| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is livK [C]
Identifier: 107022242
GI number: 107022242
Start: 732482
End: 733867
Strand: Reverse
Name: livK [C]
Synonym: Bcen_0686
Alternate gene names: 107022242
Gene position: 733867-732482 (Counterclockwise)
Preceding gene: 107022243
Following gene: 107022240
Centisome position: 22.28
GC content: 64.86
Gene sequence:
>1386_bases ATGCGCAAATCCGCATCGAATGCGCGACAAATTTCCAAGACCCGCGCATATCGGCGACCTATATATCGAAGCAATCGGGG CTCTTCGCGGAGCCTGACGGGAGATGTTTCCGAGGATCACGATGCCGACCTCCCCGCCCGATTCCGAGAAGCGGTCGAAC CGCCCGCCCGTCGCACGCGTCCGGCCCGCCCAGGCGCGCGCGGTACCCACTCGCCGGTGTCGAACAAGAGGAACAACATG AAATTCCGTCATTCCCTGCTGTCGGTGTCGATTGCATCCGCGCTTGCCCTTCTGTCGCAACAGGCTGCCCAGGCCGCCGA CACAACCGACGTGAAGGTCGGCTTCGCCGCGCCGCTCACGGGCGTGAACGCCGGCTACGGCAAGGACCTGCAAAACGGCG TGCAGCTCGCGCTCGACGATGCAGCCGCGCAGAAAGTGCAGATCGCCGGCAAGCCTGCCCGCTTCAATCTCGTCGTGCAG GACGACCAGGCCGACCCGCGCATCGGCGTGCAGGCCGCGCAGGCACTGGTCGACCAGAACGTGTCGGTCGTGGTCGGTCA CTTCAATTCGGGGACGACGATTCCGGCGTCGGTGGTCTACGACAAGGCCGGCATTCCGGTGATCGACCCGGCCGCGACCA ACCCGACGCTCACGTCGCGCGGGCTCGCGAACATGTTCATGGTGATCGCGACCGATGGCCAGAATGCCGGCAACGCGGGC AAGTACGCGGTCGAGGTGACGAAGGCGAAGCGCATCGCGATCATCGACGACCGCACCGCGTTCGGCCAGGGCGAAGCCGA CGAATTCGAGAAGGCCGTGAAGGCCGCCGGCGGCAACCTCATCGGTCGCGAGTTCACCAGCAACCAGGCGGTCGATTTCC GCGCGCAGATCACGAGCCTGAAGGCCAAGAATCCCGACCTGATCTTCTTCGGCGGCCTCGATTCGCTCGCCGCCAACTTC ATCAAGCAAATGCGTCAACTCGGGCTGAACGCGCAATTCGTCGGCGGCGGCGGCGTGAAGGACAACGAGTTCATCAAGAT CGCGGGGCCGGCCGCCGAAGGCGCGATGGCGTGGGAATACGGTCAGCCGCTCGACGAGCTGCCGCAGGGGAAGGATTTCG AGGCGCGCTTCAAGAAGCGCTTCGGCGTCGACGTGCTGTCGTATGCGCAGTTCGGCTATGACGCGGCGTGGGCGGCGATC AAGGCGATGCAGGCGGCCGGTTCGACCGATCCGAAGGCCTATCGCCCGGCGCTGAAGAAAATCGACTTCCCAGGCGTGAC CGGCCGCATCTCGTTCGCGAACGACGGCTCGCTGAAGAGCGGGATGTCGACGCTGTACCAGGTGAAGAACGGCGCGTGGA AGACGATCGTGACGAAGGGAGGCTGA
Upstream 100 bases:
>100_bases GCCGCGCCGCGTTTTTGCCCGCACCGCCCCTCTTCTCTGCGCCCGTTGCGTTCGCGACGGGAAACTCCCGATACCGGCCG CCCGCGCACGCGCGGAAGCT
Downstream 100 bases:
>100_bases TCGGCGAGAGGGGCGGCCGGCGGCGGGAACGCCGTCTGGCCGCGGAGATCGAGACGATTGCGCCGATCTCGTATGACGAC TGATGTTAAAACAATGCCAG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MRKSASNARQISKTRAYRRPIYRSNRGSSRSLTGDVSEDHDADLPARFREAVEPPARRTRPARPGARGTHSPVSNKRNNM KFRHSLLSVSIASALALLSQQAAQAADTTDVKVGFAAPLTGVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPARFNLVVQ DDQADPRIGVQAAQALVDQNVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPTLTSRGLANMFMVIATDGQNAGNAG KYAVEVTKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLIGREFTSNQAVDFRAQITSLKAKNPDLIFFGGLDSLAANF IKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEYGQPLDELPQGKDFEARFKKRFGVDVLSYAQFGYDAAWAAI KAMQAAGSTDPKAYRPALKKIDFPGVTGRISFANDGSLKSGMSTLYQVKNGAWKTIVTKGG
Sequences:
>Translated_461_residues MRKSASNARQISKTRAYRRPIYRSNRGSSRSLTGDVSEDHDADLPARFREAVEPPARRTRPARPGARGTHSPVSNKRNNM KFRHSLLSVSIASALALLSQQAAQAADTTDVKVGFAAPLTGVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPARFNLVVQ DDQADPRIGVQAAQALVDQNVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPTLTSRGLANMFMVIATDGQNAGNAG KYAVEVTKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLIGREFTSNQAVDFRAQITSLKAKNPDLIFFGGLDSLAANF IKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEYGQPLDELPQGKDFEARFKKRFGVDVLSYAQFGYDAAWAAI KAMQAAGSTDPKAYRPALKKIDFPGVTGRISFANDGSLKSGMSTLYQVKNGAWKTIVTKGG >Mature_461_residues MRKSASNARQISKTRAYRRPIYRSNRGSSRSLTGDVSEDHDADLPARFREAVEPPARRTRPARPGARGTHSPVSNKRNNM KFRHSLLSVSIASALALLSQQAAQAADTTDVKVGFAAPLTGVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPARFNLVVQ DDQADPRIGVQAAQALVDQNVSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPTLTSRGLANMFMVIATDGQNAGNAG KYAVEVTKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLIGREFTSNQAVDFRAQITSLKAKNPDLIFFGGLDSLAANF IKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEYGQPLDELPQGKDFEARFKKRFGVDVLSYAQFGYDAAWAAI KAMQAAGSTDPKAYRPALKKIDFPGVTGRISFANDGSLKSGMSTLYQVKNGAWKTIVTKGG
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=349, Percent_Identity=32.378223495702, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI48994941, Length=355, Percent_Identity=30.1408450704225, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 49064; Mature: 49064
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSASNARQISKTRAYRRPIYRSNRGSSRSLTGDVSEDHDADLPARFREAVEPPARRTR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCC PARPGARGTHSPVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAADTTDVKVGFAAPLT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC GVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPARFNLVVQDDQADPRIGVQAAQALVDQN CCCCCCCCCHHHCCEEEECHHHHHEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC VSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPTLTSRGLANMFMVIATDGQNAGNAG CEEEEEECCCCCCCCHHEEECCCCCCEECCCCCCCCCHHCCCCEEEEEEEECCCCCCCCC KYAVEVTKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLIGREFTSNQAVDFRAQITSL CEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEHHHHHHHH KAKNPDLIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEY CCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCEEECC GQPLDELPQGKDFEARFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKAYRPALKK CCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH IDFPGVTGRISFANDGSLKSGMSTLYQVKNGAWKTIVTKGG CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure MRKSASNARQISKTRAYRRPIYRSNRGSSRSLTGDVSEDHDADLPARFREAVEPPARRTR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCC PARPGARGTHSPVSNKRNNMKFRHSLLSVSIASALALLSQQAAQAADTTDVKVGFAAPLT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC GVNAGYGKDLQNGVQLALDDAAAQKVQIAGKPARFNLVVQDDQADPRIGVQAAQALVDQN CCCCCCCCCHHHCCEEEECHHHHHEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHCCC VSVVVGHFNSGTTIPASVVYDKAGIPVIDPAATNPTLTSRGLANMFMVIATDGQNAGNAG CEEEEEECCCCCCCCHHEEECCCCCCEECCCCCCCCCHHCCCCEEEEEEEECCCCCCCCC KYAVEVTKAKRIAIIDDRTAFGQGEADEFEKAVKAAGGNLIGREFTSNQAVDFRAQITSL CEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEHHHHHHHH KAKNPDLIFFGGLDSLAANFIKQMRQLGLNAQFVGGGGVKDNEFIKIAGPAAEGAMAWEY CCCCCCEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCCEEECC GQPLDELPQGKDFEARFKKRFGVDVLSYAQFGYDAAWAAIKAMQAAGSTDPKAYRPALKK CCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHH IDFPGVTGRISFANDGSLKSGMSTLYQVKNGAWKTIVTKGG CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA