Click here to switch to the map view.

The map label for this gene is 107022899

Identifier: 107022899

GI number: 107022899

Start: 1488605

End: 1489624

Strand: Reverse

Name: 107022899

Synonym: Bcen_1347

Alternate gene names: NA

Gene position: 1489624-1488605 (Counterclockwise)

Preceding gene: 107022900

Following gene: 107022898

Centisome position: 45.21

GC content: 68.53

Gene sequence:

>1020_bases
ATGGCACCGCGGATGATTTGGAAAGGCGCGATCAGCTTCGGGCTCGTGCACGTGCCCGTGCAGTTGTTTCCGGCGACGCG
CACCGTGAAACCGTCGTTCCGGATGCTCGACAAGCGCTCGATGGACCCGATCGGCTATCGGCAGATCAACAAGCGCACCG
GCAAGGAGGTCACGCGCGAGGACATCGTGCGCGGCTACGAATACGAGAAGGAGCGCTACGTCGTGCTCACCGACGACGAG
ATCCGCGCGGCGAACCCGGAATCGACGCAGACCGTCGACATCCTGACCTTCGTCGACGAGGACGCCGTGTCGTTCCTCTA
TCTCGACACGCCGTACTACCTGGTGCCGGACCGCAAGGGCGAGAAGGTCTATGCGCTGCTGCGCGACGCGCTGAAGGACA
GCGGCAAGATCGGCATCGCGCTGGTGGTGATGCGCGACCGCCAGCACCTTGGCGCGCTGATCCCGGTCGGGCCGATGCTC
GCCCTCGATACGCTGCGCTGGCAGGAGGAACTGCGGCCGCTCGACGAGCTGTCGGTGCCGGCCGACGACGCGAAGGGCGC
GGGCGTCACCGCGCGCGAGCTCGGGATGGCGAAGAAGCTGATCGACGACATGTCCGGCAAATGGACCCCCGACGAATATC
ACGACACGTTCCGCGACGACATCCTCGAGCTGGTCGAGCGCAAGGTGCGCGCGGGCAAGATCGAGGAGATCGAGGACCGG
CCCGCGCAGACCGGCCGCGCGGCGAGCAACGTGGTCGATCTCACCGAGCTGCTGAAGCGCAGCCTGAAGGGCGGCGCGGG
GGCGCGCGCGGCGGATCTGCGTGCAGAGCGTGGCGAAGGGGAGGACGAGGCGTCTTCATCGTCGTCGTCGCGCGGCGGCG
CGCGCCGCAAGCCGGCGGCGAAATCCGCATCGAAGGGCGCGGCGACGAAAACCGCGGCGAAGAAGACCGCCGCGAAACGC
GGCGCGGCGAGCGCCCCCGCGGCAAAGAAGACGGCCGCGCGCCGCAAGCACGCGGCGTGA

Upstream 100 bases:

>100_bases
GCATAGGGCCGGCATCGGGCCGACAGCGGCCGACAAGCGGCTTGCGCCGTACGGCGCGCTCGCCCTCGGGCGGGCGCGCA
TCCGGCAAGGAGGAACATGC

Downstream 100 bases:

>100_bases
CGCCGATGACGCCGACTCCGATTTCGATTCCGGTTCCGGTTCCGGTTCCGGTTCCGACGAGGTGACGCGATGGCCGGCAA
GCTCGATCCGTATCGCCGCA

Product: Ku domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MAPRMIWKGAISFGLVHVPVQLFPATRTVKPSFRMLDKRSMDPIGYRQINKRTGKEVTREDIVRGYEYEKERYVVLTDDE
IRAANPESTQTVDILTFVDEDAVSFLYLDTPYYLVPDRKGEKVYALLRDALKDSGKIGIALVVMRDRQHLGALIPVGPML
ALDTLRWQEELRPLDELSVPADDAKGAGVTARELGMAKKLIDDMSGKWTPDEYHDTFRDDILELVERKVRAGKIEEIEDR
PAQTGRAASNVVDLTELLKRSLKGGAGARAADLRAERGEGEDEASSSSSSRGGARRKPAAKSASKGAATKTAAKKTAAKR
GAASAPAAKKTAARRKHAA

Sequences:

>Translated_339_residues
MAPRMIWKGAISFGLVHVPVQLFPATRTVKPSFRMLDKRSMDPIGYRQINKRTGKEVTREDIVRGYEYEKERYVVLTDDE
IRAANPESTQTVDILTFVDEDAVSFLYLDTPYYLVPDRKGEKVYALLRDALKDSGKIGIALVVMRDRQHLGALIPVGPML
ALDTLRWQEELRPLDELSVPADDAKGAGVTARELGMAKKLIDDMSGKWTPDEYHDTFRDDILELVERKVRAGKIEEIEDR
PAQTGRAASNVVDLTELLKRSLKGGAGARAADLRAERGEGEDEASSSSSSRGGARRKPAAKSASKGAATKTAAKKTAAKR
GAASAPAAKKTAARRKHAA
>Mature_338_residues
APRMIWKGAISFGLVHVPVQLFPATRTVKPSFRMLDKRSMDPIGYRQINKRTGKEVTREDIVRGYEYEKERYVVLTDDEI
RAANPESTQTVDILTFVDEDAVSFLYLDTPYYLVPDRKGEKVYALLRDALKDSGKIGIALVVMRDRQHLGALIPVGPMLA
LDTLRWQEELRPLDELSVPADDAKGAGVTARELGMAKKLIDDMSGKWTPDEYHDTFRDDILELVERKVRAGKIEEIEDRP
AQTGRAASNVVDLTELLKRSLKGGAGARAADLRAERGEGEDEASSSSSSRGGARRKPAAKSASKGAATKTAAKKTAAKRG
AASAPAAKKTAARRKHAA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 37232; Mature: 37101

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRMIWKGAISFGLVHVPVQLFPATRTVKPSFRMLDKRSMDPIGYRQINKRTGKEVTRE
CCCCHHHHHHHHHHHHEECCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DIVRGYEYEKERYVVLTDDEIRAANPESTQTVDILTFVDEDAVSFLYLDTPYYLVPDRKG
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCC
EKVYALLRDALKDSGKIGIALVVMRDRQHLGALIPVGPMLALDTLRWQEELRPLDELSVP
HHHHHHHHHHHHCCCCEEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCC
ADDAKGAGVTARELGMAKKLIDDMSGKWTPDEYHDTFRDDILELVERKVRAGKIEEIEDR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PAQTGRAASNVVDLTELLKRSLKGGAGARAADLRAERGEGEDEASSSSSSRGGARRKPAA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCH
KSASKGAATKTAAKKTAAKRGAASAPAAKKTAARRKHAA
HCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
APRMIWKGAISFGLVHVPVQLFPATRTVKPSFRMLDKRSMDPIGYRQINKRTGKEVTRE
CCCHHHHHHHHHHHHEECCEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
DIVRGYEYEKERYVVLTDDEIRAANPESTQTVDILTFVDEDAVSFLYLDTPYYLVPDRKG
HHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCC
EKVYALLRDALKDSGKIGIALVVMRDRQHLGALIPVGPMLALDTLRWQEELRPLDELSVP
HHHHHHHHHHHHCCCCEEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCC
ADDAKGAGVTARELGMAKKLIDDMSGKWTPDEYHDTFRDDILELVERKVRAGKIEEIEDR
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
PAQTGRAASNVVDLTELLKRSLKGGAGARAADLRAERGEGEDEASSSSSSRGGARRKPAA
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCH
KSASKGAATKTAAKKTAAKRGAASAPAAKKTAARRKHAA
HCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]