| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is katE [H]
Identifier: 107022900
GI number: 107022900
Start: 1489719
End: 1491833
Strand: Reverse
Name: katE [H]
Synonym: Bcen_1348
Alternate gene names: 107022900
Gene position: 1491833-1489719 (Counterclockwise)
Preceding gene: 107022901
Following gene: 107022899
Centisome position: 45.28
GC content: 69.31
Gene sequence:
>2115_bases ATGACGACTCCCCCATCCGCCGGCAAGACGCCCCCGACGCAACCGACGCAACCGCCCGACAGCGCGAAATCGCGCCAGCT CGACGCGAATCGTGCGCGGCCCGACGGCGAGGCGCTGCGCACCAACCAGGGCGTGCGGATCGCCGACAACCAGAACACGC TGCGCGGCGGCGCGCGCGGCCCGTCGCTGCTCGAAGACTTCATCATGCGCGAGAAGATCACGCATTTCGATCACGAGCGC ATTCCGGAGCGGGTGGTGCATGCGCGCGGTTCGGCCGCGCACGGCGTGTTTCGCGTGTACGAGCCGATGGCCGACTACAC GAAGGCTGCGTTCCTGCAGGACCCGGCCGCCGAAACGCCGGTGTACGTGCGGTTCTCGACCGTGCAGGGGCCGCGCGGGT CGGCCGACACCGTGCGCGACGTGCGCGGCTTCGCGGTGAAGTTCTATACCCAGGAAGGCAACTACGATCTCGTCGGCAAC AACATGCCGGTGTTCTTCATCCAGGACGCGATCAAGTTTCCCGACTTCGTGCACGCGGTGAAGCCCGAGGCGCCGAACGA GATGCCGACCGGCGCGTCCGCGCACGACACGTTCTGGGATTTCGTGTCGCTGGTGCCGGAAACCACGCACATGGTGCTGT GGCTGATGTCGGACCGCGCACTGCCGGCGAGCTATCGCGCGATGGACGGCTTCGGCGTCCACACGTTCCGCTTCGTGAAC GCGGCCGGCGTCGAGCGGTTCGTGAAATTCCACTGGCGGCCCGTGAGCGGCGCGTATTCGCTGCTGTGGGACGAGGCGCA GCGGATCGCCGGCCACGATCCGGATTTCAACCGGCGCGACCTGTGGACGGCGATCGAGCGCGGCGACTATCCGGAGTTCG AACTCGGTGTGCAGCTGATCGATCCGGCCGATGCGGACAAATTCGACTTCGACCTGCTGGACCCGACCAAGCTCGTGCCG GAAGAGCTCGTGCCGGTGCGGCCGATCGGCCGGATGACGCTGAACCGCAACCCCGACAACTTCTTCGCGGAAACCGAGCA GGTCGCGTTTCACCCGGGCCACGTGGTGCCGGGCATCGATTTCACGAACGACCCGCTGCTGCAGGGGCGCTTGTTCTCGT ACACCGATACGCAGCTGAGCCGGCTCGGCGGCCCGAATTTCCACGAGATCCCGATCAACCGGCCGGTGTGCCCGTTCGCG AACAACCAGCGCGACGCGCTGCACCGGCAGACGATCAACGTCGGCCAGGCGTCGTACGAGCCGAATTCGACGAGCGGCGG CTGGCCGCGCGAGACGCCGCCCGCGCCCGCCGGCGGCGGGTTCGAGACCGTGCCCGAGCCGCTCGAAGGCCACAAGGTGC GCGTGCGCAGCGAATCGTTCGCCGACCATTTCTCGCAGGCCGCGCTGTTCTACCAGAGCATGACCGAGATCGAGCAGCGG CATATCCGCGACGCGTACTGCTTCGAGCTCGGCAAGGTGACGCAGCCGCACATTCGCGAACGGGTGGTCAACGAGATCAT CGCGCGCTTCGACGCGGGGCTCGCCGCGCAGGTCGCCGAACGGCTCGGGCTGCCCGCGCCGCAGGCGGCCGCGACGCCGG CCGTGCCGCAGCGCTCGCCGGCGCTGAGCCTGATCGGCCGCGCGAAGCCCGGCATCCGCTCGCGCAAGATCGCGCTGATC GCGACGCCCGGCGTGAATCCGGTGCTGGTCGAGCAGGTGCGCGACGCGTTGCAGGCCGCGCACGCGGTGCCGACGATCGT CGCGCCGACGCTCGCGCCGATCGGCGGCATCGTGCCGGAGGCGACGCTGGTCGGCATGCCGTCGGTGATGTTCGACGCGG TGTTCGTGTGCGGCGGCGACGGCGATGGCCGCGATCTCGCGCACAGCGCCGACGCCCGCCATTTCGTGCGGGAAGCGTTC AAGCACCTGAAGCCGATCGCGGCCGTCGGCTCCGGGCGGCAACTGCTCAGCGCCGCCCACCTGCCCGACCCGGCCGAAGG CGTGTGCGTCGGCCAGGCCGTCGATCTCGACGCGGTGCTGAACACGCTGTCGGATCACCTCGGCCAGCATCGCGTGTGGG CGCGCGAACAGCAGGCGGCGGAGCTGCCGGCATAG
Upstream 100 bases:
>100_bases GGCGCGCCGGGCCGGCTTTCCCTGCCGTCCGCACGCGTGCGCCGCGGCGCGTCGCCGTGCGGCAGCGGCTCCCTACCGAA TGCCACGAGGACACCTGACG
Downstream 100 bases:
>100_bases GGCCGGCATCGGGCCGACAGCGGCCGACAAGCGGCTTGCGCCGTACGGCGCGCTCGCCCTCGGGCGGGCGCGCATCCGGC AAGGAGGAACATGCATGGCA
Product: hydroperoxidase II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MTTPPSAGKTPPTQPTQPPDSAKSRQLDANRARPDGEALRTNQGVRIADNQNTLRGGARGPSLLEDFIMREKITHFDHER IPERVVHARGSAAHGVFRVYEPMADYTKAAFLQDPAAETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTQEGNYDLVGN NMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPETTHMVLWLMSDRALPASYRAMDGFGVHTFRFVN AAGVERFVKFHWRPVSGAYSLLWDEAQRIAGHDPDFNRRDLWTAIERGDYPEFELGVQLIDPADADKFDFDLLDPTKLVP EELVPVRPIGRMTLNRNPDNFFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLSRLGGPNFHEIPINRPVCPFA NNQRDALHRQTINVGQASYEPNSTSGGWPRETPPAPAGGGFETVPEPLEGHKVRVRSESFADHFSQAALFYQSMTEIEQR HIRDAYCFELGKVTQPHIRERVVNEIIARFDAGLAAQVAERLGLPAPQAAATPAVPQRSPALSLIGRAKPGIRSRKIALI ATPGVNPVLVEQVRDALQAAHAVPTIVAPTLAPIGGIVPEATLVGMPSVMFDAVFVCGGDGDGRDLAHSADARHFVREAF KHLKPIAAVGSGRQLLSAAHLPDPAEGVCVGQAVDLDAVLNTLSDHLGQHRVWAREQQAAELPA
Sequences:
>Translated_704_residues MTTPPSAGKTPPTQPTQPPDSAKSRQLDANRARPDGEALRTNQGVRIADNQNTLRGGARGPSLLEDFIMREKITHFDHER IPERVVHARGSAAHGVFRVYEPMADYTKAAFLQDPAAETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTQEGNYDLVGN NMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPETTHMVLWLMSDRALPASYRAMDGFGVHTFRFVN AAGVERFVKFHWRPVSGAYSLLWDEAQRIAGHDPDFNRRDLWTAIERGDYPEFELGVQLIDPADADKFDFDLLDPTKLVP EELVPVRPIGRMTLNRNPDNFFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLSRLGGPNFHEIPINRPVCPFA NNQRDALHRQTINVGQASYEPNSTSGGWPRETPPAPAGGGFETVPEPLEGHKVRVRSESFADHFSQAALFYQSMTEIEQR HIRDAYCFELGKVTQPHIRERVVNEIIARFDAGLAAQVAERLGLPAPQAAATPAVPQRSPALSLIGRAKPGIRSRKIALI ATPGVNPVLVEQVRDALQAAHAVPTIVAPTLAPIGGIVPEATLVGMPSVMFDAVFVCGGDGDGRDLAHSADARHFVREAF KHLKPIAAVGSGRQLLSAAHLPDPAEGVCVGQAVDLDAVLNTLSDHLGQHRVWAREQQAAELPA >Mature_703_residues TTPPSAGKTPPTQPTQPPDSAKSRQLDANRARPDGEALRTNQGVRIADNQNTLRGGARGPSLLEDFIMREKITHFDHERI PERVVHARGSAAHGVFRVYEPMADYTKAAFLQDPAAETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTQEGNYDLVGNN MPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPETTHMVLWLMSDRALPASYRAMDGFGVHTFRFVNA AGVERFVKFHWRPVSGAYSLLWDEAQRIAGHDPDFNRRDLWTAIERGDYPEFELGVQLIDPADADKFDFDLLDPTKLVPE ELVPVRPIGRMTLNRNPDNFFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLSRLGGPNFHEIPINRPVCPFAN NQRDALHRQTINVGQASYEPNSTSGGWPRETPPAPAGGGFETVPEPLEGHKVRVRSESFADHFSQAALFYQSMTEIEQRH IRDAYCFELGKVTQPHIRERVVNEIIARFDAGLAAQVAERLGLPAPQAAATPAVPQRSPALSLIGRAKPGIRSRKIALIA TPGVNPVLVEQVRDALQAAHAVPTIVAPTLAPIGGIVPEATLVGMPSVMFDAVFVCGGDGDGRDLAHSADARHFVREAFK HLKPIAAVGSGRQLLSAAHLPDPAEGVCVGQAVDLDAVLNTLSDHLGQHRVWAREQQAAELPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=497, Percent_Identity=41.046277665996, Blast_Score=356, Evalue=5e-98, Organism=Escherichia coli, GI48994891, Length=721, Percent_Identity=56.1719833564494, Blast_Score=786, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=419, Percent_Identity=43.9140811455847, Blast_Score=357, Evalue=9e-99, Organism=Caenorhabditis elegans, GI25147792, Length=418, Percent_Identity=43.3014354066986, Blast_Score=351, Evalue=7e-97, Organism=Caenorhabditis elegans, GI25151141, Length=411, Percent_Identity=44.7688564476886, Blast_Score=351, Evalue=8e-97, Organism=Saccharomyces cerevisiae, GI6320462, Length=352, Percent_Identity=44.8863636363636, Blast_Score=301, Evalue=2e-82, Organism=Saccharomyces cerevisiae, GI6321525, Length=513, Percent_Identity=35.4775828460039, Blast_Score=295, Evalue=1e-80, Organism=Drosophila melanogaster, GI17981717, Length=514, Percent_Identity=39.4941634241245, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI19920968, Length=422, Percent_Identity=42.8909952606635, Blast_Score=335, Evalue=8e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 - InterPro: IPR002818 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel; PF01965 DJ-1_PfpI [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 77252; Mature: 77121
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPPSAGKTPPTQPTQPPDSAKSRQLDANRARPDGEALRTNQGVRIADNQNTLRGGARG CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCC PSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYEPMADYTKAAFLQDPAAETP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC VYVRFSTVQGPRGSADTVRDVRGFAVKFYTQEGNYDLVGNNMPVFFIQDAIKFPDFVHAV EEEEEEECCCCCCCHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEECCHHCCCHHHHHC KPEAPNEMPTGASAHDTFWDFVSLVPETTHMVLWLMSDRALPASYRAMDGFGVHTFRFVN CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHCCCCCCHHHHHHH