| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
Click here to switch to the map view.
The map label for this gene is 107022420
Identifier: 107022420
GI number: 107022420
Start: 939873
End: 940232
Strand: Reverse
Name: 107022420
Synonym: Bcen_0865
Alternate gene names: NA
Gene position: 940232-939873 (Counterclockwise)
Preceding gene: 107022425
Following gene: 107022417
Centisome position: 28.54
GC content: 69.17
Gene sequence:
>360_bases GTGTTCCGGCGCGGCGCGGCATGGCGCCGCGCCCCGCGCGCCGGGGTATGTCCGGTTCTCGTCACGTCGTATCGATCTTC GTTGGTGTCGCCGCACGCGGCCGGCCCGGGTAGCCCGGCCGGCCGGCGACGAAAACGTCAGATGATACAATATATCAACT TGATCCGTCAGGGTTTCGACAGCTTGAGTTATCGCCCCGCGCGGCTACAGCGGCAAGTCGAACTTGTCGCGCTACGGCCG GTTACGTGCCGCGAACGCGAGCATCCGCGCACGCGCATGCCCGCCGCGCGCCTCGTCGAGGCCGCGCACAACCTCGCGCG CGGGGCTCCGCAACGCGGCCGCAAGTCGGTTGCACGCTAG
Upstream 100 bases:
>100_bases CGCCGACGCCGCAGCTTCGGCGGCCAGCGCGCCGGTGGTGGCCATCGCGCAGCCCAGCAAGGTCGTGCAACTGCGTGCCG CGCATGCGCGCCAGGCGCCC
Downstream 100 bases:
>100_bases CCGCCACCCCGCTCAACCGCCGGTCTTGAACGCCGGCAACTGCTGCCCGAGCCGCGCGCCCATCTCCGCGCCGAGCGCCT GCAGCGCATTGAACGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MFRRGAAWRRAPRAGVCPVLVTSYRSSLVSPHAAGPGSPAGRRRKRQMIQYINLIRQGFDSLSYRPARLQRQVELVALRP VTCREREHPRTRMPAARLVEAAHNLARGAPQRGRKSVAR
Sequences:
>Translated_119_residues MFRRGAAWRRAPRAGVCPVLVTSYRSSLVSPHAAGPGSPAGRRRKRQMIQYINLIRQGFDSLSYRPARLQRQVELVALRP VTCREREHPRTRMPAARLVEAAHNLARGAPQRGRKSVAR >Mature_119_residues MFRRGAAWRRAPRAGVCPVLVTSYRSSLVSPHAAGPGSPAGRRRKRQMIQYINLIRQGFDSLSYRPARLQRQVELVALRP VTCREREHPRTRMPAARLVEAAHNLARGAPQRGRKSVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13448; Mature: 13448
Theoretical pI: Translated: 12.58; Mature: 12.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRGAAWRRAPRAGVCPVLVTSYRSSLVSPHAAGPGSPAGRRRKRQMIQYINLIRQGFD CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLSYRPARLQRQVELVALRPVTCREREHPRTRMPAARLVEAAHNLARGAPQRGRKSVAR HCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MFRRGAAWRRAPRAGVCPVLVTSYRSSLVSPHAAGPGSPAGRRRKRQMIQYINLIRQGFD CCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLSYRPARLQRQVELVALRPVTCREREHPRTRMPAARLVEAAHNLARGAPQRGRKSVAR HCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA