDIAHALQLVLEETTLQAVDWLAAETGERQLAMAGGV ALNCVMNARIRDRGPFDDVWVQPAAGDAGTALGAALWTDFRMRGARGDWRMDHAYLGPAYDDDAIEAFLKEAQLPYRRLA DVAAQTAALLAANRVIGWFQGRMEFGPRALGARSILASPIDPDMQQKLNRIKDREDFRPVAPVVLEDRAHHWFSGGRRTP LRAPFMLFVYDVLPERAAKIPAVRHIDGTARVQTVDETQHPLLHALLTEFDALTGVPVLVNTSFNTRGEPIVCSPRDAIE CFWTSPLDALVIGPFLLEKPR
Sequences:
>Translated_581_residues MPESTYTLGINAAFHDSAACIVRDGVVIAAAEDERFTHVKHAKRPVPFSTWELPFHAIDYCLAEAGITLADVDHVAYSYD PWFELDREGTAPALTLPLSPSAHAPREDGASPWHPLFLSSIVNAPRQLAGGAPHHLQRRFRGVTHDGPFRWHFIEHHLAH EASAFLAAPFERCAVMTMDGRGERATTSYGVFDGRAYRRLGQVNLPHSLGLLYERLTRYLGFLHSSDEYKVMALASYGKP VFADEMRKLVRYRGEGRYDVLDADLAALFGPARERGGPIEPHHCDIAHALQLVLEETTLQAVDWLAAETGERQLAMAGGV ALNCVMNARIRDRGPFDDVWVQPAAGDAGTALGAALWTDFRMRGARGDWRMDHAYLGPAYDDDAIEAFLKEAQLPYRRLA DVAAQTAALLAANRVIGWFQGRMEFGPRALGARSILASPIDPDMQQKLNRIKDREDFRPVAPVVLEDRAHHWFSGGRRTP LRAPFMLFVYDVLPERAAKIPAVRHIDGTARVQTVDETQHPLLHALLTEFDALTGVPVLVNTSFNTRGEPIVCSPRDAIE CFWTSPLDALVIGPFLLEKPR >Mature_580_residues PESTYTLGINAAFHDSAACIVRDGVVIAAAEDERFTHVKHAKRPVPFSTWELPFHAIDYCLAEAGITLADVDHVAYSYDP WFELDREGTAPALTLPLSPSAHAPREDGASPWHPLFLSSIVNAPRQLAGGAPHHLQRRFRGVTHDGPFRWHFIEHHLAHE ASAFLAAPFERCAVMTMDGRGERATTSYGVFDGRAYRRLGQVNLPHSLGLLYERLTRYLGFLHSSDEYKVMALASYGKPV FADEMRKLVRYRGEGRYDVLDADLAALFGPARERGGPIEPHHCDIAHALQLVLEETTLQAVDWLAAETGERQLAMAGGVA LNCVMNARIRDRGPFDDVWVQPAAGDAGTALGAALWTDFRMRGARGDWRMDHAYLGPAYDDDAIEAFLKEAQLPYRRLAD VAAQTAALLAANRVIGWFQGRMEFGPRALGARSILASPIDPDMQQKLNRIKDREDFRPVAPVVLEDRAHHWFSGGRRTPL RAPFMLFVYDVLPERAAKIPAVRHIDGTARVQTVDETQHPLLHALLTEFDALTGVPVLVNTSFNTRGEPIVCSPRDAIEC FWTSPLDALVIGPFLLEKPR
Specific function: Unknown
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 64562; Mature: 64431
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESTYTLGINAAFHDSAACIVRDGVVIAAAEDERFTHVKHAKRPVPFSTWELPFHAIDY CCCCEEEEEEEEEECCCCEEEEECCEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHHH CLAEAGITLADVDHVAYSYDPWFELDREGTAPALTLPLSPSAHAPREDGASPWHPLFLSS HHHHCCCEEEEHHHHHCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHH IVNAPRQLAGGAPHHLQRRFRGVTHDGPFRWHFIEHHLAHEASAFLAAPFERCAVMTMDG HHCCHHHHCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHEEEEEECC RGERATTSYGVFDGRAYRRLGQVNLPHSLGLLYERLTRYLGFLHSSDEYKVMALASYGKP CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC VFADEMRKLVRYRGEGRYDVLDADLAALFGPARERGGPIEPHHCDIAHALQLVLEETTLQ HHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH AVDWLAAETGERQLAMAGGVALNCVMNARIRDRGPFDDVWVQPAAGDAGTALGAALWTDF HHHHHHHCCCCCEEEHHCCEEEEEEEECEECCCCCCCHHEEECCCCCCHHHHHHHHHHHH RMRGARGDWRMDHAYLGPAYDDDAIEAFLKEAQLPYRRLADVAAQTAALLAANRVIGWFQ HHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRMEFGPRALGARSILASPIDPDMQQKLNRIKDREDFRPVAPVVLEDRAHHWFSGGRRTP CHHHCCCHHHCCHHHHCCCCCHHHHHHHHHHCCHHCCCCCCCHHCCCCCHHHHCCCCCCC LRAPFMLFVYDVLPERAAKIPAVRHIDGTARVQTVDETQHPLLHALLTEFDALTGVPVLV CCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEE NTSFNTRGEPIVCSPRDAIECFWTSPLDALVIGPFLLEKPR ECCCCCCCCEEEECCCHHHEEEECCCHHHHHHCHHHHCCCC >Mature Secondary Structure PESTYTLGINAAFHDSAACIVRDGVVIAAAEDERFTHVKHAKRPVPFSTWELPFHAIDY CCCEEEEEEEEEECCCCEEEEECCEEEEEECCCHHHHHHHCCCCCCCCCCCCCHHHHHH CLAEAGITLADVDHVAYSYDPWFELDREGTAPALTLPLSPSAHAPREDGASPWHPLFLSS HHHHCCCEEEEHHHHHCCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHH IVNAPRQLAGGAPHHLQRRFRGVTHDGPFRWHFIEHHLAHEASAFLAAPFERCAVMTMDG HHCCHHHHCCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHEEEEEECC RGERATTSYGVFDGRAYRRLGQVNLPHSLGLLYERLTRYLGFLHSSDEYKVMALASYGKP CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC VFADEMRKLVRYRGEGRYDVLDADLAALFGPARERGGPIEPHHCDIAHALQLVLEETTLQ HHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHH AVDWLAAETGERQLAMAGGVALNCVMNARIRDRGPFDDVWVQPAAGDAGTALGAALWTDF HHHHHHHCCCCCEEEHHCCEEEEEEEECEECCCCCCCHHEEECCCCCCHHHHHHHHHHHH RMRGARGDWRMDHAYLGPAYDDDAIEAFLKEAQLPYRRLADVAAQTAALLAANRVIGWFQ HHCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GRMEFGPRALGARSILASPIDPDMQQKLNRIKDREDFRPVAPVVLEDRAHHWFSGGRRTP CHHHCCCHHHCCHHHHCCCCCHHHHHHHHHHCCHHCCCCCCCHHCCCCCHHHHCCCCCCC LRAPFMLFVYDVLPERAAKIPAVRHIDGTARVQTVDETQHPLLHALLTEFDALTGVPVLV CCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEE NTSFNTRGEPIVCSPRDAIECFWTSPLDALVIGPFLLEKPR ECCCCCCCCEEEECCCHHHEEEECCCHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]