| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is ygaZ [C]
Identifier: 107022173
GI number: 107022173
Start: 663311
End: 664153
Strand: Reverse
Name: ygaZ [C]
Synonym: Bcen_0617
Alternate gene names: 107022173
Gene position: 664153-663311 (Counterclockwise)
Preceding gene: 107022174
Following gene: 107022172
Centisome position: 20.16
GC content: 70.58
Gene sequence:
>843_bases GTGAGCACCGGCCCCGCTCCGGCGGGCGCAAGAACATACAAGCCGGCTCGCCGCCGGCCCGCTATCCTCCCGCTCATGGA GGAGCGCTTCTTGAACAAGACACCCGCATCACCCCCGCGCCGCCCGCTCAACGAATGGCTCGACGGCGCGCGCGACACGA TCCCGATGATGATCGGCGCCGCGCCGTTCGGCGTGATATTCGGCACGCTCGTCGGCGGCGGTCCGCTCGCCGCGTGGCAC GGCGCACTGATGTCGCTCGCCGTGTTCGCGGGCTCCGCGCAATTCATCGCGCTCGGCCTGATCGCCGGCAGCGCCAGTTT CGTCGTCGTGCTCGCCACGACGCTGATCGTGAACCTGCGTCACCTGCTGTACAGCGCGACGCTCGCGCCCTATGTCGCCC ACCTGCCGCTGCGCTGGCGCGCGACGCTCGGCGCGTTGATGACCGACGAGGTGTTCGCGGTCGCCTACGGCCACTACCGG CACTACCCGCCCGGTACGATCGGCCCCCACTACTTTTTCGGCTCCGGGCTCGCGATGTACCTGAACTGGCAGGTCTGGAC GCTCGCGGGCATCGGCTTCGGCGCGGCGTTCCCGGGCCTGCAGTCGCTCGGCCTCGATTTCGCGATGGCGGCGACCTTCA TCGCGATCGTCGTCCCGCAGCTCGGCACGCTGCGCTATTTCGCGGCGGCCGCCACGGCCGGCACGCTCGCGTACTTCTGG CAGAGCTGGCCGTACAAGCTCGGGCTGCTCGGCGCGGTCGCCGCCGGCGTCGCGATCGGCGTCGTGCTCACGCTGCGGCA CGATCGCACGCGCGCCAACGCTCGTTCGGAGGCCGCATCGTGA
Upstream 100 bases:
>100_bases TTCAAACGGATGTTCGGCGTGCCGCCCGGGCGCTGGCAGGCAAGCTGACGCGCGGCATCCCGCCATCGCCGGCCGCGCCG CGCCCCGTGCCGGCCGGCAC
Downstream 100 bases:
>100_bases GCTACGCGCTGTTGATCCTCGGGATGGCCGTCATCACGTATGCGATCCGCTCGACGCTGTTCCTGTTCGGCGAGCGGCTG ACGTTCCCGCCGCTCGTGCG
Product: AzlC-like
Products: NA
Alternate protein names: Branched-Chain Amino Acid Permease; Branched-Chain Amino Acid Transport Protein AzlC; AzlC Protein; AzlC-Like; AzlC-Like Protein; Amino Acid Permease; AzlC Family Branched-Chain Amino Acid Transporter; Branched-Chain Amino Acid Transporter; Branched Chain Amino Acid ABC Transporter; Azaleucine Resistance Protein AzlC; Branched-Chain Amino Acid Permease Protein; Branched-Chain Amino Acid Permease AzlC; Branched Chain Amino Acid Efflux Pump LivE; Branched-Chain Amino Acid Exporter LIV- E Family; LIV-E Family Branched Chain Amino Acid Exporter; Branched Chain Amino Acid Exporter Family Protein; Integral Membrane Protein; AzlC Family Transmembrane Protein; AzlC-Like Family Protein; Branched-Chain Amino Acid Transporter Protein; Azlc Family Protein; Branched-Chain Amino Acid Permease AzlC Family Protein; Transport Protein-Like Protein; Branched Chain Aminoacid Transporter; Branched Chain Amino Acid ABC Transporter Permease; Inner Membrane Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSTGPAPAGARTYKPARRRPAILPLMEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWH GALMSLAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYR HYPPGTIGPHYFFGSGLAMYLNWQVWTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFW QSWPYKLGLLGAVAAGVAIGVVLTLRHDRTRANARSEAAS
Sequences:
>Translated_280_residues MSTGPAPAGARTYKPARRRPAILPLMEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWH GALMSLAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYR HYPPGTIGPHYFFGSGLAMYLNWQVWTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFW QSWPYKLGLLGAVAAGVAIGVVLTLRHDRTRANARSEAAS >Mature_279_residues STGPAPAGARTYKPARRRPAILPLMEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGAAPFGVIFGTLVGGGPLAAWHG ALMSLAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLRHLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYRH YPPGTIGPHYFFGSGLAMYLNWQVWTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFWQ SWPYKLGLLGAVAAGVAIGVVLTLRHDRTRANARSEAAS
Specific function: Unknown
COG id: COG1296
COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29740; Mature: 29609
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGPAPAGARTYKPARRRPAILPLMEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGA CCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHCC APFGVIFGTLVGGGPLAAWHGALMSLAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLR CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHEEHHCCHHHHHHHHHHHHHHHH HLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEE LNWQVWTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFW EEEEEEEEECCCHHHHCCCHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH QSWPYKLGLLGAVAAGVAIGVVLTLRHDRTRANARSEAAS HCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHCHHCCCC >Mature Secondary Structure STGPAPAGARTYKPARRRPAILPLMEERFLNKTPASPPRRPLNEWLDGARDTIPMMIGA CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHCC APFGVIFGTLVGGGPLAAWHGALMSLAVFAGSAQFIALGLIAGSASFVVVLATTLIVNLR CHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHEEHHCCHHHHHHHHHHHHHHHH HLLYSATLAPYVAHLPLRWRATLGALMTDEVFAVAYGHYRHYPPGTIGPHYFFGSGLAMY HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEE LNWQVWTLAGIGFGAAFPGLQSLGLDFAMAATFIAIVVPQLGTLRYFAAAATAGTLAYFW EEEEEEEEECCCHHHHCCCHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH QSWPYKLGLLGAVAAGVAIGVVLTLRHDRTRANARSEAAS HCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA