| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is ycdQ [C]
Identifier: 107022934
GI number: 107022934
Start: 1519450
End: 1520451
Strand: Reverse
Name: ycdQ [C]
Synonym: Bcen_1382
Alternate gene names: 107022934
Gene position: 1520451-1519450 (Counterclockwise)
Preceding gene: 107022935
Following gene: 107022933
Centisome position: 46.15
GC content: 71.16
Gene sequence:
>1002_bases ATGAACATGCGCGACACGCACCTGCCGCCCGTGGTGTCGGTGGTCGTGCCGACCTACCGGCGGCCCGATCTGCTCGAACG CTGCCTCGACGCGCTGTGCGCGCAGGTGTTCGATCCGACCACCTACGAGATCGTCGTCGTGGACGACGATCCGGCCGGCA GTGCGCGCGCCGTCGTCGATGCGTGCCGCGCACGCGTGACCGACGTGCCGGTGATCCGCTACATGACCGCGCCCGACACG CAGGGGCCGGCCGGCGCGCGCAACGTCGGCTGGCGCAGCGCGGGCGGTGCGCTGATCGCATTCACCGACGACGACACGAT CCCCGACCCGACCTGGCTGCGCCATGGCGCAGCCGCGCTGCTGGCCGAGCCGTCGGCGTCGGCCGCGGCCGGCCGGATCG ACGTGCCGTTGCGGCCGCGCCCGACCGACTACGAACGCGACGCGGCAGGGCTCGCGCAGGCGGAATTCGCGACCGCGAAC TGCTTCGTGCGGCGCGCGGCGCTCGAACGCATCGGCGGCTTCGACGAACGCTTCACGCGCGCGTGGCGCGAGGACGCCGA CCTGATGTTCGCGCTGCACGAGCATGCGGGGCCGATCGTCGAGGCCGACGCCGCGCGCATCGTGCATCCGGTGCGCCCCG CGCGCTGGGGATCGAGCATCGGCGCGCAGTCGAAGGTGTATTTCGATGCGCTGTTGTACAAGAAGCATCGCACGACCTAC CGGCGTCATATCCGGCCGACGCCGCCGTGGCATTACTACGCGGCCGTGCTCGCCGCGCTCGGCGCGATCGGCTGTTTCGC GGCCGGCTGGCCGGCGCCGGCCATCGTGTGCGCGGCGGTGTGGGCCGCGATCACTGCGGGGTTCTGCGCGAAACGGCTGC GCGGCACGCAGCTCACGGTGTCGCATGTGGCCGAGATGATCGTCACGTCCATCGCGATTCCGCCCGTGTCGCTGTACTGG CGCATGCGCGGCGCGCTTCACTTCAGAGTGTTATTCCTATGA
Upstream 100 bases:
>100_bases GCGAACCGATCGTGTGCTCGCCGCGCGACGCGATCGAATGCTTCTGGACCTCGCCGCTCGATGCGCTCGTGATCGGCCCG TTCCTGCTGGAGAAGCCGCG
Downstream 100 bases:
>100_bases AGCTCGATCCCGGCGTCGATTCCGACGGCTCGCGCGGCCCGAAGCGGATCGCGGTGTTCCGCGCGTTGCAGCTCGGCGAC ATGCTGTGCGCGGTGCCCGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; HAD Family Hydrolase; Family 2 Glycosyl Transferase; Transferase; HAD-Superfamily Hydrolase Subfamily IIIA; Hydrolase HAD-Superfamily Subfamily IIIA; Glycosyltransferase; Membrane Sugar Transferase; Membrane-Anchored Glycosyltransferase; Histidinol-Phosphate Phosphatase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MNMRDTHLPPVVSVVVPTYRRPDLLERCLDALCAQVFDPTTYEIVVVDDDPAGSARAVVDACRARVTDVPVIRYMTAPDT QGPAGARNVGWRSAGGALIAFTDDDTIPDPTWLRHGAAALLAEPSASAAAGRIDVPLRPRPTDYERDAAGLAQAEFATAN CFVRRAALERIGGFDERFTRAWREDADLMFALHEHAGPIVEADAARIVHPVRPARWGSSIGAQSKVYFDALLYKKHRTTY RRHIRPTPPWHYYAAVLAALGAIGCFAAGWPAPAIVCAAVWAAITAGFCAKRLRGTQLTVSHVAEMIVTSIAIPPVSLYW RMRGALHFRVLFL
Sequences:
>Translated_333_residues MNMRDTHLPPVVSVVVPTYRRPDLLERCLDALCAQVFDPTTYEIVVVDDDPAGSARAVVDACRARVTDVPVIRYMTAPDT QGPAGARNVGWRSAGGALIAFTDDDTIPDPTWLRHGAAALLAEPSASAAAGRIDVPLRPRPTDYERDAAGLAQAEFATAN CFVRRAALERIGGFDERFTRAWREDADLMFALHEHAGPIVEADAARIVHPVRPARWGSSIGAQSKVYFDALLYKKHRTTY RRHIRPTPPWHYYAAVLAALGAIGCFAAGWPAPAIVCAAVWAAITAGFCAKRLRGTQLTVSHVAEMIVTSIAIPPVSLYW RMRGALHFRVLFL >Mature_333_residues MNMRDTHLPPVVSVVVPTYRRPDLLERCLDALCAQVFDPTTYEIVVVDDDPAGSARAVVDACRARVTDVPVIRYMTAPDT QGPAGARNVGWRSAGGALIAFTDDDTIPDPTWLRHGAAALLAEPSASAAAGRIDVPLRPRPTDYERDAAGLAQAEFATAN CFVRRAALERIGGFDERFTRAWREDADLMFALHEHAGPIVEADAARIVHPVRPARWGSSIGAQSKVYFDALLYKKHRTTY RRHIRPTPPWHYYAAVLAALGAIGCFAAGWPAPAIVCAAVWAAITAGFCAKRLRGTQLTVSHVAEMIVTSIAIPPVSLYW RMRGALHFRVLFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36390; Mature: 36390
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMRDTHLPPVVSVVVPTYRRPDLLERCLDALCAQVFDPTTYEIVVVDDDPAGSARAVVD CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH ACRARVTDVPVIRYMTAPDTQGPAGARNVGWRSAGGALIAFTDDDTIPDPTWLRHGAAAL HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCHHH LAEPSASAAAGRIDVPLRPRPTDYERDAAGLAQAEFATANCFVRRAALERIGGFDERFTR HCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AWREDADLMFALHEHAGPIVEADAARIVHPVRPARWGSSIGAQSKVYFDALLYKKHRTTY HHHCCHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RRHIRPTPPWHYYAAVLAALGAIGCFAAGWPAPAIVCAAVWAAITAGFCAKRLRGTQLTV HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEH SHVAEMIVTSIAIPPVSLYWRMRGALHFRVLFL HHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEC >Mature Secondary Structure MNMRDTHLPPVVSVVVPTYRRPDLLERCLDALCAQVFDPTTYEIVVVDDDPAGSARAVVD CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH ACRARVTDVPVIRYMTAPDTQGPAGARNVGWRSAGGALIAFTDDDTIPDPTWLRHGAAAL HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCHHH LAEPSASAAAGRIDVPLRPRPTDYERDAAGLAQAEFATANCFVRRAALERIGGFDERFTR HCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AWREDADLMFALHEHAGPIVEADAARIVHPVRPARWGSSIGAQSKVYFDALLYKKHRTTY HHHCCHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RRHIRPTPPWHYYAAVLAALGAIGCFAAGWPAPAIVCAAVWAAITAGFCAKRLRGTQLTV HHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEH SHVAEMIVTSIAIPPVSLYWRMRGALHFRVLFL HHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA