| Definition | Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008060 |
| Length | 3,294,563 |
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The map label for this gene is 107021970
Identifier: 107021970
GI number: 107021970
Start: 455814
End: 456638
Strand: Reverse
Name: 107021970
Synonym: Bcen_0412
Alternate gene names: NA
Gene position: 456638-455814 (Counterclockwise)
Preceding gene: 107021971
Following gene: 107021969
Centisome position: 13.86
GC content: 68.73
Gene sequence:
>825_bases ATGACGTCCCCTGATTGCCCGCCCCCGCTCGACGACGTGGCCGTGCTGATGCCGGCCTACAACGGGCACGACGACGTCGT CCGGACCCTCGCGTCGTTTCGCGAGGACGCGCCCGTGCACGTGCTGATCGTCGACGACGGCAGCACGCCGCCGATCGTCG CGCCCGACCTGCCGGGCCTCGCGATCGACGTGCTGCGCATGCCCCAGAACGGCGGCATCGAACGCGCACTGGCGGCCGGC ATCGACGCGCTCGCGGCCCGCGGGTTCCGCTACGCGGCCCGCATCGATGCCGGCGATCTCGCCGTGCCGCAGCGCTTGGC GAAAGAACGCGCCTATCTCGACGCCCATCCGCGCGTCGCCTGCGTCGGCATGTGGACGCAGGTCGTGTCGCGCGCCGGCG AGCCGCGTTTCATGCTGATGCCGCCCGCCGATCCGCGCACGCTGCGCCGCACGCGCTTCCTGCGCTCGCCGCTCGTGCAT CCGTCTGTGATGTTGCGCATCGACGCCGTGCGCGAAGTGGGCAACTATCGGGCGAAGTACCGCGCGGCCGAGGATCTCGA TCTTTTTTTACGGTTAATGCAACGCTACGATTGCGCGAACCTGCCGGAACTCGGCCTGTATTACGAGCTTAACGAGGGCG GGATCAGCGCGACCAAGCGCCGGCGCCAGCTGGTGTCGACGCTCACGCTGCTGCTGCGCCACTTCAACGTGCTGAACCCG TACGACTGGGCCGGCCTCGCCAAGAACCTGCTGCATTTCGTGACGCCGTACCGTACGCTGCAGCGCATCAAGCAGACGCT GTTCGCCGCGCGACCGTCCGCCTGA
Upstream 100 bases:
>100_bases TCCCGCGGCTCGGCCTGTACGGCGCGCTCGTCGGGCTGGCGGCCGGCTACCTCGCCGCCGCCGCCGTCAACTTTTATTAC ATCCGTTTCAAGCTGCGAAC
Downstream 100 bases:
>100_bases CGCGCACCCGGCCCCGTTCGCCCATTTCGACGCTTTATTTTTTCTTTTTTTCATGGCCGCCACCTCCCCGCTGCGCATCG CGCTCGTCTGCAACACGGCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Family 2 Glycosyl Transferase; Group 2 Family Glycosyltransferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTSPDCPPPLDDVAVLMPAYNGHDDVVRTLASFREDAPVHVLIVDDGSTPPIVAPDLPGLAIDVLRMPQNGGIERALAAG IDALAARGFRYAARIDAGDLAVPQRLAKERAYLDAHPRVACVGMWTQVVSRAGEPRFMLMPPADPRTLRRTRFLRSPLVH PSVMLRIDAVREVGNYRAKYRAAEDLDLFLRLMQRYDCANLPELGLYYELNEGGISATKRRRQLVSTLTLLLRHFNVLNP YDWAGLAKNLLHFVTPYRTLQRIKQTLFAARPSA
Sequences:
>Translated_274_residues MTSPDCPPPLDDVAVLMPAYNGHDDVVRTLASFREDAPVHVLIVDDGSTPPIVAPDLPGLAIDVLRMPQNGGIERALAAG IDALAARGFRYAARIDAGDLAVPQRLAKERAYLDAHPRVACVGMWTQVVSRAGEPRFMLMPPADPRTLRRTRFLRSPLVH PSVMLRIDAVREVGNYRAKYRAAEDLDLFLRLMQRYDCANLPELGLYYELNEGGISATKRRRQLVSTLTLLLRHFNVLNP YDWAGLAKNLLHFVTPYRTLQRIKQTLFAARPSA >Mature_273_residues TSPDCPPPLDDVAVLMPAYNGHDDVVRTLASFREDAPVHVLIVDDGSTPPIVAPDLPGLAIDVLRMPQNGGIERALAAGI DALAARGFRYAARIDAGDLAVPQRLAKERAYLDAHPRVACVGMWTQVVSRAGEPRFMLMPPADPRTLRRTRFLRSPLVHP SVMLRIDAVREVGNYRAKYRAAEDLDLFLRLMQRYDCANLPELGLYYELNEGGISATKRRRQLVSTLTLLLRHFNVLNPY DWAGLAKNLLHFVTPYRTLQRIKQTLFAARPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30588; Mature: 30457
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPDCPPPLDDVAVLMPAYNGHDDVVRTLASFREDAPVHVLIVDDGSTPPIVAPDLPGL CCCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCC AIDVLRMPQNGGIERALAAGIDALAARGFRYAARIDAGDLAVPQRLAKERAYLDAHPRVA EEHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE CVGMWTQVVSRAGEPRFMLMPPADPRTLRRTRFLRSPLVHPSVMLRIDAVREVGNYRAKY HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH RAAEDLDLFLRLMQRYDCANLPELGLYYELNEGGISATKRRRQLVSTLTLLLRHFNVLNP CCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC YDWAGLAKNLLHFVTPYRTLQRIKQTLFAARPSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSPDCPPPLDDVAVLMPAYNGHDDVVRTLASFREDAPVHVLIVDDGSTPPIVAPDLPGL CCCCCCCCHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCCCCCC AIDVLRMPQNGGIERALAAGIDALAARGFRYAARIDAGDLAVPQRLAKERAYLDAHPRVA EEHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEE CVGMWTQVVSRAGEPRFMLMPPADPRTLRRTRFLRSPLVHPSVMLRIDAVREVGNYRAKY HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH RAAEDLDLFLRLMQRYDCANLPELGLYYELNEGGISATKRRRQLVSTLTLLLRHFNVLNP CCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC YDWAGLAKNLLHFVTPYRTLQRIKQTLFAARPSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA