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The map label for this gene is yagI [H]

Identifier: 107022276

GI number: 107022276

Start: 778012

End: 778836

Strand: Reverse

Name: yagI [H]

Synonym: Bcen_0720

Alternate gene names: 107022276

Gene position: 778836-778012 (Counterclockwise)

Preceding gene: 107022277

Following gene: 107022275

Centisome position: 23.64

GC content: 70.42

Gene sequence:

>825_bases
GTGTCGACAACTGTAACCTCTCCCGCGTCGCGGGACCGTGAATCGTCGCCCGACGAGATCACCGCCCTCGCCCGCGGCCT
CGCCGTGCTGCGCCGCATCGCGGCTGCCGACGCCCCCGTCAGCAATCGCGAACTGACCGAATTGACCGGCATCCCGAAGC
CGACCGTCTCGCGCATCACCGCGACGCTCGTCAGCGCCGGCTTCCTGTTCCAGTTGCCCGACAGCGAGCGCTTCGTGCTG
ACCGCGTCGGTGCTCGAACTGAGCCACGGCTTCCTGCGCAACTTCGACATCCGCGCGCGTTCGCGGCCGTTCATGATCGA
ACTGGCCGAACGCACGTCGCTGTCCGTGCACCTCGCGGTGCGCGACCGGCTCGACATGGTCGCGATCGACGTGATCCGCC
CACGCTCGGCCGTGCTCGTCACGCGCCTCGAGATCGGCTCGCGGATGGACATCGCGCGTACGGCGGTGGGGCGCGCGTAC
CTCGCCGCGCTCGAGGACGACGAGCGGCGGCAACTGCTCGAGTCGCTGCGCACCACGGCCGGCGACGACTGGCCGCACGT
GTCCGCTCGCCTCACGCCCGCGCTCGACGAAGCGATGCGCGACGGCCACGCGATCGCGATCGGCGAATGGCGCGAGGGCC
TGAATGCGGTCGCCGCCGGGTTCGTCGGCCCGTCCGGTCAACGCTATTCAGTGAATTGCGGCGGCGCGGCGCACCAGTGT
CCGCCCGAATGGCTGCGGGAACAGGTGGTGCCGGCGCAGCAGGAATGCATCGCGAAAATCACCCGCGAAATCGGCGGCGC
GCCGGCCCGGCGCGTCGGCGTGTAA

Upstream 100 bases:

>100_bases
ATCGAATGACCGGTTCACCCGCGGAACATGCATCCTTTGACAATAGTCCTACAATACCAACAAAATTGAAATCGAGTTTC
GGAATTAGAGAGAATCCCTC

Downstream 100 bases:

>100_bases
TCGTTTCGTCATCGCCGTGTCGCGTTCTGTAACGACCGTAACCCGTTGAAAGATAGACCGCTGGACTGTAACGGGGACGG
CACGTAGGATCATGCCCATC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSTTVTSPASRDRESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRITATLVSAGFLFQLPDSERFVL
TASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAY
LAALEDDERRQLLESLRTTAGDDWPHVSARLTPALDEAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGAAHQC
PPEWLREQVVPAQQECIAKITREIGGAPARRVGV

Sequences:

>Translated_274_residues
MSTTVTSPASRDRESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRITATLVSAGFLFQLPDSERFVL
TASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAY
LAALEDDERRQLLESLRTTAGDDWPHVSARLTPALDEAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGAAHQC
PPEWLREQVVPAQQECIAKITREIGGAPARRVGV
>Mature_273_residues
STTVTSPASRDRESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRITATLVSAGFLFQLPDSERFVLT
ASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAVRDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYL
AALEDDERRQLLESLRTTAGDDWPHVSARLTPALDEAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGAAHQCP
PEWLREQVVPAQQECIAKITREIGGAPARRVGV

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=235, Percent_Identity=26.8085106382979, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1786468, Length=201, Percent_Identity=26.865671641791, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082359, Length=175, Percent_Identity=27.4285714285714, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI145693096, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29808; Mature: 29677

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTVTSPASRDRESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRIT
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHH
ATLVSAGFLFQLPDSERFVLTASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAV
HHHHHCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEE
RDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYLAALEDDERRQLLESLRTTA
CCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GDDWPHVSARLTPALDEAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGAAHQC
CCCCCCCHHCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PPEWLREQVVPAQQECIAKITREIGGAPARRVGV
CHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHCCC
>Mature Secondary Structure 
STTVTSPASRDRESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRIT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHH
ATLVSAGFLFQLPDSERFVLTASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAV
HHHHHCCEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEE
RDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYLAALEDDERRQLLESLRTTA
CCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
GDDWPHVSARLTPALDEAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGAAHQC
CCCCCCCHHCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PPEWLREQVVPAQQECIAKITREIGGAPARRVGV
CHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]