AAGVERFVKFHWRPVSGAYSLLWDEAQRIAGHDPDFNRRDLWTAIERGDYPEFELGVQLI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHCEEEE DPADADKFDFDLLDPTKLVPEELVPVRPIGRMTLNRNPDNFFAETEQVAFHPGHVVPGID CCCCCCCCCCCCCCCHHHCHHHCCCCCCCCCEEECCCCCHHHHCCHHEEECCCCCCCCCC FTNDPLLQGRLFSYTDTQLSRLGGPNFHEIPINRPVCPFANNQRDALHRQTINVGQASYE CCCCCCCCCEEECCCHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC PNSTSGGWPRETPPAPAGGGFETVPEPLEGHKVRVRSESFADHFSQAALFYQSMTEIEQR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH HIRDAYCFELGKVTQPHIRERVVNEIIARFDAGLAAQVAERLGLPAPQAAATPAVPQRSP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC ALSLIGRAKPGIRSRKIALIATPGVNPVLVEQVRDALQAAHAVPTIVAPTLAPIGGIVPE HHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC ATLVGMPSVMFDAVFVCGGDGDGRDLAHSADARHFVREAFKHLKPIAAVGSGRQLLSAAH HHHHCCCHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHC LPDPAEGVCVGQAVDLDAVLNTLSDHLGQHRVWAREQQAAELPA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTPPSAGKTPPTQPTQPPDSAKSRQLDANRARPDGEALRTNQGVRIADNQNTLRGGARG CCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCC PSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYEPMADYTKAAFLQDPAAETP HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC VYVRFSTVQGPRGSADTVRDVRGFAVKFYTQEGNYDLVGNNMPVFFIQDAIKFPDFVHAV EEEEEEECCCCCCCHHHHHHHCCEEEEEEEECCCEEEECCCCCEEEECCHHCCCHHHHHC KPEAPNEMPTGASAHDTFWDFVSLVPETTHMVLWLMSDRALPASYRAMDGFGVHTFRFVN CCCCCCCCCCCCCCHHHHHHHHHHCCCCHHEEEEEECCCCCCCHHHHCCCCCCHHHHHHH AAGVERFVKFHWRPVSGAYSLLWDEAQRIAGHDPDFNRRDLWTAIERGDYPEFELGVQLI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHCEEEE DPADADKFDFDLLDPTKLVPEELVPVRPIGRMTLNRNPDNFFAETEQVAFHPGHVVPGID CCCCCCCCCCCCCCCHHHCHHHCCCCCCCCCEEECCCCCHHHHCCHHEEECCCCCCCCCC FTNDPLLQGRLFSYTDTQLSRLGGPNFHEIPINRPVCPFANNQRDALHRQTINVGQASYE CCCCCCCCCEEECCCHHHHHHCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC PNSTSGGWPRETPPAPAGGGFETVPEPLEGHKVRVRSESFADHFSQAALFYQSMTEIEQR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH HIRDAYCFELGKVTQPHIRERVVNEIIARFDAGLAAQVAERLGLPAPQAAATPAVPQRSP HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC ALSLIGRAKPGIRSRKIALIATPGVNPVLVEQVRDALQAAHAVPTIVAPTLAPIGGIVPE HHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC ATLVGMPSVMFDAVFVCGGDGDGRDLAHSADARHFVREAFKHLKPIAAVGSGRQLLSAAH HHHHCCCHHHHCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHC LPDPAEGVCVGQAVDLDAVLNTLSDHLGQHRVWAREQQAAELPA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]