| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107022171
Identifier: 107022171
GI number: 107022171
Start: 662033
End: 662815
Strand: Reverse
Name: 107022171
Synonym: Bcen_0615
Alternate gene names: NA
Gene position: 662815-662033 (Counterclockwise)
Preceding gene: 107022172
Following gene: 107022169
Centisome position: 20.12
GC content: 66.92
Gene sequence:
>783_bases ATGGGCCAGATCACCCTTTCCCTCAAGGACGACACGCTCGAGTCCCTGCGCAAGGACTACGACGCGTTCGTCCGCGTGTC GCTGAAACTCGACCCGCAATTCGCGACGCCGTCGTTCGAGGATTTCCTGCGCGCCAAGCTGCTCGACAACATGGTGCCGC TCACCGAGCACGCCGTGCAGCGGATGCTGCAGGGCGGCCAGTACGCGTGGGCCAAGCGCACGCTCGACAAGGAATTTCCG GACGTCGTCGCGATCCTGATGCGGCAGGCCGGCGAATTCGGCTTCGGCTTCGCGTCGCGCTCCGAATGGACGCCCGACGA ACTCGCGAAGGCGTGCCGCGACTGGGCGAAGGCGATCGTCGCCGAAGCGCAGGGCGATGCGTCGCTGATCGACCCGCTCG CGTCGCAGATCAAGGGCGCCGCGCAGGACATCCAGACGCTCGAGGAACTGATGCAGACGCCTGCGTGGCGGCTCGCGGAA TCGCTGCGACAGCGGATCTACGAGGCCAAGCTCGCGTGCGAGATGAGCGTCGGCAGCATTGCCCGCGACAAGCTCGGCGA ACTGCGCGGACTGCTGCGGCTCGGGCTCGCGCACGGCTCGTTCCAGAAGCAGGAAGCGCAGCAGATCATGGAATACCTGC GGCTGCTGAAGCCGGAGATCTTCGTCGAGGAACCGTACGACGTCTTCGCGCGGCTCGCCGCATGGCTGCGCAGCGTGTTC ACCCCTGCTGCCGTGCGGCCGCCGCAGGGGCAGGGACAAGGGCAAGGACAACGCCGGCCGTAA
Upstream 100 bases:
>100_bases ACCCGCCACCGGCCCCGGCGCGCACCGGTCAGTCGACGCTGCGCCCGCCCCGGTGCGCCGTGCCGACGCCGGCTTGCGCG CCCCCCCCTCGAGACGATTC
Downstream 100 bases:
>100_bases GCACGCGTCCCGCTGAACGCATCACCTGATGAAAATGGCCCGGTTCGCGCGAAGCGAACCGGGCCGCCGGATGATCGCCC GTCGCGACGCGCCGTCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MGQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQRMLQGGQYAWAKRTLDKEFP DVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIVAEAQGDASLIDPLASQIKGAAQDIQTLEELMQTPAWRLAE SLRQRIYEAKLACEMSVGSIARDKLGELRGLLRLGLAHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF TPAAVRPPQGQGQGQGQRRP
Sequences:
>Translated_260_residues MGQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQRMLQGGQYAWAKRTLDKEFP DVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIVAEAQGDASLIDPLASQIKGAAQDIQTLEELMQTPAWRLAE SLRQRIYEAKLACEMSVGSIARDKLGELRGLLRLGLAHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF TPAAVRPPQGQGQGQGQRRP >Mature_259_residues GQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQRMLQGGQYAWAKRTLDKEFPD VVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIVAEAQGDASLIDPLASQIKGAAQDIQTLEELMQTPAWRLAES LRQRIYEAKLACEMSVGSIARDKLGELRGLLRLGLAHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVFT PAAVRPPQGQGQGQGQRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29240; Mature: 29109
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQ CCEEEEEECHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHH RMLQGGQYAWAKRTLDKEFPDVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEAQGDASLIDPLASQIKGAAQDIQTLEELMQTPAWRLAESLRQRIYEAKLACEMSVGSI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARDKLGELRGLLRLGLAHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH TPAAVRPPQGQGQGQGQRRP CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GQITLSLKDDTLESLRKDYDAFVRVSLKLDPQFATPSFEDFLRAKLLDNMVPLTEHAVQ CEEEEEECHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHH RMLQGGQYAWAKRTLDKEFPDVVAILMRQAGEFGFGFASRSEWTPDELAKACRDWAKAIV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH AEAQGDASLIDPLASQIKGAAQDIQTLEELMQTPAWRLAESLRQRIYEAKLACEMSVGSI HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH ARDKLGELRGLLRLGLAHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDVFARLAAWLRSVF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHH TPAAVRPPQGQGQGQGQRRP CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA