| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022172
Identifier: 107022172
GI number: 107022172
Start: 662976
End: 663314
Strand: Reverse
Name: 107022172
Synonym: Bcen_0616
Alternate gene names: NA
Gene position: 663314-662976 (Counterclockwise)
Preceding gene: 107022173
Following gene: 107022171
Centisome position: 20.13
GC content: 69.91
Gene sequence:
>339_bases GTGAGCTACGCGCTGTTGATCCTCGGGATGGCCGTCATCACGTATGCGATCCGCTCGACGCTGTTCCTGTTCGGCGAGCG GCTGACGTTCCCGCCGCTCGTGCGAACCGCGCTCGCCTTCGTGCCGGTCACCGTGCTGACCGCGATCATCGTGCCGATGA CCGTCTCGCCGCACGGCGGCACGGCCGAGCTGACCTGGCGCAATCCGCAGCTCGTCGGCGCACTCGCGGCCGTGCTCGTG TCAGCCGCGACCCGCCGCCCGCTCGTGACGATCGCGGCCGGGCTCGTGGTGTTCTTCCTGTGGCAAGGGGTCGTCCTCCC GCACTGGCCGGCTACCTGA
Upstream 100 bases:
>100_bases TCGGGCTGCTCGGCGCGGTCGCCGCCGGCGTCGCGATCGGCGTCGTGCTCACGCTGCGGCACGATCGCACGCGCGCCAAC GCTCGTTCGGAGGCCGCATC
Downstream 100 bases:
>100_bases GCGCACGCTCCATCGCGCGCGCTCAAGTTTCCGCCCGGTGCGCCGATATAGGAGAGGAAGACCCGCCACCGGCCCCGGCG CGCACCGGTCAGTCGACGCT
Product: branched-chain amino acid transport
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALAFVPVTVLTAIIVPMTVSPHGGTAELTWRNPQLVGALAAVLV SAATRRPLVTIAAGLVVFFLWQGVVLPHWPAT
Sequences:
>Translated_112_residues MSYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALAFVPVTVLTAIIVPMTVSPHGGTAELTWRNPQLVGALAAVLV SAATRRPLVTIAAGLVVFFLWQGVVLPHWPAT >Mature_111_residues SYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALAFVPVTVLTAIIVPMTVSPHGGTAELTWRNPQLVGALAAVLVS AATRRPLVTIAAGLVVFFLWQGVVLPHWPAT
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12011; Mature: 11879
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALAFVPVTVLTAIIVPMTVSPHGG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TAELTWRNPQLVGALAAVLVSAATRRPLVTIAAGLVVFFLWQGVVLPHWPAT EEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SYALLILGMAVITYAIRSTLFLFGERLTFPPLVRTALAFVPVTVLTAIIVPMTVSPHGG CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC TAELTWRNPQLVGALAAVLVSAATRRPLVTIAAGLVVFFLWQGVVLPHWPAT EEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA