| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022932
Identifier: 107022932
GI number: 107022932
Start: 1517425
End: 1518375
Strand: Reverse
Name: 107022932
Synonym: Bcen_1380
Alternate gene names: NA
Gene position: 1518375-1517425 (Counterclockwise)
Preceding gene: 107022933
Following gene: 107022930
Centisome position: 46.09
GC content: 67.61
Gene sequence:
>951_bases ATGTCACGTAAGCGGTTGCGCGTGCTCACCTGGCACGTGCATGGCAACTACCTGTATTACCTGTCGCAGGCGCCGCACGA TTTCTACATCGTGACGAAACCGCAGCATCCGCCTGGCTATGCGGGCCGCGTCGGGCACCTGCCGTGGGGTGACAACGTGC ACGAGGTGCCGGCCGAGTGCGTGCGCGACACCGAATTCGACTGCGTGCTGTACCAGCACGCGAAGCACTACCAGCACGAC CGCCTGCGGCTGCTGAGCGAAGCGCAGCGCGCGCTGCCGACGCTGTTCGTCGAGCACGATCCGCCGCGCGAGCATCCGAC CGACACGCTGCATCCGGTGCAGGACCCGAACGTGTTGCTGGTGCACGTGACGCCGTTCAACGCGCTGATGTGGGACAACG GCGTGACGCCGACGCGCGTGATCGAGCATGGCGTGCTGATGCCCGAAGGTGTCGAGTATCACGGCACGCTGCCGAAGGGC GTGGCCGTCGTGAACAACCTCGCGCGCCGCGGCCGGCGCCTCGGCGCGGACCTGTTCGAGGTCGTGCGGCACAGCGTGCC GATCGATCTGGTCGGGATGGGGTCGAGCGAGCTTGGCGGGATCGGCGAGGTGCCGAACCCGGCGCTGCCGCAGTTCCTGT CGCACTACCGGTTCTTCTTCAATCCGATCCGCTATACGAGCCTCGGGCTCGCGGTGATCGAGGCGATGATGATCGGGTTG CCGGTCGTCGCGCTGGCGACGACCGAGATGGCGCAACTCGTGAAGACCGGCAGCAACGGCGTGGCCGATACGCGGCCGGC CGTGCTGATCGACGCGATGCGGATGCTGATCCGCGATCCGGAACTGGCGCGAGAGTGGGGCGCGGCGGCCAAACGCGACG CGTGCGAGCGATTCGGCATCGAGCGGTTCGCGCGCGACTGGGACGCCGCATTGCGCGACGTGACGGGGTGA
Upstream 100 bases:
>100_bases ATGTTCGATACGTGCCCGTACGGGCACGAGTGCGCGACGGCGATCGGCGTCGGCGACGTGATGGACCGGGCGGGCGAGCT GCTCGCGGAGGAGAGACGTC
Downstream 100 bases:
>100_bases CGGCGTGATGGCGTGACGGCGGCGTGACCCGCCGCACTTACGGCATCGTCGCGGGCGGCGAAGTGGAGGCGCTGCCGCCG TTCGACGCGTTCGCGGCCGG
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Group 1 Glycosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Protein; Group 1 Glycosyl Transferase Protein; LPS Biosynthesis Related Transferase
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSRKRLRVLTWHVHGNYLYYLSQAPHDFYIVTKPQHPPGYAGRVGHLPWGDNVHEVPAECVRDTEFDCVLYQHAKHYQHD RLRLLSEAQRALPTLFVEHDPPREHPTDTLHPVQDPNVLLVHVTPFNALMWDNGVTPTRVIEHGVLMPEGVEYHGTLPKG VAVVNNLARRGRRLGADLFEVVRHSVPIDLVGMGSSELGGIGEVPNPALPQFLSHYRFFFNPIRYTSLGLAVIEAMMIGL PVVALATTEMAQLVKTGSNGVADTRPAVLIDAMRMLIRDPELAREWGAAAKRDACERFGIERFARDWDAALRDVTG
Sequences:
>Translated_316_residues MSRKRLRVLTWHVHGNYLYYLSQAPHDFYIVTKPQHPPGYAGRVGHLPWGDNVHEVPAECVRDTEFDCVLYQHAKHYQHD RLRLLSEAQRALPTLFVEHDPPREHPTDTLHPVQDPNVLLVHVTPFNALMWDNGVTPTRVIEHGVLMPEGVEYHGTLPKG VAVVNNLARRGRRLGADLFEVVRHSVPIDLVGMGSSELGGIGEVPNPALPQFLSHYRFFFNPIRYTSLGLAVIEAMMIGL PVVALATTEMAQLVKTGSNGVADTRPAVLIDAMRMLIRDPELAREWGAAAKRDACERFGIERFARDWDAALRDVTG >Mature_315_residues SRKRLRVLTWHVHGNYLYYLSQAPHDFYIVTKPQHPPGYAGRVGHLPWGDNVHEVPAECVRDTEFDCVLYQHAKHYQHDR LRLLSEAQRALPTLFVEHDPPREHPTDTLHPVQDPNVLLVHVTPFNALMWDNGVTPTRVIEHGVLMPEGVEYHGTLPKGV AVVNNLARRGRRLGADLFEVVRHSVPIDLVGMGSSELGGIGEVPNPALPQFLSHYRFFFNPIRYTSLGLAVIEAMMIGLP VVALATTEMAQLVKTGSNGVADTRPAVLIDAMRMLIRDPELAREWGAAAKRDACERFGIERFARDWDAALRDVTG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35472; Mature: 35341
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKRLRVLTWHVHGNYLYYLSQAPHDFYIVTKPQHPPGYAGRVGHLPWGDNVHEVPAEC CCCCEEEEEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH VRDTEFDCVLYQHAKHYQHDRLRLLSEAQRALPTLFVEHDPPREHPTDTLHPVQDPNVLL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCEEE VHVTPFNALMWDNGVTPTRVIEHGVLMPEGVEYHGTLPKGVAVVNNLARRGRRLGADLFE EEECCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH VVRHSVPIDLVGMGSSELGGIGEVPNPALPQFLSHYRFFFNPIRYTSLGLAVIEAMMIGL HHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVVALATTEMAQLVKTGSNGVADTRPAVLIDAMRMLIRDPELAREWGAAAKRDACERFGI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH ERFARDWDAALRDVTG HHHHHHHHHHHHHCCC >Mature Secondary Structure SRKRLRVLTWHVHGNYLYYLSQAPHDFYIVTKPQHPPGYAGRVGHLPWGDNVHEVPAEC CCCEEEEEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH VRDTEFDCVLYQHAKHYQHDRLRLLSEAQRALPTLFVEHDPPREHPTDTLHPVQDPNVLL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCEEE VHVTPFNALMWDNGVTPTRVIEHGVLMPEGVEYHGTLPKGVAVVNNLARRGRRLGADLFE EEECCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH VVRHSVPIDLVGMGSSELGGIGEVPNPALPQFLSHYRFFFNPIRYTSLGLAVIEAMMIGL HHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVVALATTEMAQLVKTGSNGVADTRPAVLIDAMRMLIRDPELAREWGAAAKRDACERFGI HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHH ERFARDWDAALRDVTG HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA