| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is plcN [H]
Identifier: 107022243
GI number: 107022243
Start: 734002
End: 736251
Strand: Reverse
Name: plcN [H]
Synonym: Bcen_0687
Alternate gene names: 107022243
Gene position: 736251-734002 (Counterclockwise)
Preceding gene: 107022244
Following gene: 107022242
Centisome position: 22.35
GC content: 68.89
Gene sequence:
>2250_bases ATGCTCGCGGCGGCATGCACCGGCGCAGCCGCATCCTGCGACCCGGTGCGCGCCCTTCCCGCAGGTCCCGCCAATCGGCT CCCTCTTTACCCCACGATAACGACCATGACCCGATCGAACCGTCGTGACTTCCTGCGCGTCGCCGCCGGCACTGCCGGCG CCGCCGCGCTGAACCTGTTTCCGCCCGTGATCCGGGATGCGCTCGCGATTCCCGCGAACCGCCGCACCGGCACGATCCGC GACATCGAACACATCGTGATCCTGATGCAGGAGAACCGCTCGTTCGACCACTACTTCGGCACGATGCGCGGTGTCCGCGG CTTCGGTGACCCGCGCCCGTTGCGCCTCGCGAACGGCAAGTCGGTGTTTCACCAGCCGGTCGGCCCGGCCGAACTGCTGC CGTTCCACCCGGGCGTCGACAAGCTCGGCCTGCAGTTCCTGCAGGACCTGCCGCACGGCTGGCAGGACATGCACGCCGCC TGGAACAAGGGCCGCTACGACCAGTGGGTGCCGAACAAGGGCACCACGACGATGGCGTACCTGAAGCGCGACGACATCCC GTTCCACTATCAGCTCGCCGACGCGTTCACGATCTGCGACGCATACCACTGCGCGATCCCGAGCTCGACCGACCCGAACC GCTACTACATGTGGACGGGCTACGTCGGCAACGACGGCACGGGCGGGGGTCCGGTGCTCGGCAACGAGGAAAAGGGCTAC GGCTGGACGACCTATCCGGAAGTGCTCGAACAGGCCGGCGTGTCGTGGAAGATCTACCAGGACGTCGGCACGGGGCTCGA CGCGAACGGCTCGTGGGGCTGGACGCAAAACCCGTACATCGGCAACTACGGCGACAACTCGCTGCTCTACTTCAACCAGT ACCGCTCCGCGCTGCCCGGCACGCCGCTGTACGACAAGGCGCGCACCGGCACCAACATCAGCGCCGGCGGCACGCTGTTC GACGTGCTGCAGCAGGACGTGAAGAACGGCACGCTGCCGCAGGTGTCGTGGATCTGCGCGCCCGAAGCGTATTCCGAGCA CCCGAACTGGCCGGCGAACTATGGCGCGTGGTACATCGAGCAGGTGCTGAAGGCGCTCGTGTCGAATCCCGACGTGTGGA GCAAGACCGCGCTGTTCATCACGTACGACGAAAACGACGGCTTCTTCGATCACGTGCCGCCGCCGTTCGCGCCGCAGTCG CGCGAGAACGGGCTGTCGACGGTCGCGACGACCAACGAGGTGTTCGCCGGCGACGCGTCGCACATGGCCGGCCCTTACGG GCTCGGGCCGCGCGTGCCGATGCTGGTCGTGTCGCCGTGGACCAAGGGCGGCTGGGTCTGCTCGCAGACCTTCGATCACA CGTCGCTGCTGCAATTCATCGAGGCGCGCTTCGGCGCGCAGTATCCGGTCACGGCCGCCAACGTGTCGCCGTGGCGCCGC GCGGTGTGCGGCGACCTGACGTCGGCGTTCGAGTTCGCGACCGCGGACGCCGCATGGCCGACGCTGCCCGACACCAGCGG CTACGCGCCGCCCGACCGCGTGCGCCATCCCGACTACATCCCGGTGCCGCCGGTGCTGCAGAAGCTGCCGAAACAGGAAG CCGGGCTGCGTCCGGCGCGCGCTCTGCCGTACGAGCTGTTCGTGCACGGCCGCGTCGAAGCCGCCAACGGCCAGTTCCGG CTGACCTTCGCGAACACGGGCCGGGCGGGCGCCGCGTTCCAGGTCCAGTCGCGCAACCGCGTCGACGGCCCGTGGGCGTA CACGGTCGAAGCCGGCAAACGTATCGCCGATACGTGGAGCGCCGCCGCATCGCTCGGCCTGTACGACCTCGACGTATACG GCCCGAACGGCTTCTACTGCCATTTCCGCGGCCCGTTCGCGACCGGGGTCGGCAGCGCGGACGTGAACCCCGAGGTGATC TACGGCTACGACGTCGCGAACGGCAACATCACGCTGCGCCTGATGAACCGCGGCCACAAGGCCGTGCGGCTCAAGGTCAC GAACGCGTACGGCCACGGTCACGCGCGCACGTTCGACCTCGCGCCGGGCGCGCACGTCGACGATTACTGGGACCTGCGCG GCAGCCACGGCTGGTACGACCTCACCGTCAGCGACGGCCGCCTGCTCGGCTTCCTGCGCCGCTTCGCCGGCCACGTCGAA ACGGGCCGCCCGAGCACCAGCGACCCGCTGATCCGCACGACCGCGTCGCACGACGACGCCGAAGCCGCGTCGGACGCCCT GTCCGACTGA
Upstream 100 bases:
>100_bases TTTCCCGTTGCAGCCGACCTGCTGACGCCGCATCCCGATGCCGGTCCGCTGCCCGTGCAAACGTTTCCGGACTTCACATG AATGACACCGATTCCTCGCT
Downstream 100 bases:
>100_bases CGTCGACCCACGCGCGGCGCGGCCCTTCTGACGGGCCGCGCCGCGTTTTTGCCCGCACCGCCCCTCTTCTCTGCGCCCGT TGCGTTCGCGACGGGAAACT
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MLAAACTGAAASCDPVRALPAGPANRLPLYPTITTMTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIR DIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAA WNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGY GWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWTQNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLF DVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQS RENGLSTVATTNEVFAGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRR AVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVRHPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFR LTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRIADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVI YGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE TGRPSTSDPLIRTTASHDDAEAASDALSD
Sequences:
>Translated_749_residues MLAAACTGAAASCDPVRALPAGPANRLPLYPTITTMTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIR DIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAA WNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGY GWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWTQNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLF DVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQS RENGLSTVATTNEVFAGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRR AVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVRHPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFR LTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRIADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVI YGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE TGRPSTSDPLIRTTASHDDAEAASDALSD >Mature_749_residues MLAAACTGAAASCDPVRALPAGPANRLPLYPTITTMTRSNRRDFLRVAAGTAGAAALNLFPPVIRDALAIPANRRTGTIR DIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGKSVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAA WNKGRYDQWVPNKGTTTMAYLKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGY GWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWTQNPYIGNYGDNSLLYFNQYRSALPGTPLYDKARTGTNISAGGTLF DVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIEQVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQS RENGLSTVATTNEVFAGDASHMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRR AVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVRHPDYIPVPPVLQKLPKQEAGLRPARALPYELFVHGRVEAANGQFR LTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRIADTWSAAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVI YGYDVANGNITLRLMNRGHKAVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE TGRPSTSDPLIRTTASHDDAEAASDALSD
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 82016; Mature: 82016
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAAACTGAAASCDPVRALPAGPANRLPLYPTITTMTRSNRRDFLRVAAGTAGAAALNLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCCEEEEECCCCCHHHHHHH PPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGK HHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCC SVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAY HHEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE LKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGY EECCCCCEEEEHHHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC GWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWTQNPYIGNYGDNSLLYFNQYRSALPG CCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCC TPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHH QVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQSRENGLSTVATTNEVFAGDAS HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCHH HMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRR HCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH AVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVRHPDYIPVPPVLQKLPKQEAGLRPAR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCHHHHCCCCHH ALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRIADTWS CCCEEEEEEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHH AAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVIYGYDVANGNITLRLMNRGHK HHHHCCEEEEEEECCCCEEEEECCCHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCE AVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE EEEEEEEECCCCCCCEEEECCCCCCCCCHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCC TGRPSTSDPLIRTTASHDDAEAASDALSD CCCCCCCCCEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure MLAAACTGAAASCDPVRALPAGPANRLPLYPTITTMTRSNRRDFLRVAAGTAGAAALNLF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCCEEEEECCCCCHHHHHHH PPVIRDALAIPANRRTGTIRDIEHIVILMQENRSFDHYFGTMRGVRGFGDPRPLRLANGK HHHHHHHHCCCCCCCCCCHHCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCC SVFHQPVGPAELLPFHPGVDKLGLQFLQDLPHGWQDMHAAWNKGRYDQWVPNKGTTTMAY HHEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEE LKRDDIPFHYQLADAFTICDAYHCAIPSSTDPNRYYMWTGYVGNDGTGGGPVLGNEEKGY EECCCCCEEEEHHHHHHHHHHHEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCC GWTTYPEVLEQAGVSWKIYQDVGTGLDANGSWGWTQNPYIGNYGDNSLLYFNQYRSALPG CCCHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCC TPLYDKARTGTNISAGGTLFDVLQQDVKNGTLPQVSWICAPEAYSEHPNWPANYGAWYIE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHH QVLKALVSNPDVWSKTALFITYDENDGFFDHVPPPFAPQSRENGLSTVATTNEVFAGDAS HHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCHH HMAGPYGLGPRVPMLVVSPWTKGGWVCSQTFDHTSLLQFIEARFGAQYPVTAANVSPWRR HCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCHHHH AVCGDLTSAFEFATADAAWPTLPDTSGYAPPDRVRHPDYIPVPPVLQKLPKQEAGLRPAR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCHHHHCCCCHH ALPYELFVHGRVEAANGQFRLTFANTGRAGAAFQVQSRNRVDGPWAYTVEAGKRIADTWS CCCEEEEEEEEEEECCCEEEEEEECCCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHH AAASLGLYDLDVYGPNGFYCHFRGPFATGVGSADVNPEVIYGYDVANGNITLRLMNRGHK HHHHCCEEEEEEECCCCEEEEECCCHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCE AVRLKVTNAYGHGHARTFDLAPGAHVDDYWDLRGSHGWYDLTVSDGRLLGFLRRFAGHVE EEEEEEEECCCCCCCEEEECCCCCCCCCHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCC TGRPSTSDPLIRTTASHDDAEAASDALSD CCCCCCCCCEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]